KEGG   Micropterus salmoides (largemouth bass): 119885698
Entry
119885698         CDS       T07309                                 
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
  KO
K07375  tubulin beta
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04145  Phagosome
msam04540  Gap junction
msam04814  Motor proteins
msam05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:msam00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119885698 (tubb1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    119885698 (tubb1)
  09142 Cell motility
   04814 Motor proteins
    119885698 (tubb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119885698 (tubb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:msam03036]
    119885698 (tubb1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:msam04812]
    119885698 (tubb1)
   04147 Exosome [BR:msam04147]
    119885698 (tubb1)
Chromosome and associated proteins [BR:msam03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     119885698 (tubb1)
Cytoskeleton proteins [BR:msam04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    119885698 (tubb1)
Exosome [BR:msam04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   119885698 (tubb1)
  Exosomal proteins of colorectal cancer cells
   119885698 (tubb1)
  Exosomal proteins of bladder cancer cells
   119885698 (tubb1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_2 Tubulin_3
Other DBs
NCBI-GeneID: 119885698
NCBI-ProteinID: XP_038551820
LinkDB
Position
Unknown
AA seq 473 aa
MREIVHLQIGQCGNQIGSKFWEVISEEHGLNATGIYEGDSELQLERVNVYFNEAHGGKYV
PRGILVDLEPGTMDSVRGSRIGALFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVIDRV
RNESESCDCMQGFQLVHSLGGGTGSGMGTLIINKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLLENTDMTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTPRGSQQYRALTVPELTQQMFDARNMM
TACDPRRGRYLTVAGIFRGRMSTKEVDEQMLAIQQKNSSYFVDWIPHNVKVAVCDIPPRG
LKMSSTFIGNNTAIQEIFRRVGEQFSLMFRRKAFLHWYTGEGMDEMEFTEAEGNLNDLVS
EYQQYQDATADLDSEAEEEEVEGPSSTVTTKVQSRMEVKLETVTETSKDTVDE
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgcgtgaaattgtacatctgcaaattggacaatgtggcaaccagatcggctcaaagttt
tgggaagtgatcagtgaagaacatgggctcaacgctacaggcatctatgagggagacagc
gagctccaactggagagggtcaacgtctacttcaatgaggcacatggtggtaaatatgtc
cccaggggcattcttgttgacctggagcctggtacaatggacagtgtaagaggaagccgc
atcggggccctttttaggccagacaacttcatccatgggaactcaggcgctgggaataac
tgggcgaagggccactacacagagggagcggagctggtggagcaggttattgacagagtg
aggaacgagagtgaaagctgtgattgcatgcagggttttcagctggttcactcgctgggg
ggtggcactggctctggcatgggaaccctcatcattaacaagatccgagaggagtaccct
gaccgcatcatgaacaccttcagcgtcgtgccctcccctaaagtctccgacacagtggtg
gagccctacaacgccaccctgtcagtgcaccagctcctggagaacacagacatgaccttc
tgcatcgacaacgaggccctctacgacatctgtttccgcactctgaaactgacgacaccg
acttacggggacctcaaccacttggtctccatgaccatgagtggggtcacgacctctctg
agattccccggacagctcaacgccgacctgaggaagctggctgtcaacatggtgcctttc
cctcgcctccacttcttcatgccaggctttgcccccctgacgccccgcggcagccaacag
tatagagccctcactgtgcctgaactcactcaacagatgtttgatgctcgcaacatgatg
acggcgtgcgacccaaggcgggggcgctacctcacggttgctggcatcttccgtggccgg
atgtccaccaaagaggtagatgaacagatgcttgcaatccagcagaaaaacagctcatac
tttgtggactggatccctcataacgtcaaggttgccgtgtgtgacatcccaccccgaggc
ctcaaaatgtcctccaccttcatcggcaacaacacggccattcaggagatattccgccgt
gtgggtgagcagttctccctgatgttcagacggaaggcttttctccactggtatacaggg
gaaggtatggatgaaatggagttcactgaggcagagggcaacctcaatgacctggtgtcg
gagtaccagcagtaccaagacgccactgctgatctagattcggaagcagaggaagaagaa
gtagagggaccctcatcaacagtgacaacaaaagttcagtctcggatggaagttaaactg
gaaacagtgactgaaacgagcaaagacactgtggatgagtag

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