Micropterus salmoides (largemouth bass): 119886005
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Entry
119886005 CDS
T07309
Symbol
grin2aa
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A isoform X1
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04020
Calcium signaling pathway
msam04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119886005 (grin2aa)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119886005 (grin2aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119886005 (grin2aa)
Ion channels [BR:
msam04040
]
Ligand-gated channels
Glutamate (ionotropic)
119886005 (grin2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
ComGE
Motif
Other DBs
NCBI-GeneID:
119886005
NCBI-ProteinID:
XP_038552368
LinkDB
All DBs
Position
Unknown
AA seq
1550 aa
AA seq
DB search
MQGMKWFGSMSLSSKRSKRRSRRSSSCSSGSGNNSVLLSLALLVAVTLIVDPVAAQKQRT
GGASEKVPVLNIAVILGRTRYISDRDIRALWSKEDPIDVNVVTLLVNETDPKSIITHMCD
LMSGTKIHGVVFGDGTDQEAIAQILDFMSSQTLIPILGIHGGSSMIMADKDVKSTFFQFG
ASIQQEALLMLNIMEEYDWHIFSIVTSKFPGYQEFINVLKTTVDNSFVGWDLQNIIILDA
VEEDSRSQIMLKKVQSPVVLLYCSKDEAVYVLEEARSLGLTGFGYIWIVPSLTTGNPEIT
PDEFPPGMISVSYDDWDYPLEARVRDGLGIITSAAAAMLEEFGDIPEAKTSCYGQLEKTT
KLPPSALHKYMMNVTWDGKDLSFTEDGYQENPKLVVIVLNKEREWEKMGKLDNRSLTLKY
PVWPRFNSFGDAELDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSVPCRKHIKDNTTEA
GGTYIKKCCKGFCIDILKKIAKYVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKKAVM
AVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLL
VTAMAVFMFEYISPLGFNRNLAQGKDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTS
KFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPN
GSTERNIRKNYPAMHQYMVKYHQTGVQDALVSLKTGKLDAFIYDAAVLNYMAGRDEGCKL
VTIGSGYIFATTGYGIALQKGSYWKRQVDLAILAIIGDGEMEELEAQWLTGICHNEKNEV
MSSQLDVDNMAGVFYMLATAMGLSLITFVSEHLFYWRLRYCFTGVCTGKPGLLFSISRGI
WSCIHGVHIDMKKKTDLDFSPQDKMLKLIKSAKQMTNMSNLGGSRMNSPKREFMHSAGPM
IMDMMAEKGNFIYADNRSYAPKDMIYGDTGDLQSYLANRHKDHLNNYIFQGGQHPLTLND
ANPNTVEVAVTADTVQTNAKPPRTLWKKSVDTLRSVPPGPPPMPDMLMPDPRMSMKTQRY
IPEDTAHSDISDCSSRAASYKDPENNKHLKPKDNLKKRSVPSKYPRDCSEVELSYLKTKQ
VSGGTNQTGRGGGGEKIYTIDSDRELSLHSDPIHYRESRGLAADDLDYPEIYSDHSDNYR
KCEQPIIHLNSSPLHHTDSDLLPDPTYSKHYSLKEKNLSPHESIDRYKQTHCRSCLSKVP
ASYPPGGPYTPTASASASATRSPYNRCEACLHMANLYDITEDQLLSDPLVSPTMHHQQQQ
QPDEMFGLYWPQTDGPHVQKRNRLRLSRQHSFDNIMLEKPKDVDLGRPARSVSLKEKDRF
LDSTSDSHYANLFGMRPYSGRLFGTGSKSMLFNHNLEESKRSKSLYPAHGSDNPFLSHSL
RDDTSSRLVHGRSSSDIYKQLAVASPAAVLGAPPIKTRNDANNLRSSVKSTTSYCSRDGR
IANDMYNKEHVMPYSANKTSAYPAPRGVLNSAQFSNRRVYKKIPSLESDV
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggatgaagtggtttggcagtatgtccctcagcagcaaaaggagtaagaggagg
agtagaaggagcagcagctgtagcagtggcagtggtaataatagtgtgctgctatccctg
gctctcctggtggcggtgaccctgattgtggaccctgtagcggcacaaaagcagcgaact
ggcggcgcttcagaaaaagtgccagtcctgaacattgcggtgatcctgggacgcacacgc
tacatctcagaccgggacatccgagcgctgtggagcaaggaggaccccatcgacgtcaac
gtggtcaccctgctggtcaacgagaccgacccgaaaagcatcatcacccacatgtgtgat
ttgatgtccgggactaagatccatggcgtggtgtttggggatggcactgaccaagaggcc
atagcccagattttggattttatgtcctcgcagacactcatacccatcctgggcattcat
ggagggtcgtccatgatcatggctgataaggatgtaaagtcgacattcttccagtttggt
gcctccatccaacaggaggctctgttgatgctcaacatcatggaggaatacgattggcac
atcttctccattgtcacgtcaaagttccctggctaccaggagttcatcaacgtcctaaaa
actactgtggacaacagttttgtgggctgggatctgcagaatatcattattctggacgca
gtggaggaagacagccggtctcagatcatgctcaagaaggtccagtccccagtggtcctg
ctctactgctccaaggatgaggcggtctacgtcctggaggaggctcgctcactcggcctc
actggatttggatacatctggattgtgccatcactcaccactgggaacccagaaataaca
cctgacgagtttccaccaggaatgatttcagtgtcatacgacgactgggactacccgttg
gaggctcgggttcgggatggtctgggaatcataacgtcagcagcagcagccatgttggag
gagtttggtgacatccctgaagccaagacttcctgttatggccaattggagaagacgacc
aagctgccacccagtgcgctacataagtacatgatgaatgtgacatgggatggcaaagac
ttgtcattcacagaagacggctaccaggaaaacccaaagctggtggtcattgttctcaac
aaggagagagagtgggagaagatggggaaattggacaaccgcagcctgacacttaagtac
ccagtgtggccgcgcttcaactcctttggtgacgctgagctggacgacaaccacctgtcc
atcgtcactttagaggagaaaccttttgttattgtggaggacgtagaaaggctcaccggt
acctgcatgaggaactctgtgccctgcaggaagcatatcaaagacaacacgacagaggct
ggtgggacatacatcaagaagtgctgcaaaggcttctgcatcgatattctgaagaagatt
gcaaagtatgtaaagttcacctatgacctgtacctggtaaccaatggcaagcatggcaag
aagatcaacaacgtgtggaatgggatggtgggagaggtggtctataagaaagccgtcatg
gccgtcggatctctgacgatcaatgaggagcgttctgaggtcatcgatttctccgtcccg
ttcgtggaaaccgggatcagcgtcatggtctcccgtagcaacggaacagtctccccgtca
gcctttctcgagccattcagtgcatcagtgtgggtgatgatgtttgttatgctcctactg
gtgactgcaatggctgtcttcatgtttgagtacatcagtcctcttggttttaacagaaac
ctggcacaaggaaaagacccccatggcccttccttcaccatgggcaaggccgtgtggctg
ctgtggggtctggtcttcaacaactctgtgccagtgcaaaacccaaaaggaaccaccagt
aagttcatagtgtctgtgtgggccttcttcgctgtcatcttcctggcctcctacactgcc
aacctggctgccttcatgatccaggaggagtttgtcgaccaggtcaccgggctttctgac
aacaagtttcagaacccgtacgcatactcacctccgtttcgctttgggactgttccaaac
ggatccacagagaggaacattaggaagaactaccctgcaatgcaccaatacatggtgaaa
tatcatcagactggagtccaggacgcacttgtcagcctcaaaacgggtaaactggatgcc
tttatctatgatgctgcagtgttgaactacatggccggcagagatgagggatgtaagctg
gtgaccattggcagcgggtacatctttgctaccactggttatggcatagctctacagaaa
ggctcctactggaaacgacaggtggatctggctatcctggccatcatcggagatggtgaa
atggaggaactagaagcccagtggctgacaggaatttgccacaatgagaagaacgaggtt
atgtccagtcagctggatgtggacaacatggctggagtcttctacatgctggccacggcc
atggggctctccctcatcacctttgtctctgagcatctcttctactggaggctcagatac
tgcttcactggggtctgcactggcaagccaggtctccttttctccatcagtcggggaatc
tggagttgcatccatggagtccacattgacatgaagaaaaagacagatctagactttagc
ccccaggacaaaatgcttaagctcatcaagtcagccaaacagatgaccaacatgtctaac
ctaggtggctcccgcatgaattcacccaaacgtgagttcatgcactcagctggccccatg
atcatggacatgatggcagagaaaggcaactttatttatgctgacaaccgaagctatgcg
cccaaagatatgatctatggggacactggtgacctgcagtcttatcttgctaaccgccac
aaagaccaccttaacaactacatctttcagggaggccaacatcctctgaccctgaatgat
gccaatcctaacacagtagaggtggcagtaactgctgacacagtccagacaaacgccaag
ccgcccaggaccctgtggaagaagtcagtggacacacttcgttctgtgccacccgggccc
cctccgatgcctgacatgctgatgccagacccacgaatgtcaatgaagacacagcgctac
atccctgaggacacagcccactctgacatctccgactgttctagcagggcagcctcctac
aaggacccagaaaacaacaagcacctgaagcccaaggacaacttaaaaaaaagatcggtg
ccgtcaaaatacccaagggactgcagtgaggtggagctgtcctacttaaagacaaagcag
gtcagcggtggaaccaaccaaaccgggagaggaggaggaggagagaaaatctacacaatc
gactcagaccgagagctgagcctgcactcagatcccattcattaccgcgagagtcgtggc
cttgctgctgacgatttggattatcccgagatctactccgaccacagtgacaactatagg
aagtgtgagcagccaatcattcatctgaactcctcgcctttgcatcacaccgactcagat
cttctaccagatccaacttactctaaacactacagcctgaaagaaaaaaacctttcccca
catgaatccattgatcgctacaaacagacacactgtcgttcctgcttgtccaaagtgcca
gctagctacccaccaggagggccgtacacccctaccgcctcggcctcagcttctgccaca
cgctcaccttataataggtgtgaagcatgcctccacatggccaacctgtatgacattact
gaggaccagctcctctcagaccccttggtcagtcccaccatgcaccaccaacagcagcag
caaccagatgaaatgtttggtctgtattggcctcagacggatggaccgcatgtccaaaag
agaaaccgcttgaggctgagtcgtcagcactcctttgataacatcatgctagaaaagccc
aaggatgtagacctgggccgacctgcgcgcagcgtcagcctcaaggagaaggatcgtttc
ctggactccacatctgactcgcactatgcgaacctcttcggcatgcgtccctactctggc
agactgtttggcacaggctccaagtcaatgctgtttaaccacaatctggaggaaagcaag
aggagcaagtccctgtatccggcccatggctcggacaaccctttcctcagccactcgctg
agggatgacaccagcagcagactggtccatgggcgtagctcctctgatatttacaaacag
ctggcagtggcctcacctgcagcagtccttggagcgccccccatcaaaacacgcaacgat
gcgaacaatctccgctcatccgttaaatccaccacttcatactgctcacgggacggacgg
atagccaatgacatgtacaataaagagcatgtgatgccttactcagccaataagactagt
gcatacccggccccacgtggcgtcctaaactcagcccagttcagcaatagacgggtgtat
aaaaaaatccccagtctggagtcagatgtttag
DBGET
integrated database retrieval system
