Micropterus salmoides (largemouth bass): 119886016
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Entry
119886016 CDS
T07309
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04010
MAPK signaling pathway
msam04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119886016 (cacna1ha)
04020 Calcium signaling pathway
119886016 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119886016 (cacna1ha)
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119886016 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Trm112p
Motif
Other DBs
NCBI-GeneID:
119886016
NCBI-ProteinID:
XP_038552388
LinkDB
All DBs
Position
Unknown
AA seq
2545 aa
AA seq
DB search
MTDGEGRARFQYAECPEGQEQEEVQEEVRLAIPTPYRKDTPGHDVDPGGGHDEEEEEEVE
REGRSSSGRCEGGEWSSEVQEHEDQEPELDVEVGPALGVRITAPIRDPDCVSEEEEQQPY
PALAPLAFFCLKQTTRPRNWCLRVVCNPWFEHVSMLVILLNCVTLGMFQPCEDVTCQSEW
CRILQVLDDCIFAFFAVEMVIKMVALGIFGPNCYLGDKWNQLDFVIVMAGVMEYSLDGHN
ASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLW
AGLLRNRCFLGEDIRTMYNLSISSYYMSEEGEDSPFICSAPRENGMLRCHDVPAYTEGGA
ECSLAASHQTSALIGSSPALGGASVNGCVNWNQYYNVCRPGDFNPHKGAVNFDNIGYAWI
AIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRE
NALMREQRARYMSNDSTLASYSEPGSCYEEMLRYISHLYRKLTRRLQRLYSGWHSKRRKK
VNPNGSGGGSNGGGNGHGHGSSRGCGGLGPGSALWLRPIHNLLQHHQHQHCRLSNGGQHT
ISVETTEHMDGERGVGGGEELEMKSLPVRRGSTNGNSSSGGGHPSGFTQGMGALLGRLNG
GMNYPTILPSFVCSYSSKTPPPHSQQCGPSPEQHPPNHPASEHTETLNKLHQLMGQHRRQ
RLLYQLAGVVPSPLLLELLSCPLCAHSLETLELELGDLEGGRGETDGLHDFPQGGDLRSG
RGRSRQRGVVEYKNGVVWAWRGFREKLKRIVESKYFNRGIMIAILVNTLSMGIEYHEQPE
ELTDVLEISNIVFTSMFVLEMGFMLLAFGLFGYIRNPYNIFDSIIVIISVWEIIGQADGG
LSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMHLFGC
KFSLETENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYFVALM
TFGNYVLFNLLVAILVEGFQAEGDANRSESDDEKKSDNFEEDEKVEQLRDTELKMYSLMM
TANGHVDPRGSMAPPIIMRTAATPMPTPKSSLGPESILGEEVTYGEGVPQYGEVGLGFSE
AGVGHAESRRGSSTSMEPLAYDQRSLSLSSPGRRSPLPPRSWGSRRSSWNSLGRAPSLKR
RDTSGERESLLSGEGGEDEDGGEDKGEASGKNRLRPLESLELLQASTLCPSIIAEYSDCN
GRTLTYDPNLNSDPKEDSSPEDDMDDDCTFCNWIKKELDNVKPRWCKEHEDWTLYLFSPE
SLLRAWCQSVISHKMFDHVVLVFIFLNCITIALERPAIQPDSTERVFLSVSNYVFTVIFL
AEMAIKVVALGFCFGKQSYLQSSWNILDGLLVFVSLVDILVSLASTGGNRILGILRVLRL
LRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCE
GLDTKNITNKSDCLQANYRWIRRKYNFDNLIQALMSLFVLSCKDGWVNIMYDGLDAVGVD
QQPVRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRLKM
IEKKRRKAKQRPYYADYSPLRLSIHTLCTSHYLDLFITFIICINVFTMSIEHYNQPQYLE
EVLKYCNYVFTCIFVIEALLKLTAFGIHRFFKDRWNQLDIAIVALSIMGITLEELKMSAA
LPINPTIIRIMRVLRIARVLKLLKMATGMRSLLDTVMQALPQVGNLGLLFMLLFFIYAAL
GVELFGKLDCNPNNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECHPEDR
HCLSYLPLVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIALEMAM
ERQRKLSTSSHNSSVAGTYVGPCPHSPEQEEEAQYGDQDLLSPRKMSVSRMHSLPNDSYM
FRPVRPASAPYPLEEVDLSPQHQHSGSVTSVHSQPCESRALLQVPDVSPIHPRPPPTLTL
TLPRIAPPTPSPSPRSLRRQVALKVDSVEYQGCEQQERPSPDILPPPSPSPLSPHTSSPS
PLPPPPPSSPSALSLPPCSPSAFPLPPPSPSPSRLPPLLSSPSSLPPPPSSPSLLLPPPP
SPRLPLRPPSLRRPRPPSAASLCDPADEEVYHITSSASHRWRAEEGGGQEIRGKAGRSHS
LSPYTTPYPLDSYSTSSPTHPPLPPSSSRSALSLLGAGLKDRDFRKGLSVDNQGFLDKPL
SLSAGNPDDQRRHSIEVCLPQAVITSDDQHFTREALRSERGGQAFPVRVQSVGGGHRKKK
MSPPCISIHPPSERENPQVASPPKLSDCSMMLRRRTPSYDLTPHTPSNTHTQDVSADSQM
HSPMHMVLTPIHVPLQAHSSTHTLTPSRASTPAPTQTYIPPHASTPTHPHIPISPNIFIQ
PHAPLVPNAMPFAQTHSLSPAARHSPHTGDYVPLPQFTFDQPQSRYMSGLSAGLSDADTA
TCSSPFDNRLGSSAGVSAKNRRTAQ
NT seq
7638 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagcacgctttcagtacgctgagtgcccggaggggcaggag
caggaggaagtgcaggaagaggtgaggcttgctataccgacgccctacaggaaggacacc
ccaggccatgatgttgaccctggaggaggccatgacgaggaggaagaggaggaggtggag
agggaggggaggagcagtagtggacggtgcgaaggaggagaatggagttctgaagttcag
gagcatgaagaccaggaaccggagctggatgtggaagttggtccagcattgggagttcgt
atcacagctccgattcgcgatccagactgcgtctctgaggaggaggagcagcagccgtac
ccggccctggccccgctggccttcttctgcttaaagcaaacaacaaggcctcgcaactgg
tgtcttcgcgtcgtctgtaacccatggttcgagcacgtatccatgctggtgatcctgctc
aactgtgtgactctggggatgttccagccatgtgaagacgtcacctgccagtcagagtgg
tgccgcatcctacaggtattggacgactgtatctttgctttctttgctgtggaaatggtc
atcaagatggtggccctgggaatattcggccccaattgttaccttggtgacaagtggaac
cagcttgactttgttatcgtcatggcaggggtgatggagtattctctggatggccataat
gcaagtctgtctgccatccgtaccgtccgagtacttaggccacttcgggccatcaacaga
gtaccaagtatgcggatcttggtgaccctgctgttggacacactgcccatgctgggaaat
gtgcttcttctctgcttctttgtctttttcatctttggcattgtgggagtccagctgtgg
gcggggctgctgcgcaaccgctgcttcctgggagaggacatcagaacaatgtacaacttg
tccataagttcttactacatgtctgaggaaggtgaagacagcccatttatctgctcggct
ccccgcgagaacgggatgctgcgctgccacgatgtgccggcctacactgagggtggggca
gagtgctcattggctgcttcccaccaaacttcagctctgattggatcttcccctgcgttg
ggcggggccagtgttaatggctgtgttaactggaaccagtactataatgtgtgtcgcccc
ggggacttcaaccctcacaagggagctgtcaactttgacaatattggctacgcgtggata
gccatattccaggtcatcacactggaaggatgggtagatatcatgtactatgtcatggat
gctcactccttctacaattttatatattttatactgctcattatcgtgggttctttcttc
atgatcaacttgtgcctcgtggtcatcgccacccagttctccgagacaaagcagagggag
aacgccctgatgagggagcagcgtgctcgctacatgtccaacgactccaccctcgccagt
tacagcgaaccgggctcatgctacgaggagatgctacgctacatcagtcacctttatcgc
aagttaacacgcagactccagaggttatactctggatggcacagtaaaaggcgtaaaaag
gtgaatcctaatggcagcggcggaggcagtaacggcgggggtaatggacacggccatggt
tccagcaggggctgtggtggcttaggtccgggtagtgcattgtggttgagaccgatccat
aaccttctgcagcaccatcagcaccagcactgccgcctcagcaacggagggcagcacacc
atcagcgtggaaaccaccgaacacatggacggagaaagaggggtaggaggaggggaggag
ctggagatgaagtcgcttcctgtaaggagagggagtactaatggaaatagcagcagtggc
ggcggccatccgtctggtttcacccaaggcatgggggcattgctcgggcgactgaacggg
gggatgaactatccgaccattctgccgtcgtttgtgtgcagctacagtagtaagacgccg
ccccctcactcccagcagtgtggtcccagtccagagcagcaccccccaaaccacccagca
tctgaacacacagagacactgaacaagctccaccagctcatgggacagcacagacgccag
aggctgctgtaccagctggccggcgtggtgcccagccctctgctcttggagctgcttagc
tgccctctgtgtgcccatagcctggagaccttggagctggaactgggagacctggaggga
ggcaggggagagactgacggactgcacgacttcccccaggggggggacctgagaagtggg
cgaggtcggagcagacagcggggggttgtggagtacaaaaatggagtggtttgggcctgg
agaggtttcagggaaaaactgaagaggattgtggaaagtaaatacttcaaccgagggatc
atgatcgctatcctcgtcaatactctcagcatggggattgagtaccacgagcagcctgaa
gagttgactgatgtgttagagatcagtaacatcgttttcaccagtatgtttgtcctggag
atgggtttcatgctgctggcctttggtttgttcggatacatcaggaacccatacaacata
ttcgacagcatcattgttatcatcagtgtgtgggagataattggtcaagcagacggaggg
ttgtcagtcctgcgaacatttcgtctcctgcgggttctgaagctggttcgcttcctgcct
gccctgaggagacaactggtagtgctcatgaagaccatggacaatgtggccaccttctgc
atgctgctgatgcttttcatcttcactttcagtatactgggtatgcacttgtttggctgt
aaattcagtcttgaaacagagaatggggacaccatccctgaccgcaagaactttgactct
ctactctgggccatcgtcactgtattccagattcttacccaagaggactggaatgtggtg
ttgtataacggcatggcctccacctctccatgggcagctctctactttgttgctctcatg
acatttggcaactatgtgctcttcaatttacttgtggcgatcttggttgagggcttccag
gctgagggtgatgctaatcggtcagagtcagatgatgagaagaaatcggacaactttgag
gaggatgagaaagtagaacagctcagagacacagagctaaaaatgtactctctgatgatg
acagccaacggtcacgttgaccctcgtggctcgatggctcctcccataatcatgcgcacg
gcagccacacccatgcccactcccaagagctctctggggcctgagtctatccttggagag
gaggtgacgtatggagaaggcgtgcctcaatatggcgaggtgggactgggcttttccgag
gcaggagttggtcatgcagagtctcgccgtggaagctccacctccatggagcctttagcc
tatgaccagcgttctctgagcctctcaagtcccggccggcgttcccctcttcctccccgc
tcatggggaagccgtcgctccagctggaacagcctgggaagagcgccgagcctcaagagg
agagacaccagcggagagagggagagcctgttgtctggggagggaggagaggacgaagat
ggtggggaggacaagggagaggccagtggaaaaaaccgactacggcccttggagtccttg
gagctgctgcaggcgtctactctctgtccttctataatagcagagtatagtgactgtaac
gggaggaccctgacctatgaccccaacttgaactctgaccccaaggaagactcctcgcct
gaggacgacatggatgatgactgtactttctgcaactggatcaaaaaagagcttgataac
gtgaagccccgctggtgcaaagagcatgaagactggacgctgtatttgttctctccagag
agcctattacgtgcgtggtgccaaagcgtgatctctcacaagatgttcgaccatgtggtt
ctggttttcatcttcctcaactgcatcaccatcgctctggaaagacctgctatacagcct
gacagcacggagcgagtgtttctgagtgtgtccaactacgttttcactgtgatcttccta
gcagagatggccattaaggttgtagctctcggtttctgctttgggaagcagagctacctc
cagtccagctggaacattctagatggtttgttggtgtttgtgtctctggtcgacattctg
gtctctctggcctctactggcggaaacaggatcctgggcatcctcagagtcctacgcctg
ctacgaacactacgcccactgagggtaatcagccgagccccgggactgaagctagttgtc
gagacgctcatcacctctctcagacccattgggaacattgtccttatctgttgcgctttc
ttcattgtctttggcatcttgggggtgcagctgttcaaaggcaagttctaccactgtgaa
ggtctggacaccaaaaacatcaccaacaagtctgactgtctgcaggccaactatcgctgg
atacgaaggaagtacaactttgacaacctgattcaggctctgatgtctttgtttgtgctg
tcctgtaaggacggctgggtcaacatcatgtacgacgggcttgatgcggtgggggtggac
caacagcctgtaaggaaccacaacccctggatgctgctgtacttcatctccttcctactc
atcgtcagcttcttcgtcctcaatatgtttgtcggggtcgtggtggagaacttccacaag
tgccggcaggaccaggaagaggaagaggctcgcttacgggaagagaagaggctcaaaatg
atagagaaaaagcgcaggaaggccaagcagaggccttactatgcagactactctcccctg
cgtctgtccatccacacactgtgtaccagccactacctggacctcttcatcaccttcatc
atctgcatcaatgtcttcaccatgagcattgagcactacaatcagccacagtatttagag
gaggtcctgaagtactgtaactacgtctttacctgcatcttcgtgatcgaggccctgctc
aagcttacggcattcggcatacacaggttcttcaaagacaggtggaatcagctggatata
gctatagtggcgttgtccatcatgggcatcaccctggaggagctgaaaatgagcgcagca
ctgcccataaatcctaccataatcagaatcatgagagtactcagaatagcacgagtgctg
aaacttctaaagatggccacggggatgagatctctgctggatactgtcatgcaagcgctg
ccacaggtgggaaatcttggtctcctcttcatgctgctcttcttcatctacgctgcgctg
ggagtggagctgttcggcaaactggattgcaatcccaacaacccatgtgagggtctgagc
cgtcacgcaacctttgagaattttgggatggccttcctcacgctgtttcgagtgtccact
ggagacaactggaatgggattatgaaagacacactaagggagtgtcatccagaagaccgc
cactgtctctcctacctgcctttggtctctccaatttactttgtcacctttgtgctcatg
gcccagtttgtgctggtcaacgtggtggtggctgttttaatgaagcatctagaggaaagc
aacaaggaagctaaagaggatgcagagatggatgcagagatcgccttggaaatggctatg
gagaggcaacgcaaattaagcacaagctcccacaacagttcagtagcagggacctatgtt
gggccatgtccccattcacctgagcaggaggaagaggcgcagtacggtgaccaggacctg
ctgtcaccaaggaagatgtctgtatccaggatgcactctctgccgaatgacagctacatg
ttccgacctgtgcggcctgccagcgccccctaccctttggaggaagtagatctcagtccc
cagcaccagcattcaggctcagtgacgtcggtccactcccagccatgtgagagtcgcgca
ctgctgcaggtaccagacgtttccccgattcaccctcggccacctcccaccctcaccctc
accctgccccgcattgccccgcccacgcccagcccctccccacggtccctgcgcagacag
gtggcacttaaagtggactctgtggagtaccagggttgtgagcaacaggagaggcccagc
cctgatatactgcctcccccctctccttctcccctctctcctcatacatcctccccatct
cccctgccccctccacctccctcctccccctcagccctttctctcccaccctgctcccct
tctgccttccctctccctcctccctctccctctccctctcgtctaccccctctactgtcc
tccccctcttccctacctcctccgccatcttccccctcgcttcttctccctccgcctccc
tccccccgcctccccctgcgccctcccagccttcggagacctaggccgccctctgctgcc
tccctctgcgaccctgcagatgaggaggtgtatcacatcaccagctcagccagccacagg
tggagagctgaggagggaggagggcaggagataagagggaaggccggccgcagccactcc
ctctccccctacaccaccccataccctctagattcctactccacttcctcccctactcat
cccccgctaccaccttcctcctcgaggagcgcgctcagtctgcttggggcgggattgaag
gaccgtgactttaggaagggtcttagcgttgacaaccagggcttcctggacaagccatta
tcattgtctgctggtaatcctgatgatcagcgccgccactcaatagaagtctgcctccca
caagctgtgatcaccagtgatgaccaacactttacacgtgaggccctgcggtcagaaagg
ggtggtcaggcattccctgtgagggtgcagtcagtcgggggcggccacagaaagaagaag
atgagtcctccttgtatatccatccacccgccctcagagagggaaaacccccaagtcgct
tcgcccccgaaactgtctgactgcagcatgatgctgagacgcaggacaccgtcctatgac
ttgaccccgcacacaccgtcaaacacgcacacgcaagacgtctcggcagattcacagatg
cactccccgatgcacatggtgctcacacccatccatgtaccactgcaagcacactcatca
acacacacactgacaccctcgcgggcatctactccagcacccactcagacatacattcca
ccacatgcatccacacccacacacccacacatcccgatcagcccaaacatcttcattcag
cctcatgcacctctggtcccaaatgcgatgcctttcgcacagacacactccctctcccct
gctgcaaggcactcccctcacacaggagactacgtccccctccctcagttcaccttcgac
caaccacagtccagatacatgagtggcctgtcagctggcctatcagatgctgatacagcc
acctgctcttcccctttcgacaacagactgggaagcagtgcaggagtcagtgcaaagaac
cggaggaccgcccaatga
DBGET
integrated database retrieval system
