Micropterus salmoides (largemouth bass): 119891230
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Entry
119891230 CDS
T07309
Name
(RefSeq) neurogenic locus notch homolog protein 1-like isoform X1
KO
K02599
Notch 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119891230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
NOD
Notch
NODP
Ank_3
Ank_5
Ank_4
EGF_3
DL-JAG_EGF-like
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
119891230
NCBI-ProteinID:
XP_038558548
LinkDB
All DBs
Position
Unknown
AA seq
2518 aa
AA seq
DB search
MHIFFVKLTFLLSLIALTRGLTCSMPTESCLNGGRCEATPGGNGECKCRDGYVGSKCQFR
DPCTTSPCMNGGTCRAVSKGSTMDFNCTCRLGYTDRRCLTPINNVCISSPCRNGGTCELE
SLETFKCHCPPGWSGKLCQQADPCASNPCANGGQCSAIESHYICTCTPFFFGKTCKQDIN
ECDVNPSPCKNGGACINDVGGYRCQCPQEYTGKNCESRYLPCNPSPCYNGGTCIQKGETS
YECSCVPGFTGKNCNHNIDDCPGHDCQNGGTCVDGVNTYNCQCKPEFTGQLCTEDVDECQ
LMPNACQNGGTCHNIYGSYQCVCVNGWSGDDCSENIDDCASAACHQGSTCHDRVASFYCE
CPHGRTGLLCQLDDACISNPCQKGSNCDTNPVNGNHFCTCPSGYYGASCDQDVDECSLGS
NPCEHAGKCINTMGSFQCKCQQGYVGPRCELDINECMSNPCMNEATCLDQIGDFHCICMP
GYEGEFCEIDTDECANSPCLNNGKCIDKINAFHCQCPTGFTGNLCQIDIDECASTPCKNG
AKCTDGPNKYTCDCTEGYTGKHCETDINECYSDPCHYGTCIDGLASFSCHCNPGYTGRLC
ETNINECLSQPCRNGGTCQDRENAYICSCPKGTTGINCEINIDDCKSSPCDYGTCIDKIN
GYECACEPGYTGTMCNINIDECAINPCHNGGTCIDGINSFTCVCPEGYHDATCFSQVNEC
FSNPCIHGHCDDKINGYKCLCDSGWSGENCDINNNECESNPCMNGGTCKDMTSGYVCTCL
MGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCILPYTGENCETLMAPCSTKPCKH
EGMCQESEDYQSFSCVCPEGWQGQTCEVDIKECVKNPCRNGATCQNTLGSYRCGCKPGFT
GRHCETNLDDCKPNPCSNGGLCKDEVNGFLCTCLPGFRGTKCEEDINECESNPCKNGANC
TDCVNSYTCTCPPGFSGIHCENNTPDCTESSCFNGGSCVDGINTFTCLCPPGFTGSYCQH
DINECDSKPCLNGGTCQDSYGTYKCTCPHGYTGLNCQNLVRWCDSSPCKNGGSCWQRGTT
YSCECETGWTGLYCDVPSVSCEVAAKQRGVDVAHLCRNSGQCLDAGNVHYCHCQVGYTGS
YCEEQVDECTPNPCQNGATCTDFLGGYTCKCMPGYVGTNCSDEINECFSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINMDDCNPFTDPVTKEPKCFNKGKCVDRVGGYHCICPAGYV
GERCEGDVNECLSNPCDPRGTHSCIQLTNNYRCECRTGYTGQRCDTVFDGCKGKPCRSGG
TCAVASNTPHGFICKCPPGFTGSTCEYDAQACGSLHCRNGGTCISGHKSPKCLCTPSFTG
PECQYPTDSPCNSNPCYNGGTCEYTSEAPYYHCVCPTNFNGLRCHILDYNFDGGFGHDIP
PPTEVEVTCNIPQCEEAKHNKFCDVLCNNHACGWDNGDCSLNFNDPWKNCSASLQCWRYF
NDGKCDSQCDNAGCLYDGFDCQNLEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLAVGHLVLVVHINPEQLLNNSFGFLRELSRVLRTNVIFSKDAKGEMMVYPYY
GSEHELKKYVKRSVDTWAEVPGKVLNVVKRSLDDVAGGSRRMRRELDHLQIKGSVVHLEV
DNRQCFQQSTECFQSTDDAAAFLGALASSGKLDVPYTIEAVYSGVDHQYPPDYLIYLVLG
SVGILAFLGVGMVAARKRRHEHGRLWLPEGFKTTETSKKKRREPVGEDSVGLKPLKNISD
ISLMDDAQNEWEEDEPSDAKRFRQFDEQAVLEVDDQTDHRQWTQQHLDAADLRIPSIAPT
PPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDASANVINDFIYQGANL
HNQTDRTGETALHLAARYARSDAAKRLLEASADANIQDNMGRTPLHAAVAADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADVNAIDDFGKSALHWAAAVNN
VEAAIVLLKNSANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANREITDHMDRLPRDI
AQERMHHDIVRLMDEYNLVRSPHMHGGSLSTTLSPPLCSPNGYLGNMKQPQPQGQGQGKK
ARKPSAKGIGCKDGKDMKVKKKNSQDGKSGNLLDSSAVLSPVDSLESPHGYVSDVASPPM
MTSPFQQSPSVSLNHLQGMSDPHLSVNHMVMPNKQELARMQFDPLPPRLTHLPVSGSSGQ
APINGQCDWLSRMHGSLNQPGQFNPMRGAPGGQGSLHQGGQHGMMTSLHNSHPTTSLSQM
MNYQGIQSTRLGPQPHIMQQQAQQMQQMQNLQQLQQQQQQQQSIQLQHQNSNATSSQNFI
GGELTSPELQQGTSNSSMPIHTILPQETQIMPSSINQSMPSTQFLTPPSQHSYSGPMDNT
PNHQVQVPDHPFLTPSPGSPDHWSSSSPHSNMSDWSEGISSPPTSMQSQIGHIPEQFK
NT seq
7557 nt
NT seq
+upstream
nt +downstream
nt
atgcatattttctttgtgaaactaactttcttgttgtcgctgatagcactaacacgaggt
ctaacatgctccatgcccacggagtcgtgtttgaatggcgggaggtgtgaagcaactcca
ggcggcaatggagagtgcaagtgccgggatggatacgtaggaagcaagtgccagtttcgt
gacccgtgcaccacctcgccatgcatgaacggtggcacgtgtcgtgccgtgtccaagggg
agcacgatggactttaactgcacctgcagactaggctacaccgaccgccgctgccttaca
cccatcaacaatgtgtgtatcagctcaccgtgtcgcaatggaggcacctgcgagcttgaa
agtcttgagaccttcaagtgccactgcccgcctggatggtcaggtaaactgtgtcaacaa
gccgacccctgtgcctcaaatccatgtgccaacggtgggcagtgctccgccattgagtcc
cactacatctgtacctgcacgcctttcttctttggaaagacctgcaaacaggacatcaat
gagtgtgatgtgaacccgtcgccctgcaagaatggtggggcgtgcatcaatgacgtcggt
ggctacagatgccagtgcccgcaggagtatacaggcaagaactgcgaaagccgctacctt
ccctgcaacccatcgccctgctataatggaggcacctgcatccagaagggagagaccagc
tacgaatgctcctgtgtgccaggtttcacagggaaaaactgtaaccataacattgatgac
tgtccaggtcatgactgccagaatggagggacatgtgtagatggagtcaacacctacaac
tgccagtgtaaaccagaatttacaggtcagctgtgcacagaggatgttgatgaatgccag
ctgatgcccaacgcctgccaaaatggcggcacgtgtcacaacatctacggcagctaccag
tgtgtgtgtgtgaatggctggtctggggacgactgcagtgaaaacatagatgactgtgcc
agtgctgcatgccaccaaggatccacctgtcatgaccgcgtagcttctttctactgcgaa
tgcccccatggccgcacaggactgctgtgccagctggatgatgcctgcatcagcaaccct
tgtcagaaaggctccaactgtgacaccaaccctgtcaatggaaatcacttctgtacctgc
ccatcaggatactatggagcttcctgcgatcaggatgttgacgagtgctcacttggttcc
aacccatgtgagcatgcagggaagtgtataaacaccatggggtcgttccagtgtaagtgc
caacagggttacgtgggaccgcgctgcgagctggacatcaacgagtgcatgtcgaacccg
tgtatgaatgaggccacatgcctggaccagataggagacttccactgtatctgcatgcca
ggttacgaaggggagttctgcgagatcgatacggacgaatgtgccaacagcccctgcctg
aacaacggcaagtgtatcgacaagatcaacgccttccactgccagtgccctacaggcttc
actgggaacctttgccagatagacattgacgagtgtgccagcacgccatgcaaaaacggc
gccaagtgcacagatggacccaacaagtacacctgcgattgcactgaaggctacactggg
aagcactgtgagacggacatcaatgagtgttattctgacccgtgccactatggtacctgc
attgacggtctggcctcattcagctgccactgcaaccctggatacactggtcggctgtgt
gagaccaacatcaacgagtgtctgagccagccgtgcaggaacggaggcacctgccaggac
cgagagaacgcctacatctgcagctgccccaagggcaccacaggaatcaactgtgaaatc
aacattgacgactgcaagagcagtccctgtgactatgggacctgcattgacaagatcaat
ggctacgagtgtgcctgtgaacctggctacacaggtaccatgtgtaacatcaacatcgac
gagtgtgccatcaacccttgccacaatggcggcacctgtattgatggcatcaacagcttc
acctgcgtgtgtccagaaggttaccatgatgccacttgcttctcccaggtcaacgagtgc
ttcagcaatccctgcatccacggtcactgtgatgacaagatcaatggctataaatgcctg
tgtgattctggctggagtggtgaaaactgtgacatcaacaacaatgagtgtgaatccaac
ccatgtatgaatggaggaacctgcaaggacatgaccagcggatatgtttgcacctgtcta
atgggtttcaccggcccaaactgccagaccaacatcaatgaatgtgcctccaacccctgc
ctcaaccaagggacgtgcattgacgatgtcgcaggctacaagtgcaactgcatcctgcct
tacacgggagagaactgtgaaaccctgatggcgccctgcagcaccaaaccctgcaagcat
gaagggatgtgtcaggagtcggaggattatcagagcttctcctgtgtctgtcctgaagga
tggcaaggccaaacatgtgaggtggatatcaaagagtgtgtgaagaatccctgtcgcaat
ggagcaacctgccagaacacactgggcagttaccgctgtggttgcaaaccgggcttcact
ggacgccactgcgaaaccaacttggatgactgcaagcccaacccctgcagcaacggaggc
ctctgtaaggacgaggtgaatggcttcttgtgtacctgcctgcctggttttcggggcaca
aagtgcgaggaggacatcaatgagtgtgaaagcaacccatgtaagaacggagccaactgt
accgactgtgtcaacagctacacctgcacgtgcccacccggcttcagtggaatccattgt
gaaaataacacccctgactgcactgagagctcctgcttcaatggcggtagctgtgtggat
ggtatcaacacctttacatgtttatgcccgccgggcttcactgggagctactgccagcat
gacatcaacgagtgtgactccaaaccctgtctgaacggtggcacctgccaggacagctat
ggcacatacaagtgtacctgcccacatggatacactggactcaactgtcagaacttggtt
cgctggtgcgactcgtcaccctgtaagaacgggggaagttgctggcagaggggaaccact
tatagctgcgagtgtgagactggctggactggactttattgtgacgtcccaagtgtctcc
tgtgaggtggcagccaaacagagaggagtcgatgttgcccatctgtgtcgtaactcgggt
cagtgtctggacgcaggaaacgttcactactgccattgccaggttggatatactggaagt
tactgtgaggagcaggtggacgaatgcaccccaaacccctgccaaaatggagctacatgt
actgacttcttaggtggatacacctgcaagtgcatgccaggatacgtgggcaccaactgc
tctgacgagatcaatgaatgtttctcccagccatgccagaacgggggcacctgcattgac
ctgatcaatacctacaaatgctcctgtccccggggaacccaaggtgtgcactgtgagatc
aacatggacgactgcaacccgttcactgacccagtcaccaaagagcccaagtgtttcaac
aaagggaagtgtgtggatcgagttggaggctaccactgcatctgccctgcaggatacgta
ggggagcgctgcgagggagacgtcaatgagtgtctctccaacccgtgtgacccgcggggc
actcacagctgcatccagctcaccaacaactaccgctgcgagtgtcgcaccggatacaca
ggtcagcgctgtgacacagtgtttgatggttgtaagggaaaaccatgtcgcagtggaggg
acctgtgctgttgccagtaacactccacatggtttcatctgcaaatgtcctcctggcttt
actggctccacgtgtgaatatgacgcccaggcctgcggcagcctccactgccgcaatgga
ggcacctgcatctctggccataaaagtcccaagtgtctgtgcaccccgtccttcactgga
cctgagtgccagtatcccactgacagcccctgtaattccaacccctgctacaatggtggc
acatgtgaatacacctctgaggcaccgtactaccactgcgtctgccccacaaacttcaac
ggtctccgatgccacatcctagattataactttgatggagggttcggccatgacatccca
ccaccaacggaggtggaggtcacctgcaatatcccgcagtgtgaggaagctaagcacaac
aagttctgcgatgtgctctgtaacaaccacgcgtgtggctgggacaatggcgactgctcg
ctcaatttcaacgatccgtggaaaaactgctctgcctcgctgcagtgctggcgatacttc
aatgatggaaagtgcgattcacagtgtgacaacgctggatgtctctacgatgggtttgac
tgccagaatctggaaggacagtgcaatcctctgtatgaccagtactgcaaggaccactac
gctgacggccactgtgaccagggctgcaacaacgctgagtgcgagtgggacggcttggac
tgtgccaataacatgccagagaagctcgcagtgggccacttggtcttggtggtccacatc
aacccagaacagctcctcaacaactccttcggcttcctgcgcgagctgagccgcgtcctc
cgtaccaatgtgatattcagtaaagatgctaagggcgagatgatggtatatccgtactac
gggagcgaacatgagctgaagaagtacgtcaagcgctcagtggatacgtgggcagaggtt
cctggcaaggtactgaacgtggtgaagaggagcctggatgatgtagcaggtgggagcagg
agaatgaggagggagctggatcacttgcagatcaaaggttcagttgtccacttggaggtg
gacaaccgtcagtgcttccagcagtccacggagtgtttccagagcactgacgatgctgca
gctttcctcggggctttggcctccagtggaaaactggatgttccctacaccattgaagct
gtttatagcggtgtggaccaccagtatccaccggactacctaatttacttggtcctgggc
agcgtagggatactggccttcctcggagtggggatggtggctgcccgaaagcgccgccat
gagcacgggcgcctctggctccccgaaggcttcaagaccacagagaccagcaagaagaag
agacgtgagcctgtcggagaggattcggtgggattaaagccactgaaaaacatctcagac
atttcactcatggatgacgcccagaatgaatgggaagaagacgaaccgtcagatgccaaa
cgcttcaggcagtttgacgagcaggctgtactggaagtggatgaccaaacggaccatcgg
cagtggacacagcagcacctggatgctgctgacttgcgcatcccctccattgctcccact
ccccctcagggcgagattgaaaatgactgcatggatgtcaatgtccggggaccagatgga
ttcacaccgctgatgattgcatcctgcagtgggggaggtttagaaacaggcaacagcgag
gaagaagaggatgcatctgccaatgtgatcaacgactttatctaccagggcgctaacctt
cacaaccagactgaccgtacaggtgaaaccgctcttcacctggctgcccgctatgctcgt
tctgatgctgccaaacgcctgctggaggccagcgctgatgccaacatccaggacaacatg
ggcaggacgcctctgcatgctgctgtggcagctgatgcccagggggtgttccagattctg
ataaggaatcgcgccacagacttggatgcccgcatgcatgatggcactacacccctgatc
ttggctgccagactggcagtggagggcatggtggaggagctcataaactgtcatgctgac
gtcaatgcaattgatgattttggtaaatcagctctacactgggctgcagcagttaataac
gtggaggctgctattgtgcttctcaagaacagtgccaacaaggatatgcaaaacaacaag
gaggaaaccccactattcttggctgccagggaaggaagctacgagacagcaaaggtctta
ctggaccactttgccaacagagaaataactgaccacatggaccggctacccagagacatt
gcacaggaaagaatgcatcacgacattgtgcggctgatggacgagtacaacctggtacgg
agtcctcacatgcatggaggttcactcagcaccacgttgtcaccccctctctgctcaccc
aatggctacctgggcaacatgaagcagccccagcctcaaggtcaaggtcagggcaaaaag
gcacgcaagcccagtgccaagggcatcggctgcaaggatggcaaagacatgaaggtgaag
aagaagaattcgcaggatgggaagtctgggaacctcctggacagctcagccgttctgtcc
ccagttgactcgttggagtctccacacggctatgtttctgatgtggcctcaccgcccatg
atgacctcacctttccagcagtcgccatctgtatccctgaaccatctgcagggtatgtct
gacccacacctatctgtaaaccacatggtgatgccaaacaagcaggagctggctcgaatg
cagtttgacccactgccaccccgtcttacccatctgcccgtatctggttccagtggccag
gcccccataaacggccagtgtgattggctgtccaggatgcatggcagcctaaatcagccg
ggccagttcaaccccatgagaggagctcctggtggtcagggaagtctgcaccagggaggg
cagcacgggatgatgacctccctccacaatagccaccccaccactagcctgtctcagatg
atgaactaccaggggatccagagcaccagactaggtccacagccccacatcatgcagcag
caggctcagcagatgcagcagatgcagaacctgcagcagctccaacaacagcagcaacaa
caacaaagcatccagctgcagcaccagaactcaaacgcaaccagcagccagaacttcatc
ggcggggagctcacttccccagagcttcagcagggcacaagcaactccagcatgcccatc
cacacaatcctgccgcaggaaacccagattatgccctcctccatcaaccagtcaatgccc
agcacacagttcctcaccccaccttcccagcacagctattcaggccccatggacaacact
ccaaaccatcaggtccaagtgcctgaccatccctttctgaccccctcccccggctccccc
gatcactggtcaagttcttctcctcattccaacatgtccgactggtcagagggcatttca
agtccaccgacaagcatgcagtctcagattggacatatacctgaacagttcaaataa
DBGET
integrated database retrieval system
