Micropterus salmoides (largemouth bass): 119892221
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Entry
119892221 CDS
T07309
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119892221 (hnf1a)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119892221 (hnf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
Motif
Other DBs
NCBI-GeneID:
119892221
NCBI-ProteinID:
XP_038560305
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MEESAAKAKPSRLTALQEQLVWALLGSGLSQDVLVQAMGELERERASAGPEKVERGDGES
SEEGEMDFPPPIFRELEKLSSEEAAKLRVEVDQLLQGDPWHVAKMVKSYMQQHNLPQREV
VESTGLNQSHLSQHLNKGTPMKNQKRAALYTWYVKKQWEISQQFTNAKHGFASGEEQGED
TRKGRRNRFKWGPASLQILFHAYERQKNPSKEEREGLVEDCNRAECIQRGVSPSQLAGLG
SNLVTEVRVYNWFANRRKEEAFRHKLALDTPFPNQSASSSNHALPPSPEHVLWDLTSCFP
GVKYSHQILCDTVSSARGNGGERVGRLVVSPIQLEPSHTLLETHNHKQLSSSGPLPPVST
LTSLHSLSASTASSQSLIMASLPSVMSLGESSLLIGLASTPPQTVPVINNVGGAFTTLQP
ISFQQQLHASHQQPISQQLQSHMSASPFMATMAQLPCHMYNKSDSPQYHTSSLLSQAMVI
TDSSSLGTLTSLAAVRQILTAESDEPTDPPLEDSLHLQPHTPVAASSESLELYPASQPTD
SHQSHLLSPSPTDISSYIPTQMVSTAQ
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagtgcagccaaggcgaagccgagccgcttgaccgcacttcaggagcagctg
gtctgggccctgctgggatctggactgtcccaggacgtcctagtccaagccatgggtgag
ctggagcgagagagggcgagtgctggccccgagaaggtagagaggggggatggagagagc
tccgaggaaggagaaatggatttcccaccgcctatattccgagagctggaaaagctttca
tcagaagaggcggccaaactgagggttgaagttgaccagctactgcagggggatccctgg
cacgttgcaaaaatggtaaaaagctacatgcagcagcacaacctccctcagagagaggtt
gtggagtccacaggactcaaccagtcccacctctcccagcacctcaacaaaggcacaccc
atgaagaaccagaagagagccgctctgtacacctggtacgtcaagaagcaatgggagatc
agccagcaatttaccaacgccaaacatggctttgcatctggggaggagcaaggagaggac
accaggaaaggacggaggaacaggttcaaatggggtccagcgtcgctgcagatcctcttc
cacgcctatgaacgacagaaaaaccccagcaaagaggagagagaggggctggtggaggac
tgtaacagggcagagtgtatccagaggggggtgtctccctcccagcttgcaggcctgggc
tccaacctggttactgaggtccgggtgtacaactggttcgccaaccgccgcaaagaagag
gccttccgtcacaaactggctctggacacaccttttcccaaccaatccgcctcctcttct
aaccacgccctcccaccaagtcctgagcatgtgttgtgggacctgacatcttgttttcca
ggagtgaaatacagccaccaaatcctgtgtgacaccgtgagctcagccagaggtaacgga
ggggagagggtgggacgtcttgtagtcagccctatccaactggagcccagccacacactc
ctcgagacacataaccacaagcagctgtccagcagtggtccactgcccccagtaagcact
ctgacctcgctgcacagtctgtctgcctcgactgcttcctcacagagcctcatcatggcc
tcgctgcccagcgtcatgagcctgggggagtcctcacttctcatcggtttagcctccacg
ccgcctcagaccgtgcccgttatcaacaacgttggaggcgctttcaccactctccagcca
atctcattccagcagcagctccacgcctctcaccagcagccgatatcacagcagctccag
agccacatgagtgccagtcccttcatggcaaccatggcgcagctgccgtgtcacatgtac
aacaagtcggattcgccccagtaccatacgtccagtctgctgtctcaagccatggtgatc
actgacagcagcagcctggggacgctgaccagcctcgctgctgtccgacagattctaaca
gcagaatctgatgaaccgacggatccacctttagaagactctctacacctgcagccgcac
acacctgtggcagcttcttctgagagcctagagctgtatcccgcttctcagccgacagac
agccatcaatctcacctgctctcgccttcaccaacagacatcagctcctacattcctaca
caaatggtctctacagcgcagtag
DBGET
integrated database retrieval system
