Micropterus salmoides (largemouth bass): 119894774
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Entry
119894774 CDS
T07309
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04020
Calcium signaling pathway
msam04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119894774 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119894774 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119894774 (grin2ca)
Ion channels [BR:
msam04040
]
Ligand-gated channels
Glutamate (ionotropic)
119894774 (grin2ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
119894774
NCBI-ProteinID:
XP_038563370
LinkDB
All DBs
Position
Unknown
AA seq
1415 aa
AA seq
DB search
MGVRLGCLSDSPWWPPPLLLLLLLFCTVPCCSGRPFGIPMPSVNVAVVFSGSAYQAEIKG
RLSRENFMDLPLEVNPITVLVNNTNPRALLTRICDTLSTNRVHGVVFEDNVGSEAVAQIL
DFISTQTAVPIVGISGGSAVVLPYKGEGSNFLQLGASIEQQINGMFKVMEEYNWDSFVVI
TSLYPGYETYVDYIKSFTDTSYFIWDLQDVLTFDMSADGMNDIRARRLLQQVDAQVLLVY
CSHEEAQYLFAMASESGLLGPGYIWIIPSLAVGNPDIPPPDSFPVGLISIITDRWRMSLR
KRVRDGVAIVVKGVQSFQKQRGFVPEGQSDCHNPVKPSFTNDTLFRHMLNVTWEHNDFSF
NSNGYLVNPAMIIITLDRERQWDKVGTFEMGILQMRYPVWPRYGSYLEPVSDYRHLTVAT
LEERPFVIVEAVDPVTGTCVSNTVPCRRQSNKTEEIVGHTEPYTKLCCKGFCIDILKKLS
RTIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPF
VETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYCSPVGYNRSL
VTAKDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTAN
LAAFMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKY
NQKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKD
SRWKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAM
GLSLLVFAWEHLLYWKLRHSVRKSERLDFLLAISRGIYSCFNGVEETDHNGSMQSPDITT
NYTQANMLKMLQTAKDMVSSARVENSLDNATKTIENWSRRGPDNVRAGLPPRVTTTDMTH
GRLPYISSITDNHSPYPQRALTPTFPVHYGDNSTQPLLDKPRVVTRPTPLRYTLPNRSSQ
HVFERTLPISSLSSPHIAMRDPAPSGTSNPHHSSRLYVENQARHPTSPFVPYREFQVPDI
YVEHKGPLRRKFSYPPDCVTRRRRSHSYVLDAAEPRVRGDYDEPRSCLAELRANHLLNNH
APVAAAMACTSGHYPGGSTSCNSCMKSYLEPEMDDIPLLGKDKLNRRASFLKATWGNDRV
HQVDETKPSTSTSPSTRVDMPDLFPRVVVANPKPHKLYGSLGHNLSCYPLAAEPAYLDPA
HMGSYPYKQKLKYSESTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVYVG
PLAQGPSQFYGGSKDMCHLFPCTSHCPDNAAMLPRMSDRQVVYHNNMFGPYESTGKREDP
GPGNRERRQVLVARRVNSPYVPKPWGRVSSLESEV
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtctaggctgcttgagcgactccccgtggtggccgccgccgctgctgctg
ctcctgctgctgttctgcactgtcccctgctgttcaggaaggccatttgggattcccatg
ccttctgtgaatgtggcggtggtgttcagcggttcggcctaccaggcagagattaagggc
cggttaagccgggaaaacttcatggacctgcctcttgaagtgaaccccatcactgtgctg
gtcaacaacaccaacccacgggcactgctcactcgcatctgtgataccctctccaccaac
cgcgtccatggcgtggtgtttgaggacaacgttggctcggaggccgtggcacagatcttg
gacttcatttccactcagacagctgtgcccatcgtgggaatcagtggaggctctgctgtc
gtcctgccatacaagggtgaaggctccaacttcctccagcttggcgcctccattgagcag
cagatcaacggcatgttcaaggtgatggaggagtataactgggacagctttgtggtcata
accagcctttacccgggctacgaaacctacgtggattacattaagtccttcacagacacc
agctattttatatgggatctgcaggacgtgttgacgttcgatatgtccgcagacggcatg
aacgacatccgagcgaggagacttctgcagcaggtcgacgcccaggtgcttttggtctac
tgctctcatgaagaggctcagtacctgttcgccatggcatctgagtccggattgttgggg
ccaggctacatctggattattcccagcctggcagtggggaacccggacatccccccacct
gacagcttccctgtggggctcatcagcatcatcacagaccggtggaggatgagcctgagg
aagagggtgcgggacggggtggctatcgtagtgaaaggagtgcagagctttcagaaacag
agaggcttcgttcccgagggccaaagtgattgtcacaaccccgtcaagccatcctttact
aatgacactctgttcaggcacatgttgaatgtaacctgggaacacaatgacttctccttc
aacagtaacggttacctggtgaatccagccatgataattatcactttggacagagagaga
cagtgggacaaggtggggacctttgagatggggatcctgcaaatgagataccccgtgtgg
ccgcggtacggctcctacctggaaccggtgtcggattacagacatctcacggtggccacc
ctggaggagagaccctttgtcatcgtggaggcagtggaccctgtgactggtacatgtgtc
agcaacactgtaccctgccgacgacagtccaacaagacggaggaaattgtgggtcacact
gagccgtacacaaaactgtgctgcaagggcttctgcatagacatcctaaagaagctgtcc
cgcaccataaagttttcctatgacctctacctggtcaccaacggcaagcacggcaagctg
gtccgaggcatttggaacgggatgatcggagaggtgttctacaaacgggcggacatggcc
atcggctcgctgaccataaacgaagagcgttctgagattattgacttctcagtgccgttt
gtggagacagggatcagtgtgatggttgccagaagtaacgggactgtctcaccatctgcc
tttttagaaccatacagtccggcggtgtgggtgatgatgttcgtcatgtgtttgactgtt
gtggccatcacagttttcgtctttgaatattgcagtccagttgggtacaaccgcagcctg
gttactgccaaagatcccggaggtcccacgttcactattgggaagtcagtgtggctgctg
tggggaatcgtcttcaacaactcggtccccattgagaatccaaagggcaccaccagtaaa
atcatggtcctggtctgggctttcttcgctgtcatcttcctggcttcctacacagccaac
ctggcagccttcatgatccaggagcaatacatcgacactgtctctggactgagtgacaaa
aagtttcaaaagccacaggagcagtaccctccgttccgctttggtacggtcccaaatggc
agcacagagcgcaacataaggagtaactaccccgaaatgcactcccacatggtcaaatac
aaccagaagggagtagaggatgcccttaacagcctcaaaaccgggaaactggatgccttt
atctatgatgctgctgtgctgaattatatggctggcaaagatgagggctgcaagctggtg
accattggcagtgggaaagtgtttgccaccactggttatggcattgccctgcagaaggat
tcacgctggaaacgacccatcgacctggcccttctgcagttcctggctgatggcgacaca
cagaagctgcagaccgtttggctcacagggatctgccgtaatgagaagaaagaggtgatg
agcagtaagctggacattgacaacatggcaggggtcttctacatgctgcttgtggccatg
ggcctgagcctgctggttttcgcttgggagcatctgctctactggaaactacgacattca
gtccgcaaatcagagcgcctggacttcctcctagctatcagcagaggcatctacagctgc
ttcaatggagtagaggaaacggaccacaatggtagcatgcagagtccggacatcactacc
aactacacacaagccaatatgctaaagatgctgcagacagccaaggacatggtgtcctct
gccagagtggaaaactctctagacaatgccactaaaacaatagagaactggagcaggcgt
gggcctgacaatgtgcgggctggcctgccacccagagtgacgaccacagacatgacccat
ggccgtcttccctatatctccagcatcacagacaaccactcaccataccctcagagggcc
ctcacacccaccttcccagttcattatggggacaactccacccagcccctcctggacaag
ccccgggtggtgacccgacccaccccactccgctacacgctaccgaaccgcagcagtcag
catgtcttcgagaggactctcccaatctccagcctcagcagccctcatatcgccatgcgg
gaccctgctccctctggtacttctaatccccaccacagcagcaggctgtatgtggagaac
caggcacggcaccccacgtcgccttttgttccttacagagagttccaggtgcccgatatc
tatgtggagcacaaaggcccactgaggaggaagtttagctacccccctgactgtgtgacc
cggaggaggaggtcccatagttacgtgcttgatgctgcagagcctagagtgagaggtgac
tatgatgaacctcgatcctgcctggctgagttgagggccaatcaccttttgaacaaccat
gcacctgttgctgctgccatggcctgcacttcaggccactacccaggtggcagcaccagc
tgcaactcctgtatgaagtcctatctcgagcctgaaatggatgatataccacttctgggg
aaggacaaactcaaccgccgcgcctcattcctcaaagctacatggggcaacgatagggtc
catcaggtggatgaaacaaagccctccacatcaacctctccctccacccgtgtagacatg
cctgacctgtttccacgggtagtagtggccaacccaaagccccacaagctatacggcagc
ctggggcacaacctgtcctgctaccccttggccgctgagcctgcctacttggacccagcc
catatgggctcctacccctacaagcaaaagctcaagtactcggagtccactcgattgccc
tcttacagagaagccatcctgcagaatgccgctgccctgcgccgctcctcctccacagtg
gtgcacagacactactccacctatctgaactcatacacagacttaccagtgtatgttggg
ccactggcccagggaccgtcccagttttacggtggttccaaggacatgtgccacttgttt
ccctgtacaagccactgcccagataacgcagcaatgctgcctcgtatgagtgacaggcag
gtggtttaccacaacaatatgttcgggccctacgaaagcacgggaaagagggaagaccca
ggccccgggaacagagagaggaggcaggtgttggtggcgcgcagagtcaatagtccctat
gtgccaaagccctggggcagagtatccagcctggagtctgaggtctga
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integrated database retrieval system
