Micropterus salmoides (largemouth bass): 119902594
Help
Entry
119902594 CDS
T07309
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119902594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119902594
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119902594
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
119902594
NCBI-ProteinID:
XP_038574816
LinkDB
All DBs
Position
Unknown
AA seq
2530 aa
AA seq
DB search
MAAVLLQVLERTELNKLPKGVQNKLEKFVTELQNANEELRTQHERFKADSEQQYFDIEKR
LAESQDQILSATRDLQTLKEENKKLNEELSTLKGIEGETSEDKQPQQQTKAKYEIEAEKR
ELARLLEKRTQEVENLTEDVKRLNEKLTETSKVKMELQLKLDDIQSSESSVQHRENRMEQ
EKELHEKKIEWLTAELKTKTDELLNINREKGKEILELQGSLKNSKEQVTELERQLASLKE
TSESQSKRAEDLNNKLKQAKDEQSAMEEKYRNELNAHVKLSSLYKGSATATETKNQELSR
AVEELSKLVKDVGEANKTLEKKVSEGEELKTRLEAELREKIKKMEKELENATVKAAGRHC
CGPSLTEEQLDSMCPSAASIAAIVKPGMKFFDLYNAYAECQTQLQLEKQETRRVSRVLDE
IVQEVESKAPVLKRQREEYESMQRSMASLCNKLEQARTEIYSLQKEKDEAKQGCDAMERD
KLRTERQLEDTSAQLCALLVELEEARGNQVTKEDGSVANISSTSEVISPHPLSFRSVEEL
QRQNQTLLGRLRELEEEKDRHQSQVTSARVSELEASVDKLQKEVEQLREQRNQQKQLADS
SARQRDMFKALLTQSTGFSLPPQSSDSSSHPAQVKPSVPATRSTPQRAAAAESAQTAQAK
AALKQLNDAFTLYKKEKAENDRMSNETNDRLQKQLTELRSSHAKLTSQLEFSNKRYEMLQ
ETASAYRREISALQDRNQKMAAMAQRHEHIIHTMSQDLRQTNEKLALEEVRVENLTKERD
MLRQAESRLNREKEAVMAEQRNQNLLLTNLKTMQLTMERTETDTRQRLNNKIENLEAELA
SMKTRLDQEVAQRHTLGRTMDAQLLEAKKQLETQNTLQQKTRELLQSSEQQVAALKAQLA
SASSSEAVTSSSNTTTPATRASALRAPLRVRSPVPASSQQPSQSEQELAEVKGLLRTAEE
QNSELAEQLKNANATVEQYRAVVLTLEDSLKKEKESRSPLEIRLKESEEVQKQLENRILE
VEKMKQQVEEERRQAVDAVEKQVCELQRSLKASQAEQQEALERAAAAVTQEQKAIQDSLL
QTKLAGEAQAKYERELMLHAADVEALQELKKRTQQEAAQKRDFEERLNKTTSLLQEKTAG
WATMERQLKEDLSNKSRRCAELGKQNSLLHQQMDEMATRSRELQQQQQKQLQVDLPFSGE
GKTTEQILEILRFVRSEKEIAVARSEVSEEEALRHKQRVEHQDRELKELQEALNAEREKL
LAASKTLAQQEEQLKKLETLGALQETNRIMKMDRDKLEQELQQAQVKVTKLQSDISPLHH
SLSQLSEKNGSLQADKRILEEDLKRWKAKAQQLVSQQKDGDVEERQKLTTEREALQRRMT
QQTEETAKLKTELARSNASSNSAQSQLQALRDSVARLASERDTLKKDLEAKTSDILEKNK
TITQVKKIGRRYKTQYEELKVQHDKLVAETAAKAGSEAAPSQEVQQELTKAQEELNKARE
ELITLKAEVQNKQEAAQKSQQELEEAQKENQQTKEKFQEVQNQLTQTQNQLKQVQSQLSQ
TQTQVQQNQNQLTQSQKELQQAKTHTQQVQNQLKSAQSLAQGRQNQIQQIQRELQQAKES
LQQNLANQKELQQNQQNSQQSHNQEVGNLKTALSQAESKVTELQGQLDSLQKTVGERDAD
IKRLQEQLTEANQANETSRATQANQNQSSQSIQASDANVASDANKALQEELAKLRQEQSE
SKCREDQLRQQMAEKEEKTKKVFMGAKTKINQLNSAKEQLSQEIEELKQSKEELEVRMNA
LKSQYEGRLLRLDRELRELKETQAHSDPREEPQDQSGAKVGDQARSADQRQISLKSPAQD
RGSSSLSDPPTANIRPTPSTPSPSNKPSPSTGSKATPRASIRPMVTPAAVPIPTPTATVM
PTTQTDSQEVLSSVHSTSSSLANTPTSITQPTSTQATAFVQPTQQQAANQDTGPSVDAER
PTTSSSLVGTAGSKRGREDEEEESRPESSHTPPSTKKLRLKPTMQLQIEGDEEIEEELGD
EGERQDSPDDSQELPEECFPVLAEDDEDLEEGGVSQSVPSEQMSSQGSTIIRDVIVIDTD
SESRESKEAEEKQEDEGEEEEEEEEEEEEEEEYKEEEEDDEEDDDGGDSGMREGEESNEE
SRGAEEEGGEEEPPEAPNAEENVCGASSDSQHASEPSHSSEGSSGATSESDPPRDLVQLP
PTSTTSGPSPSSLTPRLPHPRRPPHPLPPRLYIQPPAHELGPPHTQRQPSQLRRPSVGRG
PQLTPGIGSMQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGLSTRFRFGPPEDL
LSQTSGSHSDLGQLASQGDVCIGLGMYESPLFLAAHDEDGGGRSVPTTPLQVAAPVTVFT
ESLPSDSGDNMASQSVPMVTASAGMASAGDDGDEVFMEHEGEGPESSLDSQTDMESTGQQ
SEDATLPSTSQDPDTSSVPQRRTLTSQPLMSILSGRGNRGGRGEARTLLSRRGTFSRGGR
GGAMGRGGFA
NT seq
7593 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcctgctgcaggttctggaaaggacggagttgaacaaactcccgaaaggc
gtccagaacaagctcgagaagtttgtaacggagctgcagaatgctaacgaggagctcagg
acgcagcacgagcggttcaaagcagacagcgaacagcaatactttgatatcgagaagaga
cttgcagagagtcaggaccagatcctgtctgctaccagagacctgcagacacttaaggag
gaaaataaaaaactcaacgaagagctgagcactttgaagggaatagagggagagacctct
gaagacaaacaaccacaacagcaaaccaaggccaagtatgagattgaggcagagaaaaga
gagttggcgaggctgttggagaaaagaacgcaggaggtggaaaaccttactgaggatgtg
aagcgtctgaatgagaagctgacagaaaccagcaaagtcaagatggaactgcagttaaaa
ctggatgatatacagtcgtctgagtcttctgtacagcaccgggagaatcgcatggagcag
gagaaggagttacacgagaagaaaatcgagtggttaacagcagaactgaagaccaaaact
gatgaactgttgaacatcaacagagagaaaggcaaagagatcctggagctacagggtagt
ctgaagaacagcaaggagcaggtgactgaactggaacgtcagctcgcttctctgaaggaa
accagtgaaagccaaagtaagagagctgaagacctcaacaacaaactgaaacaggctaaa
gacgagcagagtgccatggaggagaaataccgcaatgagctcaacgctcatgtcaagttg
tcttcgctctacaagggttctgcaacagccacagagaccaagaaccaagaactgagcaga
gctgtggaagagctcagcaagctggttaaagacgtcggggaagctaataagactctagag
aagaaggtgtcggagggagaagaactaaagacgcgtcttgaagcagagcttcgagaaaag
atcaagaaaatggagaaagagctggaaaacgccacagtgaaggctgcaggcagacactgc
tgtgggccctcgctgactgaggagcagctggactccatgtgtccatcagcagcttccatc
gccgcaattgtcaagcctggcatgaagttttttgatctgtataatgcgtatgcagagtgt
cagacgcagcttcagcttgagaagcaggagaccaggagagtgagccgagttctggatgag
attgtccaggaggttgagtccaaggctcctgtcctcaagcggcagagagaggagtacgag
agtatgcagagatccatggcgtccttgtgcaacaagctggaacaggctagaacggagatt
tacagtttacaaaaagagaaagacgaggccaagcagggctgtgatgccatggagagagac
aaactgaggacagagagacagctggaggatacttcagcacagctgtgcgctcttctggtg
gagctggaggaagccagaggtaatcaggtgaccaaggaagacggcagcgtcgccaacatc
tccagcacctccgaggtcatcagtccacaccctctgtccttccgcagcgtggaggagctg
cagaggcagaaccaaaccctgctgggaaggctgagggagctggaggaggaaaaggacaga
catcagagccaagtcacatcggcgcgtgtgtcagagttggaggccagtgtggataagctt
cagaaggaggtggagcagctgagagagcagaggaaccagcagaaacagctggctgactcc
agcgccaggcagagagacatgttcaaggccctgctgacacagagcaccggcttcagcctg
cctccgcaaagttcagattcttcatcccaccctgcacaagtcaagccttcagtcccagct
actcgctcaacccctcagagagccgctgctgcagagtcggcacagactgctcaggctaaa
gctgctttaaaacagctgaacgatgcctttactctgtacaagaaggagaaggcagagaac
gacaggatgtcgaatgaaacaaacgacaggctgcagaagcagctgacagagctccgctcc
agccacgcaaagctgacctctcagctagagttcagcaacaagaggtatgagatgctccag
gagactgcatccgcctaccgcagagagatctctgccctacaggacaggaaccaaaaaatg
gctgcaatggcccaacgacacgagcacatcatccacaccatgagccaagacctccgacag
actaatgaaaaactggcactggaagaggtgcgcgtagagaatctaactaaagagagagac
atgctgagacaagcagagagtcgactcaatcgagagaaggaagctgtgatggccgagcaa
cgtaaccagaacctgctgctcaccaacctcaagactatgcagctgacaatggagcgtaca
gagacagacactcgccagcgactgaacaacaagatagagaacctggaggcagaactggct
tcaatgaagaccagactggaccaggaagtagcgcagagacacaccctcgggcgcactatg
gacgctcagttattagaagctaagaaacagctggagacccagaacaccttgcagcagaag
acaagggagttgttacaaagctctgaacagcaggtggcagcactgaaagcccagctggct
tctgcttcatcctctgaggctgttactagctccagcaacacaaccacccccgctaccaga
gcttcagccctcagagcaccacttagagtacgctctccagtgccagcatcctcccagcag
cccagccaatcagagcaggagcttgcagaggtgaaaggtctgctgcgtactgctgaggaa
caaaacagtgaactagcagagcagctaaagaatgctaatgctactgtggagcagtacagg
gctgtggtactgactctggaagacagtctgaagaaagaaaaggagtctcgctcccctctg
gagatccggctcaaggagtctgaggaagtgcagaagcagctggagaacaggattttagag
gtggagaaaatgaagcagcaggtggaagaagagaggagacaggctgtggatgcagtggaa
aaacaagtgtgtgagctgcagcgcagtctgaaggccagccaggcagagcaacaggaggcg
ctggagagagctgctgctgctgttacacaggagcagaaggccatacaggacagcctgctg
cagactaaactagctggagaggcgcaggctaagtatgagcgggagctgatgcttcatgct
gctgatgtggaggccctgcaggagttgaagaaaagaactcagcaagaagcggcacagaag
agggatttcgaggagcgactgaacaagaccacctccctcctgcaggagaaaactgcaggc
tgggccactatggagagacagctgaaggaggatctgtccaataagagtcgtcgctgtgcg
gagctggggaagcagaattcactgctgcaccaacagatggatgaaatggccacacggagt
cgggagctgcaacaacaacaacagaaacagctgcaggttgacctgccattcagcggggaa
gggaagaccactgaacagatactagaaatactcaggtttgtgcggagtgagaaagagatc
gctgtggctcgaagcgaggtgtctgaggaagaagctcttcgccacaaacagcgagtggaa
caccaagacagagaattgaaggagctacaggaagctctaaacgctgagagggagaaactg
ctggctgcatcgaagactctggctcagcaggaggaacagctgaagaagttggagactctc
ggtgctctccaagaaaccaacaggataatgaaaatggacagagataaactggaacaagag
ctgcagcaagctcaggttaaagttacaaagctccagtcggacatcagcccactacatcac
tctttgtctcagctgtcagagaaaaatggctccttgcaggccgacaagaggatactggag
gaagacctcaaacgctggaaggccaaagcacagcaactggttagccaacagaaagacggc
gatgttgaggagagacagaaactcaccaccgagagagaagctctgcagagacgcatgaca
cagcaaactgaagagaccgccaagctgaagactgaactagcaagatccaatgccagcagt
aactctgctcagtctcagctgcaagccctcagagactctgtggcccgtctggcgtcagag
agagacactctgaagaaagacctggaagctaaaaccagcgacattctggaaaagaacaag
accatcacccaggtcaagaagattggacgacgctacaagacccagtatgaggagctgaaa
gtccagcatgacaagctggttgcagaaacagctgctaaagcaggaagtgaggcggctccg
agccaggaggttcagcaggagctgactaaagcccaggaggagctcaacaaggcccgagag
gaactgattacactgaaggcggaggtgcagaataaacaggaggcggcccagaagtcccag
caggagctggaggaggcccagaaggaaaaccagcagaccaaggaaaagttccaggaggtc
caaaaccagctgacacagacccagaaccagttaaaacaggtccagtcccagttgtctcag
acccagactcaagtgcagcagaatcaaaaccagctgactcagagtcagaaagagcttcag
caagccaagacccacacccagcaggtgcagaaccaattgaaatcagctcagtctctggct
cagggccgtcaaaaccagattcagcagatccagagggagctccagcaggctaaagaatcc
cttcagcagaacctcgctaatcagaaagagctacagcagaaccagcaaaacagtcaacag
agccacaaccaggaagtcggcaacctcaagaccgctctcagccaagcagagagcaaggtg
actgagcttcaaggccagctggacagcctgcagaagacggttggtgagcgtgacgcagac
atcaagcgtctgcaggagcagctaactgaagctaaccaggctaatgaaactagccgagcc
acacaggccaaccagaaccagagttcccagtccatccaggccagtgatgctaatgttgct
agtgatgctaacaaggcactacaagaggagctggcgaaactcagacaagagcaatctgag
agcaagtgcagagaggatcagctcagacagcagatggctgaaaaagaggaaaagacgaag
aaagtcttcatgggagcaaagaccaaaatcaaccaactaaacagtgccaaggagcagctc
agtcaggagatagaagaactgaaacagagtaaggaggaactggaggtgagaatgaacgcc
ctcaaatctcagtatgaaggacgacttcttcggctggacagagagctgagagaactaaaa
gagactcaagcacactctgaccccagagaggaaccacaggaccagagtggagctaaggtg
ggtgatcaggccagatctgcagaccagagacagatatctctgaagagtcctgcccaagac
aggggaagctccagcctgtctgaccctcccactgccaacattcgccccaccccaagtact
ccatctccaagcaataagccgagcccctctactggtagcaaggccacaccccgtgccagc
atccggcctatggttacgccggcagctgtccccatcccgacgcccaccgccacggtcatg
ccgaccacacagactgatagccaagaggtgctgagctctgtacactctaccagctccagt
ctggcgaacacacccacatcaataactcagccaaccagcacccaggccacagcttttgtc
cagcccactcagcagcaggcagccaatcaagatacaggccccagtgtggatgcagagcga
ccaactacttcttcctctctggttggaacagcaggttcaaagcgaggcagagaggacgag
gaggaggagagcagaccggagagttcacacacacctccgtccactaaaaaactacgacta
aaaccaacgatgcaactgcagattgaaggtgatgaggagattgaagaagagctgggggat
gagggcgaacgacaggattcaccagatgacagtcaggagcttccagaggagtgtttccct
gtcttagctgaagacgacgaggatcttgaggaaggaggcgtgtcccagtctgtcccctct
gaacagatgtcctctcagggctccactattattcgggacgtcatcgtgatcgacacggac
agcgagagccgtgagagcaaagaggcggaggagaagcaggaggatgaaggcgaggaggag
gaggaggaagaagaagaagaagaggaggaggaggagtataaagaggaagaagaggatgat
gaagaggatgacgatggcggtgacagcggcatgagggaaggcgaggagagtaatgaggag
agcaggggagcagaagaggagggaggggaggaggagccaccagaagcccccaacgcagag
gagaacgtgtgtggagcgtcttcggactcccagcatgcctctgagccgtcgcacagcagt
gagggcagcagtggtgccacgtcagagtccgacccccccagagaccttgtacaactcccc
ccaacctccaccacctctgggccctccccctcgtccctgacaccccgcctgccccacccg
cgtaggcccccacaccctctcccaccacggctctacatccaacctccggctcacgagctg
ggacccccgcacacacagcgacagccctctcagctgcgcagaccatctgtagggcgcgga
cctcaacttactcctggaataggcagtatgcaacatttctttgacgatgacgacagaatg
gttcccagtactcccactctggtagtcccacaccgcactgatggctttgctgaggctata
cattctcctcaggtagcgggtctgtccaccaggttcaggtttggacctccagaggacctg
ctgagtcagacatcaggctcacactctgacctgggacagctggcctctcaaggagatgtg
tgtataggtctggggatgtacgagtctcctctgttcctggccgcgcatgatgaggacgga
ggaggaaggagcgtgcccaccacgcctttacaggtggctgcaccagtgaccgtcttcacg
gagtctctgccgtcagacagcggcgacaacatggcatcccagtcggttcccatggtaacc
gcctccgccgggatggcttctgccggcgatgatggagatgaagtcttcatggagcacgaa
ggagaaggtcctgaatcttctttggacagccaaacagacatggagtctaccggacagcag
agtgaggatgcaacactgccatctaccagccaagaccctgacaccagcagtgttcctcag
cggcgcacactgaccagtcaacctctgatgagcatcctgtcgggcagaggaaacagagga
gggaggggcgaggccaggacgttactcagccgcaggggaactttctctcgaggaggaagg
ggaggagccatgggcagagggggctttgcctaa
DBGET
integrated database retrieval system
