Micropterus salmoides (largemouth bass): 119910275
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Entry
119910275 CDS
T07309
Symbol
odc1
Name
(RefSeq) ornithine decarboxylase isoform X1
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam00330
Arginine and proline metabolism
msam00480
Glutathione metabolism
msam01100
Metabolic pathways
msam04148
Efferocytosis
Module
msam_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
119910275 (odc1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
119910275 (odc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119910275 (odc1)
Enzymes [BR:
msam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
119910275 (odc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
119910275
NCBI-ProteinID:
XP_038584709
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MNTATPTEFEFSFLEEGFSARDIVEQKINDSSMTDDRDAFYVCDLGDVLKKQLRWMRALP
RVTPFYAVKCNDSRAVVMTLASLGTGFDCASKTEIQLVQSLGVDPSRIIYANPCKQVSQI
KYASAHGVQMMTFDSEVELMKVARCHDNAKLVLRIATDDSKAVCRLSVKFGAPLKACRGL
LEQAKKLGLDVIGVSFHVGSGCTDPETYTQAIADARCVFDIGDELGFNMDLLDIGGGFPG
SDDAELKFEEITAVINPALDKYFPADTGIKIISEPGRFYVASAYTLVVNIIAKKVIMDDE
PGSDEEDDVTNDRTLMYYVNDGVYGSFNCILYDHAHCLPTLHKKPKPDEVRYPCSIWGPT
CDGLDRIVEQCNLPDLQVGDWLVFENMGAYTVAASSTFNGFQRPDIHYVMSRRAWHQVQQ
ICSQGMPAPAEESCLFEVPACCGRESSLEMPTKPCQAHVV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgccactcctactgagtttgaattctctttcctggaggagggtttctctgcc
agggatattgttgagcagaaaattaatgactcatccatgacggatgacagggatgctttt
tatgtctgtgacttgggagatgtgctaaagaaacaactgcgctggatgagggctctgcct
cgcgtcactcctttctatgccgtcaaatgcaacgacagccgggctgtagttatgacactg
gcatccctgggaactggctttgactgtgcaagcaagacggagattcagctggttcagtct
ctgggagtggatccaagcagaatcatctatgccaacccctgcaagcaagtttctcagatc
aagtatgcatctgcccatggggtccagatgatgacctttgatagcgaggtggaactcatg
aaagtagcccgctgtcatgacaatgccaagctggtgttgcgtattgccacagatgactca
aaggcagtgtgtcgcctaagtgtgaagtttggggccccactcaaagcttgtcgaggtctt
ctggagcaggctaaaaaactggggctggatgtgatcggtgtcagcttccatgttggcagt
ggctgcactgatcccgagacctacacccaggctatcgctgatgcccgctgtgtcttcgat
attggggatgagctgggcttcaacatggacctgttggacattggaggtggtttccctggt
tcagacgatgcagaactcaaatttgaagagatcacagcagtaatcaaccctgccctggac
aagtattttcctgctgacactggtattaagattatttctgagccagggcgcttttatgtg
gcctctgcttacacactggttgtcaacatcattgccaaaaaggtcatcatggacgacgag
ccaggctctgacgaagaagacgatgtgaccaatgataggactctgatgtactatgtcaat
gatggagtgtacggctccttcaactgtatactctatgaccatgctcactgtttgccaaca
ctacataagaagccaaagccagatgaggtcaggtacccctgcagtatctggggcccaacg
tgtgatggccttgatcgcattgttgagcagtgtaacctgcctgacctgcaagtgggtgac
tggctggtctttgagaacatgggtgcttacaccgtggctgcctcctccaccttcaacggc
ttccaaagacctgacattcactatgtcatgtcccgccgtgcctggcatcaagtgcagcag
atctgttcccagggcatgccagctcctgcggaggagtcttgcctgtttgaagtgccagcc
tgctgcggcagagagagcagcttggagatgcccacaaaaccctgccaggcccacgtggtt
taa
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