Micropterus salmoides (largemouth bass): 119914644
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Entry
119914644 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 1-like
KO
K02599
Notch 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119914644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_4
Ank_5
Ank_3
EGF_3
JAG1-like_EGF2
cEGF
Motif
Other DBs
NCBI-GeneID:
119914644
NCBI-ProteinID:
XP_038590006
LinkDB
All DBs
Position
Unknown
AA seq
2471 aa
AA seq
DB search
MYRFFVKLTFLIPAIVISQGLKCSLPTESCLNGGRCEATSNGNGECKCPSDYVGNRCQYP
SPCSPSPCRNGGECRAVSHGNTFDFRCVCRLGFTDRLCLTPTNHACMSSPCRNGGTCDLI
TLSIYRCRCPPGWSGKTCQLANPCASNPCANGGQCSAFDSTYICTCPPAFHGQTCKQDVN
ECAQTPSPCLNGGVCVNEVGSYNCRCPQEYTGQHCETPYMPCSPSPCQNGGTCVQKGDTT
YDCSCLPGFTGPHCEHNIDDCPGHNCQNGGVCVDGVNTYNCQCPPHYTGQYCTENVDECE
LMPNACQNGGTCHDTHGSYHCVCVNGWTGDDCSENIDDCASAACYHGATCHDRVASFFCE
CPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPPGYTGSACNLDIDECSLGA
NPCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECMSNPCNNDATCLDQIGGFHCICMP
GYEGVFCHINIDECASQPCLNNGKCIDKINSYHCECPKGFSGNLCQVDIDECASTPCKNG
AKCTDGPNKYTCECAEGYTGQHCETDINECYSDPCHYGTCKDGLASFTCYCRPGYTGRLC
ETNINECLSQPCKNGGTCQDRENTYICACPKGTAGFNCEVNLDDCKNKPCDYGRCIDKIN
GYECACEPGYTGAMCNINIDECAINPCHNGGTCVDGINSFTCLCPEGYNDATCLSQVDEC
GSNPCIHGRCQDLVNGYKCTCDSGWSGPNCDINNNECESNPCMNGGTCKDMTSGYHCTCR
VGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGENCETLLAPCSPRPCKN
GGVCKEAEDYQSFSCICPEGWQGQTCEIDINECVKSPCRNGAVCHNTRGGYQCKCQPGYT
GQKCETDTDECKPNPCSNGGLCRDGVNTFTCTCLPGFRGGRCEQDINECESNPCRNGANC
TDCVNSYTCTCPPGFSGINCEINTNDCTDSSCFNGGTCVDGINAFTCLCLPGFTGSYCQY
DINECDSKPCLNGGTCLDSYGMYKCTCPHGYTGVSCQNLVRWCDSSPCKNGGSCWQQGAS
YTCQCQTGWTGLYCDIPSVSCEVAAKQQGVEVAHLCRNSGQCLDAGNTHYCRCQAGYTGS
YCQEQVDECSPNPCQNGAACTDYLGGYSCECVPGYHGVNCSKEINECQSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINLDDCTPSTDPLTNEPKCFNNGKCVDRIGGYQCMCPPGYV
GERCEGDVNECLSDPCDPRGSYNCIQLTNSYRCECRTGYTGQRCDKVFDGCKGKPCRNGG
TCAVASNTPHGFICKCPPXGFTGSSCEYDSRSCGSLNCRNGGTCVSGHLGPRCLCPPTFT
GPECQTPTDSLCISNPCYNGGTCQITPDVPFFQCSCPSNFNGLLCHILDYSFVGGFGRDI
TPPPEVEVSCEIPQCDEWAGNHICDSLCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRY
FNDGKCDGQCNSPGCLYDGFDCQGQEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGL
DCANNMPEKLADGHLVLVVHICPEQLKNRSSAFLRDLSSLLHTNVVFRRDAKGEPMIFPY
YGNEQDLVKHNVLKRSADGWPEWASMPSNVLGQMKESVTGMVSSRKRRELDPVQVKGSVV
YLEIDNRQCYQQSSECFQSATDVAAFLGALASSGNLNVPYIEAVTSVRPTPSTSELYPMY
VVFMGLAALGFICLGVLVSRKRRREHGQLWFPEGFKVSEPSKKKRREPLGEDSVGLKPMK
ISDINLMDDNQNEWDDEDPDCRRFRFEEQAMLDLSDHTDHRKWTQQHLDAADLRIPSIAP
TPPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDPSAEIISDFIYQGAN
LHNQTDRTGETALHLAARYARSDAAKRLLESSADANVQDNMGRTPLHAAVAADAQGVFQI
LIRNRATDLDARMQDGTTPLILAARLAVEGMVEELINCHADANATDDSGKSALHWAAAVN
NVEAAVVLLKNGANKDMQDNKEETPLFLAAREGSFETAKVLLEQFANREITDHLDQLPRD
IAQERMHHDIVRLLDEYNVVRSPGLHSVPLSTSSLSPPLCSPNDYLSNLKPTMSVKKVRK
PSSGGKGGKDGGKDNRVKKKKSVDGKGNLLDTSAVLSPVDSLESPHGYLSDVASPPMTSP
FQQSPPMSLNHLQGNGDSHMGQMSMGKDMGCMSFDHNPPRLSHLPVSSPSSQGTASIGGW
VSRMHPGVGQQGSFTQAPPISHNMMGALHGVSTATLSHIMGYQNMQTSHLSSAHMMQQAH
SRQLQHQNSNSTTAGQSLNQSFPNVELNGSDMQQNNGRSMSIHTVMPQETQILGTQFLTP
PSQHSYSGPMDNTPNHQLQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGISSPPTSIH
SQMNLIPDQFK
NT seq
7416 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtttctttgtgaaactaacatttctgattcctgcaatcgtcatctcacaaggt
ctaaaatgctccctacccactgaatcatgcctaaatggaggaagatgtgaagccacctcc
aatggaaatggagaatgcaagtgtcccagtgactacgtgggcaatcgatgccaatatcca
agtccctgcagcccttcaccctgccgcaacggtggcgagtgccgcgctgtttcccatggc
aacacgtttgatttccgctgcgtgtgccgcctgggtttcacagaccggctatgcctgacc
cccaccaaccatgcctgcatgagctcaccctgtcgcaatggaggaacatgtgatctcatt
accctcagtatctaccgctgtcgctgcccgcctgggtggtcaggcaaaacctgccagctc
gccaacccatgtgcttccaatccatgtgcaaatgggggccagtgctcagcgtttgattcc
acctacatctgcacctgcccacccgccttccacggtcaaacctgcaaacaagatgtcaac
gagtgtgcccagacgccctctccctgtctcaatggtggtgtgtgtgtgaatgaggtgggc
tcatacaactgccgctgtcctcaagagtacactggccaacactgtgagaccccctacatg
ccatgcagtccctcaccatgccagaatggaggcacctgtgtgcagaagggagacaccacc
tatgattgtagctgcctgccaggcttcacaggtccgcactgtgagcataacatcgatgac
tgtccaggccacaactgccagaatggtggtgtgtgtgtggatggtgtaaacacctacaat
tgccagtgcccacctcattacacaggtcagtactgcacagaaaatgtggatgagtgtgag
ttgatgcccaatgcatgccagaatggagggacgtgccatgacactcacggcagctatcac
tgcgtctgtgtcaacgggtggacgggtgatgactgcagcgagaacattgacgactgtgcc
agtgcagcttgttaccacggtgctacctgccacgaccgcgtagcctccttcttctgcgag
tgtcctcatgggcgcacaggtttgctgtgccatctcgatgatgcctgcatcagcaatcca
tgtcaaaagggttccaactgtgacaccaacccagtcaatggcaaggcaatttgcacctgt
cccccaggttatactgggtcagcctgcaacctagacattgacgagtgctccctcggtgcc
aacccttgtgaacacggtggtcgctgcctcaacaccaaaggctctttccagtgcaagtgt
cttcaaggatatgagggaccccgctgtgaaatggacgtcaatgaatgcatgtctaatcct
tgcaataatgatgccacctgcctggaccagattggagggttccactgcatctgtatgcca
ggatatgaaggtgtgttctgccacatcaacatagatgagtgtgccagccagccttgtctg
aacaacggcaaatgcatcgacaagatcaactcgtatcactgcgagtgccccaaaggtttt
tcggggaatttgtgtcaggtggacattgacgagtgtgccagcaccccctgcaagaatgga
gctaagtgtacagatggtccaaacaagtatacctgtgaatgtgctgaaggttacacaggg
cagcactgtgagaccgacatcaacgagtgctactctgacccctgccactatggcacctgt
aaggatggcctagcctccttcacctgctactgccgacctggctacacaggccgcctgtgt
gagaccaacatcaatgagtgtctaagccagccctgcaagaatggtggcacttgtcaggac
agggagaacacatatatttgtgcctgccccaaaggcactgcaggtttcaattgtgaggta
aacctggatgactgtaagaacaaaccctgcgactacgggaggtgtatcgacaaaattaac
ggctacgagtgtgcatgtgagcccggctacacaggagcaatgtgtaacatcaacattgat
gagtgtgccatcaacccctgtcacaacggaggcacatgcgttgatggcatcaacagcttc
acctgcctgtgcccagaaggttacaatgacgccacctgtttgtctcaggtggatgagtgt
ggcagcaacccctgcatccacggccgatgccaggaccttgtcaatggctacaaatgtacc
tgtgactctggctggagtggcccaaactgtgacatcaataacaatgagtgtgagtccaac
ccgtgcatgaacgggggaacctgcaaggacatgaccagcggataccactgcacatgcaga
gtcggattcactggacctaactgccaaactaacatcaacgagtgtgcctccaacccctgc
ctgaaccagggcacctgcatcgacgatgtggctggatacaagtgcaactgtttgctgccc
tacactggtgaaaactgtgagaccctgctggcgccctgcagccccagaccctgtaaaaac
ggaggagtatgtaaagaggctgaagactaccagagcttctcctgcatctgccctgaagga
tggcaaggtcaaacatgtgagattgatatcaacgaatgtgtgaagagcccatgccgcaat
ggtgcagtttgccataacactaggggtggctaccagtgcaagtgccagccaggatacact
ggccagaaatgtgagacagacactgatgaatgcaaaccaaatccctgcagtaacggtggt
ctgtgccgcgatggcgtcaacactttcacgtgtacttgtctgccagggtttcgtggcggc
cgatgtgagcaggacataaatgagtgtgagagtaacccctgtaggaatggtgccaactgc
accgattgcgtcaacagttacacctgcacctgcccacctggcttcagcggcatcaactgt
gagatcaacactaacgactgcactgacagctcttgctttaacggcggcacctgtgtggat
ggaattaatgcattcacctgtctgtgtctacctggattcactggcagctactgccaatat
gatatcaatgagtgtgactccaaaccgtgcctcaatggaggcacttgtcttgacagttat
gggatgtacaaatgcacctgtcctcatggctacacaggagtcagttgtcagaatcttgtg
cgctggtgtgattcctccccctgtaaaaatggaggttcttgctggcaacagggagcctct
tacacctgccagtgtcagactgggtggactggtctctattgtgacatccccagtgtgtct
tgtgaggttgcagccaaacagcaaggagtggaggtagctcacctgtgcaggaactccggc
cagtgtctggatgctggaaacacacattactgccgctgccaggccgggtacactgggagt
tactgccaggaacaagtggacgagtgctcacccaatccatgccagaatggagccgcctgt
actgattatctgggaggctacagttgtgagtgcgtccctggctaccacggtgtaaactgt
tccaaagagatcaatgaatgtcagtcacagccctgtcagaatggaggcacctgtatcgac
ctcatcaacacatacaaatgctcctgtcccagaggaacacaaggtgtccactgtgagatt
aatttggatgactgcaccccctccaccgacccactgaccaatgagcccaagtgcttcaac
aatggcaaatgtgtggaccgcattggaggataccaatgtatgtgcccaccaggctacgta
ggtgagcgctgtgaaggtgatgtcaacgagtgtttgtcagacccctgtgaccccagaggg
tcctacaactgcatccagctaaccaacagctaccgctgcgaatgccgcactggatataca
ggtcagcgttgtgacaaggtgtttgatggctgtaaaggaaaaccctgcaggaatggagga
acatgtgctgttgccagtaacacaccccatggtttcatctgcaaatgtccaccgtgaggc
ttcaccggctcttcttgcgagtatgattctcgctcctgtgggagtctgaattgcaggaac
ggaggtacatgtgtgtcaggccacctagggccacgctgcctgtgtccaccaaccttcaca
gggcctgagtgccagacccccactgacagcctctgcatctccaacccctgctacaatggt
ggcacttgccagatcactccagacgtacctttcttccagtgcagctgccccagcaatttc
aatggcctgctgtgccacatcctggactattcctttgtcggaggttttggccgggacatc
accccacctccggaagtggaggtgagctgcgagattcctcagtgtgacgagtgggcaggg
aaccatatctgtgactccctgtgcaacaaccatgcctgtggctgggatggaggagactgc
tcacttaattttgatgatccttggcaaaactgctctgcggccttgcagtgctggcgctac
tttaatgacgggaagtgcgatggccagtgcaacagccctggctgtctctatgatggcttt
gattgtcagggacaggaaggacaatgcaacccactgtatgaccagtactgtaaggaccac
tatgctgatggccactgtgatcagggctgcaacaatgcagaatgcgaatgggacggcctg
gactgtgccaacaacatgccagagaagctggcagatgggcacttagttctggtggtccat
atttgccctgaacagcttaaaaaccgttcttcagccttcctcagagacctcagcagcctt
ctccataccaacgtagtgttccgccgtgacgccaaaggagaaccaatgatcttcccttac
tatggcaatgaacaggaccttgttaaacataacgtgctgaagcgctccgcagatggctgg
cccgagtgggcttcgatgccatccaatgttttgggtcaaatgaaggaaagtgtgactggt
atggtcagctctcggaaacgcagagagttggatcctgtgcaagtcaaaggatccgtggtg
tacctggagattgacaatcgtcagtgttaccagcagtctagtgaatgcttccagagcgcc
acagatgtagctgcattccttggtgcactggcctccagtgggaatctcaacgtcccctat
attgaagctgtcaccagtgtgagacccactccctccacttcagagctctaccccatgtat
gtagtctttatgggcttggctgctttgggtttcatttgcctgggtgttctggtatcccgt
aagcggcggcgagagcatggccagctctggtttcctgagggattcaaagtgtcggagccc
agcaaaaagaaacgcagagagccgttgggagaggattctgttggactgaagcctatgaaa
atctctgacatcaatcttatggatgacaatcaaaatgaatgggatgatgaggatccagac
tgcaggcgattcaggtttgaggagcaggccatgttggatttgagtgaccatactgaccat
aggaaatggacacagcagcatctggatgcagctgacctacgtattccgtctattgctcct
acccctccacagggagagatagagaatgactgcatggatgtcaatgtcagaggaccagat
ggtttcactcctttgatgatcgcctcctgcagcgggggaggacttgagactggtaatagt
gaagaggaagaggatccctcagcagaaatcatctctgacttcatttaccaaggtgccaac
cttcacaaccagactgaccgcacaggcgagactgccctccatctggctgctcggtacgcc
cgctctgatgctgccaaacgcctcctggagtctagcgctgatgccaacgttcaggacaac
atgggccgcactccgcttcacgctgctgtggctgcagatgcacagggagtgtttcagatc
ttaatccgaaaccgtgccactgatcttgatgctcgcatgcaagatggaacaacaccactc
attctggcagcccgtttggcggttgagggtatggtcgaagagcttatcaactgccacgcc
gatgctaatgccactgatgattctggtaaatctgctcttcactgggcagcggctgtaaac
aacgtggaggctgctgtagtgctgctgaaaaatggtgccaacaaagacatgcaagacaac
aaggaagagacaccactcttccttgcagcccgtgaaggcagcttcgagacagccaaggtt
cttctggaacaatttgccaatcgtgagatcacagaccatctcgaccagctgcccagagat
atcgcccaggaacgcatgcaccatgacatcgtccgccttctggatgagtacaatgtagtt
aggagtcctgggctccacagcgtccccctaagtacctccagcctctccccacctctctgc
tcccccaatgactaccttagcaaccttaagcccaccatgtctgtcaagaaggttcgcaaa
cctagctctggcggcaaaggagggaaggatgggggcaaagacaatagagtgaagaagaaa
aagtcggtggatgggaagggtaacctgctagatacatcagctgtcctatccccggttgat
tccctcgagtcaccgcatggctacctgtctgatgtggcctctcctcccatgacgtcgccc
ttccagcagtccccacctatgtctttaaaccacctacaaggcaatggagactcccatatg
ggccagatgagcatgggtaaggatatgggctgtatgtcttttgaccataaccctccacgt
ctctcacacctgcctgtgtccagccccagcagtcagggcacagcatccataggtggctgg
gtctccaggatgcaccctggtgttggccagcaaggaagtttcacgcaggcaccacccata
tcccacaacatgatgggtgctctgcatggcgtcagcactgccactctgtcacatatcatg
ggctaccagaatatgcagaccagtcacctcagctcggcacacatgatgcagcaggctcac
tcgcggcagctccagcaccagaactccaactctaccacagccgggcaatccctcaaccag
agtttcccaaacgtggagctgaacggctctgacatgcagcaaaacaacggccgctctatg
tccatccacactgtcatgccccaggagacgcagatcctcggtacacaatttctcacccct
ccctcccagcacagctactctggccccatggacaacacacctaaccaccagctacaggtg
cctgaccacccatttcttactccctcccccggctcccctgaccagtggtccagctcatcc
ccacattccaacatgtccgattggtcggaaggcatctctagcccgcctacaagtatccat
tcacagatgaatctgatcccagaccagtttaaatag
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integrated database retrieval system
