Micropterus salmoides (largemouth bass): 119915424
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Entry
119915424 CDS
T07309
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04020
Calcium signaling pathway
msam04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119915424
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119915424
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119915424
Ion channels [BR:
msam04040
]
Ligand-gated channels
Glutamate (ionotropic)
119915424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
119915424
NCBI-ProteinID:
XP_038590883
LinkDB
All DBs
Position
Unknown
AA seq
1393 aa
AA seq
DB search
MAVPRGHRPHSPWPPLFHLLLFLLLLTPSPIPLLARPLLIHPSINVAVVFSGSSYQNEVR
GRLSGENFVDLPVVVSPVTVLVNDTNPRDLLTRLCDTMATERLHGVVFEDDVGSGAGAQV
AEVAQILDFLSTQTTLPIVGISGGSAVVIPYKAEGSSFLQMGASLEQQIVCMFKLMEEYD
WGEFAVITSLLPGYDTFVDIVQSYTDTSYFLWNLQDILSLEMSVGANDARTKRMLQQVDS
QVLLAYCSYEEAQYLFHHAAEVGLLGPGYIWILPSPAVGNPDSPPPVSFPVGVIGVITDQ
WRKSLRQRVREGVAIVAKGAESFKKQYGFIPEGHGDCNKPAKHSDNNTLFRHMLNVTFER
RDLSFNNRGFLSNPSMVIIALDRERLWDKVGTYARGILQVRYPVWPRYGSFLEQVSDDRH
LTVATLEEHPFVMVENVDPGTGTCVRNTVPCRHQSNRTESIIGHSESYTKLCCKGFCIDI
LKKLSRTIKFSYDLYLVTNGKHGKLVRGTWNGMIGEVVYRRADMAIGSLTINEERSEIID
FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVG
YNRSLVSAKTPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLA
SYTANLAAFMIQEQYIDTVSGLSDKKFQKPHEHYPPFRFGTVPNGSTERNIRSNYPDMHT
HMMKYNQKGVEEALQSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGI
ALQKDSSWKRPIDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYM
LLVAMGLSLLVFAWEHLLYWKLRHSLHKSQKLDFLLAISRGIYSCFNGVEDPGRSSGLAK
PDLTSNYAQANMLKMLRTAKDLVSTANVETSLDNATKTIEQLSRHGGSLPVRIPQVATEA
VPGGFAYITENHCSLPQRSLTPPLKQQRGVTRPTPLRYTLPTHSSSCLYDRPLPVSSLSS
PHLAVGEPLPHQHPHHYQTTGRLYVDTHAHSPFIPYTDLQLPDIYASHPVSSPQNQHVQA
GFSRRKRRSKSFQCEDGEVERRKHRDQEKNDKSPVCLSELKANHLQDNHISAASVDSIYS
GEVMCPRVENYSSWPPEDLALRGRRRHRRPSFLKATWGNEQMRQLDESQSSLSSQSPSTL
PDLFPCILTPTTPAKAYNPAHLRNNLCLPRNQTYLHIREDQRRPNGRKGQRLRYSHSTHL
PTYGEAVRHGTGLGRGMVRRATSLLSRQYTHYLNSYPGLPLYHGPLDLQHHIQASSNHPS
PSPVCQLLACGGGRCGSQRALLYQDSVYGAYGVYQGSQTGSEVQVGQGAGGQPTGSPCVL
RPWRRVSSLESEV
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggccgttcccaggggacatcgtcctcactctccttggcctcctctcttccacctcctc
ctcttcctcctcctcctcacaccctcccccatccccctgctggcccggccgctcctcatc
cacccatccattaatgtggcagtggtattcagcggctccagctaccagaatgaggtcaga
ggtcgtctcagcggggaaaacttcgtggacctgcctgtggtggtcagcccagtcaccgtg
ctggtcaacgacaccaacccccgtgaccttctgacacgcctctgcgataccatggcaaca
gagagactgcatggcgtggtctttgaggatgatgtgggctcgggtgccggcgctcaggtg
gcagaagtggcacagatcctggacttcctgtccactcagacaactctgccaattgtgggc
atcagtggcggctctgcagttgtcataccatacaaggctgagggatcctccttcttgcag
atgggagcgtctctggagcagcagattgtctgcatgttcaagctcatggaggagtatgac
tggggcgagtttgctgtgatcaccagcttgctgccgggctacgacacctttgtggatata
gttcagtcctacacagatacctcctatttcctgtggaatctacaggatatcttgtctctg
gaaatgtctgttggggctaatgatgcaaggaccaagcgcatgctgcagcaggtggactct
caagtcctgctggcgtattgctcctatgaggaagcgcagtacttgtttcatcacgcagct
gaggtgggtctgctggggcctggctacatctggatcctccccagtccagccgtgggcaac
cccgacagccctccacctgtcagcttccctgttggtgttattggtgtgattacggaccag
tggaggaagagcttgcggcagagggtgagggagggtgtcgccattgtagccaagggggct
gagagcttcaagaagcagtatggttttattcctgagggacacggtgactgcaacaaacca
gctaaacactcagacaacaatactctgttcaggcacatgctgaatgtgacgttcgaaagg
agagatctgtcattcaacaaccgaggcttcctctccaacccttcaatggtcatcatcgct
ctggaccgggagagactctgggataaggtgggtacgtacgctcgagggatccttcaggtt
cgctacccggtctggcctcgatatggcagcttcctggagcaagtgtctgatgaccgtcac
ctgaccgtggccacgttggaggagcatcccttcgtaatggtcgagaacgtggacccgggc
actggcacatgcgtccgcaacacagtgccctgcaggcaccagtccaatcgcacagaaagt
attattggccactcagagtcctacaccaaattgtgctgtaaaggattctgcatagacatc
ctgaagaagttgtcccgcaccatcaagttctcctacgacctctacctagtcactaatgga
aaacacggcaagctggtccgtgggacttggaatggcatgattggggaggttgtgtataga
cgagctgacatggccattggctcgctcactatcaatgaggagcgctcggaaatcattgac
ttctccgtgccatttgttgagacaggcatcagcgtcatggtagcccgcagcaacgggaca
gtttccccatctgcctttcttgagccctacagcccagcagtttgggtcatgatgtttgtg
atgtgcctgaccgtggtggcggtgacagtttttgtgttcgaatacttcagtccagtcggt
tacaaccgcagtctggtcagcgccaaaactcccggaggtccgacgttcaccattgggaag
tcagtgtggctgttgtggggcattgttttcaacaactcagtccccattgaaaaccctaaa
ggaacaaccagtaagatcatggttctggtctgggccttctttgctgtcatcttcctggcc
tcttacactgccaacctggctgccttcatgatccaggaacaatatattgacacagtgtct
gggctctctgacaagaagttccagaaaccacatgagcattaccctccttttcgcttcggg
acggtcccaaacgggagcacagagaggaacatccgcagcaactaccccgacatgcacaca
cacatgatgaagtacaaccagaagggggtggaagaagctctacaaagcctcaaaaccggg
aagctggatgccttcatctacgacgctgctgttttgaactacatggccgggaaagatgaa
ggctgcaagctggtgactatcggcagtgggaaagtgtttgccaccacagggtatggcatc
gctttgcagaaggactccagctggaaacggcctattgacctggccctgctgcagttcctc
ggagacggagacacccagcgcttggagacggtgtggttgtcaggcatctgccagaacgag
aagaatgaagtgatgagcagcaagctggacattgacaacatggcaggcgtcttctatatg
ctcctagtggccatgggcctcagcctgcttgtctttgcctgggaacacctgctttattgg
aaactacgacactccctccacaagtctcagaaacttgacttcttgttggccatcagtagg
ggtatttacagttgtttcaatggagtggaggaccccgggcgttcttctggtttggccaaa
cctgacctgacctccaactacgctcaagcaaatatgctgaagatgcttcgcaccgccaag
gacctggtctccactgccaatgttgagacgtcactggacaacgccaccaagaccatagag
cagttgagtcgacatggcggtagcttgcctgttcgtattccacaagtcgccacagaggcc
gtaccaggaggatttgcttatattacagagaatcactgctcccttccccagcgctcccta
accccacctctgaaacaacagaggggtgtgaccaggcccacgccactgcgctacacgctt
ccgactcactcttcttcatgtctgtatgaccggccactacctgtgtccagcctcagcagc
ccacacctggctgtgggtgagccactccctcatcagcacccgcaccactaccagaccact
gggagactctacgtagacacccatgctcactctcccttcatcccttacactgatctccaa
ctacctgacatctacgcctctcacccggtgtcctcgcctcaaaaccagcacgtccaggca
ggcttctcccgacggaaacggaggtccaagagtttccagtgtgaggatggggaggtagag
aggagaaaacacagggatcaggaaaagaatgacaaaagtcctgtctgtctgagtgagctc
aaagccaaccacctccaagacaaccacatctccgccgccagcgttgacagcatctactca
ggggaggtaatgtgtcctcgggtagagaactacagctcttggcccccggaggatctcgca
ctgagagggagacgcaggcaccgccgaccctctttccttaaagcaacttggggcaacgag
cagatgcgccagcttgacgagtcccagtcatccctgtccagccagtcaccttccaccttg
ccagacctgttcccatgcattcttacaccgaccacacctgcaaaggcctacaatcctgcc
caccttcgaaacaacctgtgcctcccacggaaccagacctacctccacataagggaggac
cagaggagacccaatgggcgtaagggccagaggctgcgctactcccactccacgcacctc
cccacgtatggagaggcagtacgacatgggactgggttagggagggggatggtacggaga
gccaccagtttgctcagcagacagtacactcactacctgaactcgtaccctggactacca
ctctaccatggccccctagatctgcagcaccacatccaggcctccagcaaccacccgagc
cccagcccagtgtgccagctgctggcttgtggtggtgggagatgtggaagccagcgggct
ctgctataccaggacagcgtgtatggggcctatggggtctatcagggatcccagactgga
tcagaggtccaggtgggtcagggagcagggggccaacccacggggagcccctgcgtactt
cgtccatggcgacgggtgtccagtctggagtctgaggtctga
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