Myxococcus stipitatus: MYSTI_05094
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Entry
MYSTI_05094 CDS
T02436
Name
(GenBank) geranylgeranyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
msd
Myxococcus stipitatus
Pathway
msd00900
Terpenoid backbone biosynthesis
msd01100
Metabolic pathways
msd01110
Biosynthesis of secondary metabolites
Module
msd_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MYSTI_05094
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msd01006
]
MYSTI_05094
Enzymes [BR:
msd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
MYSTI_05094
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
MYSTI_05094
2.5.1.29 geranylgeranyl diphosphate synthase
MYSTI_05094
Prenyltransferases [BR:
msd01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
MYSTI_05094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AGC46381
UniProt:
L7UBW0
LinkDB
All DBs
Position
complement(6561205..6562098)
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AA seq
297 aa
AA seq
DB search
MAHFDLDTFLRTQQARVESLLLERAERLASSGAPPRLVESMRYSLMAGGKRLRPVLCLAF
ADTVARATLVSPLSGDAACALEFIHTYSLVHDDLPAMDDDDFRRGRPTNHKVYGEAMAIL
AGDGLLTEAFALLAHGPEPVRGALCGELAVAAGAAGMVGGQVLDTAEDRPAQLDYLVRMH
RLKTGALIRAACRMGVLAGGGDAEALVRAQMYGDAVGLAFQIADDVLDVTATREELGKPA
GADAEAGRFTFPAVVGLEESRRMAKEQVAQAVEAVRPLEGEDGPLAALARYVVERKF
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
ttggcccacttcgacctggataccttcctgcggactcagcaggcgcgggtggaatcgctg
ttgctcgagcgcgcggagcggctcgcgagctccggggcgccgcctcggctggtggagtcg
atgcggtactcgctgatggcgggaggcaagcggctgcggccggtgctgtgcctcgccttc
gcggacacggtggcgcgggccacgctcgtgtcgccgctgtccggggatgcggcgtgtgcg
ttggagttcatccacacgtactcgctggtccatgacgacctgccggccatggacgatgac
gacttccgtcgcgggcggcccaccaaccacaaggtgtacggcgaggcgatggccatcctc
gcgggcgatgggctgctgacggaggcgttcgcgctgctcgcccacgggccggagcccgtg
cgtggcgcgctgtgcggggagctcgcggtggcagcgggtgccgcgggcatggtgggcggg
caggtgctcgacacggccgaggaccgtcccgcgcagctggactacctggtgcgcatgcac
cggctgaagacgggcgccctcatccgcgccgcgtgccgcatgggcgtgctcgcgggtggc
ggtgacgcggaggcgctcgtccgcgcgcagatgtatggcgatgcggtggggctggcgttc
cagatcgccgacgacgtgctcgacgtgacggccacgcgcgaggagctgggcaagcccgcg
ggcgcggacgcggaggcggggcgcttcaccttcccggcggtggtggggttggaggagtcg
cggcggatggcgaaggagcaggtggcccaggccgtggaggcggtgcggcccctcgagggc
gaggatggtcccttggcggcgctcgcgcgctacgtggtggagcggaagttttga
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