Mesoterricola sediminis: METESE_38110
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Entry
METESE_38110 CDS
T09356
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
msea
Mesoterricola sediminis
Pathway
msea00540
Lipopolysaccharide biosynthesis
msea01100
Metabolic pathways
msea01250
Biosynthesis of nucleotide sugars
Module
msea_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
msea00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
METESE_38110 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
msea01005
]
METESE_38110 (hldD)
Enzymes [BR:
msea01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
METESE_38110 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
msea01005
]
Core region
METESE_38110 (hldD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
TrkA_N
Sacchrp_dh_NADP
KR
DUF6716
Motif
Other DBs
NCBI-ProteinID:
BDU78853
UniProt:
A0AA48HAF3
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All DBs
Position
4483928..4484869
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AA seq
313 aa
AA seq
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MLIVTGGAGFIGSNTVKELNRRGRTDILVVDNLERAEKFRNLADLTIQDYLDKRDFRARL
DAGTFDLKVDFILHNGACSDTMGTDGRYMLENNFGDSKALLNYALSKGIPFVYASSAATY
GASRAFVPEPANERPLNVYGYSKLLFDQHVRTLLPHAASPVVGLRYFNVYGPREQHKGRM
MSVLHQLLRQLRETGVCRLFDGTDGFGPGGQVRDFVHVGDVIDIGLAFATGPLVKGIFNA
GTGKARSFNAIAETLIRHLGQGRIEYIPFPRELEGKYQSFTQADLTTLRQAGYTRPMTEL
EEGIRLTLEELEA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgtcaccggcggcgccggattcatcggaagcaacaccgtcaaggagctgaac
cggcggggccggacggatatcctcgtcgtcgacaacctggagcgggccgagaagttccgg
aacctggccgacctcaccatccaggactacctggacaagcgggacttccgggcccgcctc
gacgccggcaccttcgacctcaaggtggacttcatcctccacaacggggcctgctcggac
accatgggcaccgacggccgctacatgctcgagaacaacttcggggattccaaggccctc
ctcaactacgccctctccaagggcatccccttcgtctacgccagcagcgccgcgacgtac
ggggccagccgggccttcgtgcccgagcccgccaacgagcgtcccctcaacgtgtacggc
tactccaagctcctcttcgaccagcacgtgcgcaccctcctgccccacgcggcgagcccg
gtggtgggactccgctacttcaacgtctacggcccccgggagcagcacaagggccgcatg
atgtccgtcctccaccagctcctgcgccagctgcgggagacgggggtctgccgcctcttc
gacggcaccgacggcttcgggcccggcggccaggtgcgggacttcgtccacgtgggcgac
gtcatcgacatcggcctcgccttcgccaccggccccctggtcaagggcatcttcaacgcc
ggcaccggcaaggcccgcagcttcaacgccatcgccgagaccctcatccgccacctgggc
cagggccgcatcgagtacatccccttccccagggaactcgagggcaagtaccagagcttc
acccaggccgacctcacgaccctccgccaagccggctacacccggcccatgaccgagctg
gaggagggcatccgcctcaccctcgaggagctggaagcctag
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