Methanolobus sediminis: RE474_03050
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Entry
RE474_03050 CDS
T09570
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mseb
Methanolobus sediminis
Pathway
mseb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mseb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RE474_03050 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mseb03021
]
RE474_03050 (rpoB)
Enzymes [BR:
mseb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RE474_03050 (rpoB)
Transcription machinery [BR:
mseb03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
RE474_03050 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
DUF1451
zf-NADH-PPase
Motif
Other DBs
NCBI-ProteinID:
WMW25715
UniProt:
A0AA51UP75
LinkDB
All DBs
Position
670446..672260
Genome browser
AA seq
604 aa
AA seq
DB search
MNEAKVFLNGELVGTHSDPAELVENIREQRRSGLMSEQINVTYYEDIHEVLINTDMGRAR
RPLFVVKNGEALVSDEEIELLAEGKMAYSELTKAGKIEYLDSEEEENAFIALYKNHITDK
HTHMEINPGLMLGICTGMVPYPEHNASPRNTMGAAMVKQCIGVSTSNTKLRPDTRAHLLH
YPQRAMVRTQTCESIHFDDRPAGQNFVVAVMSYEGHNIEDALVFNKGSIERGLGRSHFLR
TFEGEERRYPGGQEDKFEIPDSEFRGARSPEAYANLDIDGLVNPETRVGPNDVLIGKTSP
PRFLEEQSDFGITVEQRRESAITMRSNEKGVVDTVILTESINGTRLAKVKIRDQRIPEIG
DKFASRHGQKGVIGLIVPFADMPFTEKGMVPDLVINPHAIPSRMTVGHVLEMIGGKVGSM
EGRRVNATAFSGENEDDLRAALKTHGFAHTGKEVFFDGVTGKKIQADVFVGVILYQKLHH
MVASKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLIGHGAAMTLKERLLDESDK
VVELVCGHCGMIATFDRKRNIRYCANCGAETDIHPVEMSYAFKLLLDEIKSLGVAPRLQL
EDAV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagctaaagttttcctcaacggagaactcgtaggaacccactcagaccctgct
gaacttgtagaaaatatcagagagcagcgcaggtcagggctgatgtcagaacagatcaat
gtaacttattatgaagacatacatgaagttctgatcaacaccgacatgggtcgtgcaagg
agaccactgttcgttgtaaagaacggagaagcacttgtcagcgatgaggagatcgaactc
cttgcagaaggtaagatggcatattccgaacttacaaaggcaggaaaaatagagtacctt
gactctgaagaagaagagaatgcatttatagccctttacaagaaccatatcactgataag
cacactcacatggagatcaacccgggacttatgcttggaatatgtaccggaatggtacca
tacccggaacataatgcatccccacgtaacacaatgggtgcagcaatggtcaagcagtgt
atcggcgtatcaacatccaacaccaagctcagacctgacacccgtgcacaccttttacac
tatccacagcgtgcaatggtaaggactcagacctgcgaatccattcacttcgatgacaga
ccagccggtcagaacttcgttgtagctgtaatgtcctacgaaggccacaacattgaagat
gcactggttttcaacaagggttcaatcgagagaggacttggaagaagtcacttcctcagg
acatttgagggcgaagaaagacgttaccctggaggacaggaagacaagttcgagatccct
gactccgaattcagaggtgcacgtagccctgaagcatatgcaaaccttgacattgacggt
cttgtaaaccccgagacaagagtaggtccaaacgacgtacttatcggaaaaacaagtccg
ccacgtttccttgaggaacagtccgacttcggtatcaccgttgagcagcgcagagaaagt
gcaatcacaatgcgttccaacgagaaaggagtcgttgacacagtcattcttacagaatcc
attaacggaacacgtcttgcaaaggtcaagataagagaccagagaatccctgagatcggt
gacaagttcgcttcaagacacggtcagaaaggagttatcggacttatcgtaccatttgct
gacatgccatttacagagaaaggaatggtacctgaccttgtaatcaacccacacgcaatt
ccttcacgtatgactgtcggtcacgtgcttgaaatgatcggtggtaaggtaggttccatg
gaaggtaggagagttaatgcaactgcattctccggagagaatgaagacgatcttcgtgca
gctctcaagacccatggattcgcacacacaggaaaggaagtcttctttgatggcgtaacc
ggaaagaagatccaggcagatgtgtttgtaggagttatcctttaccagaaactgcaccac
atggtagcatcaaagatgcacgcaaggtcaagaggacctgtacaggtgcttacaaggcag
ccaactgaaggtcgtgcccgtgaaggaggtctgcgtttcggagaaatggagcgtgatgtg
cttatcggccacggtgctgcaatgacactgaaagaaagactgctcgatgagtctgacaag
gtagtagaacttgtctgcggacactgtggaatgatcgcaacctttgacaggaagagaaat
atcaggtactgtgccaactgtggtgctgagactgatatccaccctgtagagatgagttac
gcattcaaactgctgctagacgagatcaaatcccttggtgtagccccaagactgcaactt
gaggacgccgtataa
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