Microbacterium sediminis: E3O41_07620
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Entry
E3O41_07620 CDS
T06576
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
msed
Microbacterium sediminis
Pathway
msed00910
Nitrogen metabolism
msed01100
Metabolic pathways
msed01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
E3O41_07620 (nirB)
Enzymes [BR:
msed01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
E3O41_07620 (nirB)
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GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Pyr_redox
Fer2_BFD
NIR_SIR_ferr
Rubredoxin_C
NAD_binding_7
AlaDh_PNT_C
FAD_binding_3
NAD_binding_8
DAO
Shikimate_DH
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QBR74286
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Position
1603853..1606432
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AA seq
859 aa
AA seq
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MIADTLPSRRVVVVGAGMVAHRFVESLLARGDAPWRVTVVGDEGRLPYDRVGLTSYFSGR
SADDLALEAAPLRDPRVTVIPRDPVVMIDRDRRFVRTASGVEHAYDALVLATGSSAPRPA
VEGAHLPGCFVYRTIDDLERLTAFVERRSAELGRPLVGRVVGGGLLGLEAAGALRGLGVD
CTVLQSGTHLMNQQLDRAAGEVLGRLITRRGIGVRTQARSTRFDPDHTGQVAGIEFQDGS
YEAADVVIFTVGVRANDRIAREADLPSAPYGGVIIDEACRTADPAIYAIGEVASFEGRCV
GLVAPGYAMAEVAADRLSGGEASFPGYDDSTKLKLSGVDVASFGDAMATTPGALDVVYTD
PIGGVYKKLVLSDDARTLLGGILVGDASAYGSLRPLVGMPLGADPAAYLLPADGVEAPAG
DLPDEAIVCSCSSVTAGRIRGAVHDDGCADAAAVKACTKAGATCGSCFVTVKKIVGKELT
RLGQTVSTAMCEHFDLSRRQLFDAILVSELTTFSEIIGRFGRGRGCDICKPAVASILAGL
VGRHVLDGENAALQDTNDHVMANMQKDGSYSVVPRMPGGEVTPEGLIEVGQIAKDFGLYT
KITGGQRIDMFGARLEQLPLIWQRLVDAGFESGHAYGKSLRTVKSCVGSTWCRYGVLDSV
GMAVRLELRYRGLRAPHKLKLGVSGCARECAEARGKDVGVIATEHGWNMYVGGNGGFSPR
HAQLLAEGLSDAELITAIDRFFLYYIRTADRLQRTAPWLEELEGGIDGLRAVIFDDALGI
SADLDAAMARHVDGYEDEWAATLRDPEKLTRFHSFVNAPDTPDPSLAYVPERGQVRPATR
EEREGGAVLIAGTTLEVRR
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgacacgctcccctcccgccgcgtcgtcgtcgtgggcgccggcatggtcgcc
caccgcttcgtcgagagcctgctcgcgcgcggcgacgcgccgtggcgggtcaccgtcgtg
ggcgacgagggccggctgccgtacgaccgcgtcggcctgacctcgtacttcagcgggcga
tccgccgacgacctcgcgctcgaggccgccccgctgcgcgatccgcgcgtgacggtgatc
ccccgcgaccccgtggtgatgatcgaccgcgaccggcggttcgtgcgcacggcctccggc
gtcgagcacgcgtacgacgcgctcgtgctcgcgacgggctcgtcggcgccgcgccccgcg
gtggagggcgcccacctgcccggctgcttcgtgtaccgcacgatcgacgacctcgagcgg
ctgaccgcgttcgtcgagcgccgctcggcggagctcggccggcccctcgtcggccgggtg
gtcggcggcggcctgctggggctcgaggccgcgggggcgctgcgcggcctcggcgtcgac
tgcaccgtgctgcagtccggcacccacctgatgaaccagcagctcgaccgcgcggccggc
gaggtgctggggcgcctcatcacgcgccggggcatcggcgtgcgcacgcaggcacgctcg
acccgcttcgatccggatcacacgggccaggtcgcgggcatcgagttccaggacggctcg
tacgaggccgccgacgtcgtgatcttcacggtgggcgtgcgcgccaacgaccgcatcgcg
cgcgaggccgacctgcccagcgccccgtacggcggcgtgatcatcgacgaggcgtgccgc
accgccgacccggcgatctacgcgatcggcgaggtggcgagcttcgagggccggtgcgtg
gggctcgtcgccccggggtacgcgatggccgaggtcgccgccgatcgcctctcgggcggc
gaggcgtcgttccccggctacgacgactcgaccaagctcaagctctcgggcgtcgacgtc
gcgagcttcggcgacgcgatggccaccacgcccggcgcgctcgacgtcgtctacaccgat
ccgatcggcggcgtctacaagaagctcgtgctctcggacgacgcgcggaccctgctcggc
ggcatcctcgtcggcgatgcctcggcctacggctcgctgcggccgctggtggggatgccg
ctcggggccgatccggccgcctatctgctcccggcggacggtgtcgaggcgccggcgggc
gacctgcccgacgaggcgatcgtgtgctcgtgctcgagcgtgacggccggccggatccgc
ggcgcggtgcacgacgacggctgcgcggacgccgcggccgtgaaggcgtgcacgaaggcc
ggcgccacgtgcgggtcgtgcttcgtgacggtgaagaagatcgtcggcaaggagctcacg
cggctgggccagaccgtcagcaccgcgatgtgcgagcacttcgacctctcgcgtcggcag
ctcttcgacgcgatcctcgtgtcggagctgaccaccttcagcgagatcatcgggcgcttc
ggccgcgggcggggctgcgacatctgcaagcccgcggtcgcgagcatcctcgccggcctg
gtcgggcgccacgtgctcgacggcgagaacgccgcgctgcaggacaccaacgatcacgtc
atggccaacatgcagaaggacggctcgtactcggtcgtgccgcgcatgccgggcggcgag
gtgaccccggagggcctgatcgaggtcgggcagatcgcgaaggacttcgggctgtacacg
aagatcaccggcggccagcgcatcgacatgttcggcgcccggctcgagcagctgccgctc
atctggcagcgcctcgtcgacgcgggcttcgagtcggggcacgcgtacggcaagtcgctg
cgcaccgtgaagtcgtgcgtgggatcgacgtggtgccgctacggcgtgctcgactccgtg
ggcatggcggtgcggctcgagctgcgctaccggggcctgcgggcgccgcacaagctcaag
ctcggcgtctcgggctgcgcgcgggagtgcgcggaggcgcgcggcaaggacgtcggcgtg
atcgcgaccgagcacggctggaacatgtacgtgggcggcaacggcggcttcagcccgcgc
cacgcgcagctgctggccgagggactgagcgacgccgagctcatcacggccatcgaccgg
ttcttcctgtattacatccgcacggccgatcgcctgcagcgcacggcgccgtggctggag
gagctcgagggcggcatcgacgggctgcgcgcggtgatcttcgacgacgcgctcggcatc
tccgccgatctcgacgccgccatggcccggcacgtggacggctacgaggacgagtgggcg
gcgaccctgcgcgatcccgagaagctcacgcgcttccactcgttcgtcaatgcgcccgac
acccccgatccctcgctcgcctacgtgcccgagcgcggccaggtgcggcccgcgacgcgc
gaggagcgcgagggcggcgcggtgctcatcgccggcacgacgctggaggtgcgccgatga
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