Mycolicibacterium sediminis: MSEDJ_00200
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Entry
MSEDJ_00200 CDS
T07629
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei00071
Fatty acid degradation
msei00280
Valine, leucine and isoleucine degradation
msei00310
Lysine degradation
msei00362
Benzoate degradation
msei00380
Tryptophan metabolism
msei00410
beta-Alanine metabolism
msei00640
Propanoate metabolism
msei00650
Butanoate metabolism
msei00907
Pinene, camphor and geraniol degradation
msei00930
Caprolactam degradation
msei01100
Metabolic pathways
msei01110
Biosynthesis of secondary metabolites
msei01120
Microbial metabolism in diverse environments
msei01200
Carbon metabolism
msei01212
Fatty acid metabolism
Module
msei_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
MSEDJ_00200
00650 Butanoate metabolism
MSEDJ_00200
09103 Lipid metabolism
00071 Fatty acid degradation
MSEDJ_00200
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
MSEDJ_00200
00310 Lysine degradation
MSEDJ_00200
00380 Tryptophan metabolism
MSEDJ_00200
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
MSEDJ_00200
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
MSEDJ_00200
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
MSEDJ_00200
00930 Caprolactam degradation
MSEDJ_00200
Enzymes [BR:
msei01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
MSEDJ_00200
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
MSEDJ_00200
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
MSEDJ_00200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
F420_oxidored
DAO
UDPG_MGDP_dh_N
AlaDh_PNT_C
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
BBY25924
UniProt:
A0A7I7QI29
LinkDB
All DBs
Position
complement(12598..14745)
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AA seq
715 aa
AA seq
DB search
MAENTIQWEQDADGIVTLTLDDPTGSANVMNEHYQESMHNAVERLAAEKDSITGVVITSA
KKTFFAGGDLKGMINLGPENAAEAFEMVEAVKRDLRALETLGKPVVAAVNGAALGGGLEI
ALACHHRIAADVKGSQIGLPEVTLGLLPGGGGVTRTVRMFGIQKAFMEILSQGTRFKPAK
AKETGLVDDLVGSVEELVPAAKAWIKANPESHTQPWDAKGYKMPGGTPASPGLAGILPSF
PALLKKQLKGAPMPAPRAILDAAVEGAQVDFDTASRIESRYFTQLVTGQVAKNMIQAFFL
DLQYINSGGSRPDGIGKTPITKIGVLGAGMMGAGIAYVSAKAGFDVVLKDVSIEAAEKGK
NYSEKIEAKALERGRTTQEKSDALLARITPSADPADFQGVDFVIEAVFESVELKHQVFQE
IEDIVEPNALLGSNTSTLPITGLAAGVKRQDDFIGIHFFSPVDKMPLVEIIRGEKTSDEA
LARVFDYTLAIGKTPIVVNDSRGFFTSRVIGTFVNEALAMLGEGVVPASIEQAGSQAGYP
APPLQLSDELNLELMHKIAVASRKGIEDAGGTYEPHPAEAVVEKMIELERPSRLKGAGFY
DYVDGKRVGLWEGLKDTFNSGTASIPLQDMIDRMLFAEALETQKCIDEGVLTSTADANIG
SIMGIGFPPYTGGSAQFIVGYEGAGGVGKAAFVARAKDLAEKYGERFTPPASLTS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaacaccattcagtgggagcaggatgccgacggcatcgtcaccctgacgctg
gacgaccccaccgggtcggccaacgtgatgaacgagcactaccaggagtccatgcacaac
gccgtcgaacggcttgcggcggagaaggactcgatcaccggcgtcgtcatcaccagcgcg
aagaagaccttcttcgccggtggcgacctcaagggcatgatcaacctgggccccgagaac
gccgccgaggcgttcgagatggtcgaggccgtcaagcgtgacctgcgtgcgctcgagacg
ctgggcaagcccgtcgtggccgcggtcaacggtgcggccctcggcggcggcctggagatc
gccctcgcgtgtcaccaccgcatcgcggccgacgtcaagggcagccagatcggcctgccc
gaggtcaccctgggtctgctgcccggcggtggcggcgtcacccgcaccgtgcgcatgttc
ggcatccagaaggccttcatggagatcctgagccagggcacgcgcttcaagccggccaag
gccaaggagaccggtctggtcgacgacctcgtcggttccgtcgaggagctggtgcccgca
gcgaaggcgtggatcaaggccaaccccgagagccacacccagccgtgggatgccaagggc
tacaagatgcccggcggcacccccgcgtcgcccggcctggccggcatcctgccgtcgttc
ccagccctgctcaagaagcagctcaagggtgcgccgatgccggcgccgcgcgcgatcctc
gacgcggccgtcgagggtgcgcaggtcgacttcgacaccgcgagccgcatcgagagccgc
tacttcacgcagctcgtcaccggccaggtcgcgaagaacatgatccaggcgttcttcctg
gacctgcagtacatcaactcgggtgggtcacgtcccgacggcatcggcaagaccccgatc
accaagatcggcgtcctcggcgcgggcatgatgggcgcgggcatcgcgtacgtctcggcc
aaggccgggttcgacgtcgtcctcaaggacgtcagcatcgaggccgccgagaagggcaag
aactactcggagaagatcgaggccaaggcgctcgagcgcggacgcaccacccaggagaag
tccgacgcgctgctggcccgcatcacgcccagcgccgacccggccgacttccagggcgtc
gacttcgtcatcgaggcggtgttcgagtcggtcgagttgaagcaccaggtgttccaggag
atcgaggacatcgtggagcccaacgcgctgctggggtcgaacacctcgacgctgcccatc
accggtctcgcggccggggtgaagcgccaggacgacttcatcggcatccacttcttctcg
ccggtcgacaagatgccgctggtcgagatcatcaggggcgagaagacgtccgacgaggcg
ctggcccgcgtgttcgactacaccctggccatcggcaagacgccgatcgtggtgaacgac
agccgcggcttcttcaccagccgcgtcatcggcacgttcgtcaacgaggcgctggcgatg
ctgggcgagggcgtcgtcccggccagcatcgagcaggcgggttcgcaggccggctacccg
gcgccgccgctgcagctgtccgacgagctgaacctcgaactgatgcacaagatcgcggtc
gccagccgcaagggcatcgaggacgcgggcggcacgtacgagccgcacccggccgaggcg
gtcgtcgagaagatgatcgaactcgagcgtccgtcgcggctcaagggcgcgggcttctac
gattacgtcgacggcaagcgcgtcggcctgtgggaggggctgaaggacaccttcaactcc
ggcaccgcgtcgattccgttgcaggacatgatcgatcgcatgctgttcgccgaggcgctc
gagacgcagaagtgcatcgacgagggtgtgctcacgtcgaccgcggacgcgaacatcggc
tcgatcatgggcatcggcttcccgccctacaccggcggtagcgcgcagttcatcgtcggc
tacgagggtgccggcggcgtcggcaaggcggccttcgtggcccgtgccaaggacctggcc
gagaagtacggcgagcggttcaccccgcccgcctcgctcaccagctag
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