Mycolicibacterium sediminis: MSEDJ_22790
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Entry
MSEDJ_22790 CDS
T07629
Symbol
ydiP
Name
(GenBank) putative BsuMI modification methylase subunit YdiP
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei00270
Cysteine and methionine metabolism
msei01100
Metabolic pathways
Module
msei_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
MSEDJ_22790 (ydiP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msei03000
]
MSEDJ_22790 (ydiP)
03032 DNA replication proteins [BR:
msei03032
]
MSEDJ_22790 (ydiP)
03036 Chromosome and associated proteins [BR:
msei03036
]
MSEDJ_22790 (ydiP)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
msei02048
]
MSEDJ_22790 (ydiP)
Enzymes [BR:
msei01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
MSEDJ_22790 (ydiP)
Transcription factors [BR:
msei03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
MSEDJ_22790 (ydiP)
DNA replication proteins [BR:
msei03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
MSEDJ_22790 (ydiP)
Chromosome and associated proteins [BR:
msei03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
MSEDJ_22790 (ydiP)
Prokaryotic defense system [BR:
msei02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
MSEDJ_22790 (ydiP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
BBY28183
UniProt:
A0A7I7QP85
LinkDB
All DBs
Position
complement(2341982..2343115)
Genome browser
AA seq
377 aa
AA seq
DB search
MTLTVAGLFAGIGGLELGMTAGGHRTALLVENNPVAAHVLRRRFPDTPIESDVRDVDALP
RGTDLLVAGFPCQDLSSVGRKAGITGARSSLVGEALRLARRSDVPWLVLENVPFLMSLNG
GAALRLVTESLTALGYRWAYRVVDTNAFGLPQRRNRWYLVASRDGDPRDVLLADDAERPE
AIATYPDVACGFYWTEGTRSFGWAVDAVPPIKCGSSVGVASPPAIRLPSGEYVTPDIRDA
ERLQGFPSDWTAPADEVAKGGERWRMVGNSVSVPVAAWIGRRLDEPGRYDAADDEPWAGP
RWPRKAAWADTDGVVYGADVGPWPQWADRVPLEHFLQHPGKPLSGRAATGFISRTHKGSL
RFPPGFVDELTDYAAAR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgaccgtcgcgggactgttcgccgggatcggcggcctcgaactcggcatgaca
gctggcggccaccgcaccgcactgctggtcgagaacaatcccgtcgccgcgcacgtgctg
cgccgccgcttccccgacacgccgatcgagagcgacgtccgcgacgtcgacgcgctcccc
cgcggcaccgacctgctcgtcgccggattcccctgccaggacctcagcagcgtcggccgc
aaggccggaatcaccggtgcgcgaagcagtctcgtcggcgaggcactgcgactcgcccgg
cgctccgacgtgccgtggctggtgctggagaacgtgccgttcctcatgtcgctcaacggg
ggcgcggcgctgcggctggtcaccgaatcgctgaccgcgctgggctaccggtgggcgtac
cgcgtcgtcgacaccaacgccttcggcctgccgcagcggcgcaaccggtggtacctggtg
gcgagccgcgacggcgacccccgcgacgtgctgctggccgacgacgccgagagaccggaa
gcgatcgccacctacccggacgtcgcctgcggcttctactggaccgagggcacgaggtcg
ttcggctgggcggtcgacgcggttccaccgatcaagtgcgggtcgtcggtgggggtggcg
tcacccccggcgattcggctgccgtcgggcgagtacgtgacccccgacatccgggatgcc
gaacggctgcagggctttccgagcgactggaccgccccggccgacgaggtcgccaaaggc
ggtgaacgctggcgcatggtgggcaactcggtgagcgtgccggtggccgcgtggatcggc
cgacgtctcgacgagcccggacgctacgacgccgctgacgacgaaccgtgggcgggaccc
aggtggccgcggaaggcggcatgggccgacaccgatggcgtcgtgtacggggctgacgtg
gggccgtggccgcagtgggcggacagggtgccgctggagcacttcctgcagcaccccggg
aagccgctctccggccgcgcggcaaccggcttcatcagccgaacgcacaagggcagcttg
cgttttccgccgggcttcgtcgacgaactgaccgactacgccgccgcgcggtga
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