Mycolicibacterium sediminis: MSEDJ_55180
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Entry
MSEDJ_55180 CDS
T07629
Symbol
uppS_2
Name
(GenBank) (2Z,6E)-farnesyl diphosphate synthase
KO
K12503
short-chain Z-isoprenyl diphosphate synthase [EC:
2.5.1.68
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei00900
Terpenoid backbone biosynthesis
msei01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MSEDJ_55180 (uppS_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msei01006
]
MSEDJ_55180 (uppS_2)
Enzymes [BR:
msei01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.68 (2Z,6E)-farnesyl diphosphate synthase
MSEDJ_55180 (uppS_2)
Prenyltransferases [BR:
msei01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
MSEDJ_55180 (uppS_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prenyltransf
DUF6570
Motif
Other DBs
NCBI-ProteinID:
BBY31422
UniProt:
A0A7I7QYP7
LinkDB
All DBs
Position
complement(5754969..5755760)
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AA seq
263 aa
AA seq
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MEIIPPRLKEPAYRIYELRLRQELSRAKDDLPRHIAVLCDGNRRWARDAGHDDVSYGYRV
GAAKIAEMLRWCQEAGVEMATVYLLSTENLQRDPGELSELIGIITDVVEEICAPANRWSV
RTVGDLELLGEEPAKRLRDAVDSTTAAAGRFHVNVAVGYGGRQEIVNAVRALLGKELANG
VTGEGLIDAVTVDAISQNLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWP
AFRRVDFLRALRDFTLRHRRYGH
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtggagatcattcccccgcgtctcaaggaaccggcctaccggatctatgagttgcggttg
cgacaggagttgtcgcgcgccaaagacgatctgccacggcacatcgcggttctgtgcgac
ggcaaccggcgctgggcacgtgacgcgggccacgacgacgtcagctacggctatcgggtc
ggggccgccaagatcgccgagatgctgcggtggtgccaggaggccggcgtcgagatggcg
accgtctacctcctctcgacggagaacctgcagcgcgatcccggcgaactctccgagctg
atcgggatcatcaccgacgtcgtggaggagatctgcgcgcccgccaaccggtggagcgtg
cgcaccgtcggcgatcttgaactgctgggcgaggaacccgccaagcggctgcgcgacgcc
gtcgactcgaccacggccgccgccggcaggttccacgtcaacgtcgcggtcggctatggc
ggtaggcaggagatcgtcaacgccgtccgcgcgctgctgggcaaggaactcgccaacggc
gtcaccggcgagggactgatcgacgccgtgaccgtcgacgcgatctcccagaacctctac
acgtccggacaacccgaccccgacctggtgatccggacgtccggcgagcagcgactgtcg
ggcttcctgctctggcagagcgcctattccgagatgtggttcaccgaggcgcactggccg
gcgttccggcgggtcgacttcctgcgcgcgctgcgcgacttcaccctgcggcaccggcgc
tacggtcactag
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