Manduca sexta (tobacco hornworm): 115446938
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Entry
115446938 CDS
T07401
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03020
RNA polymerase
msex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115446938
09124 Replication and repair
03420 Nucleotide excision repair
115446938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msex03021
]
115446938
03400 DNA repair and recombination proteins [BR:
msex03400
]
115446938
Transcription machinery [BR:
msex03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
115446938
DNA repair and recombination proteins [BR:
msex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
115446938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
115446938
NCBI-ProteinID:
XP_030029646
LinkDB
All DBs
Position
13:complement(10414000..10415176)
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AA seq
275 aa
AA seq
DB search
MPYANQPSVHITELTDDNVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLS
DEFLAHRIGLIPLISDDVVDKIRYSRDCMCADFCSECSVEFTLDVKCTDDQTRHVTTADL
KSSDPRVVPVTSRHRDEDQADYGEADEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNAMRHTLYPKPDEWPKSEHTELDEDQYEAEFNWEAKPNKFFYNVESSGALK
PENIVLMGIVVLKNKLLNLQVQLAQEAQHDALAIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccatacgctaatcagccttctgttcatataaccgaactcacagatgacaatgttaaa
ttcgttgtggaagataccgaactaagtgttgcgaatagcatgaggcgagtattcattgcc
gaaacgccaacgatggctattgattgggtccaacttgaggccaactccacagtactcagt
gacgagtttctggctcatcgtattggacttatacctctaatatctgacgacgtcgttgac
aaaatccgatactcaagagattgtatgtgcgccgatttctgttcagagtgcagtgtggag
tttactcttgatgtgaagtgcacagacgaccagacacgccatgtcaccactgcagattta
aagtctagcgatccgagagtggtgcctgtgacatcgcggcaccgtgatgaagaccaggct
gattatggtgaggctgatgaaatattaataatcaaattgcgtaaaggacaagaattgaag
ttacgcgcatatgcaaagaaggggtttggaaaggagcatgctaaatggaacccgacagca
ggtgtttcgtttgaatatgatccagataatgcaatgagacacactttgtaccctaaacct
gatgaatggcccaagagtgagcacacagaacttgacgaggaccagtatgaagcagaattc
aattgggaagcaaaaccaaataagtttttctataatgtagagtcatcgggagctttgaag
ccagagaatattgtcttgatgggtatagttgtattgaaaaacaaactattgaatctacaa
gtgcaattagcacaagaagcacagcatgatgcactggcaattaattaa
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