Manduca sexta (tobacco hornworm): 115447098
Help
Entry
115447098 CDS
T07401
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115447098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msex03021
]
115447098
Enzymes [BR:
msex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115447098
Transcription machinery [BR:
msex03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
115447098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
115447098
NCBI-ProteinID:
XP_030029888
LinkDB
All DBs
Position
18:2217314..2230176
Genome browser
AA seq
1125 aa
AA seq
DB search
MDSKKVDEGPSLAYTSSPDYRNPPKIANPYLQCLGAPHIDSFNYMLQDGLKAAIDDLLPV
EFELPGGERVKVTIDEAAFAKPSVPMDAVGVKTQRVLPTECRQRAATYRGDFKVRVTLSI
DERTVTIDRSLGFLPIMIKSKMCHLNDLSPKELVEHNEHADEWGGYFVIKGHERLARMLL
VTRRNYPVAIKRSGWRMRGNLFSDYGVMIRSVTADQTSTNNVLHFLTNGTCKLMFSYRKM
MYYAPLLLILKCLVDWPDHYIYQQLLQHNKNDLYYVNCIQNMLRELHEEGLHTSDECRLY
LGRMFRAKLYELPPWCDDRQAAAFLLRRCVMIHLDKDEDKFNGLVFMVQKLYDLVQNKCK
VEGADAVMMQEVMVGGHLYLQVLKERLQNILNNIRIQILKRAKTTSKLVIGTKELQQILR
ACGSLEQKMETFLATGNAPSNNVTLSQYKGLTIVAENINRMRYMSHFKSIHRGSFFLEMR
TTEARALLPDAWGFVCPVHTPDGAPCGLLNHLTMPAQVTQRPDPKLVANLPFVLEKCGME
PISSVSRAVLHNVYKYPVFIDGRLVGYFSEDTVDDSAAYFRTLKIKGEEVPITTEIVVIP
KKQICAQYPGVFIITSEARMMRPVINLASSQLELIGTMEQLYLDIAITPQEVHKGKTTHM
ELSKSAFMSNLAQLVPMPDCNQSPRNMYQCQMGKQTMGTPIHTWPTNAETKLYRLQTPAT
PLFRPQHYDRVGLDDFPAGTNAIVAVISYTGYDMEDAMIINKSAYERGFAAGTVYKADFI
ELQHVSSYFCRDDSKNLSQYIDADGLPAVGARVKPDDPFYCYYDGEKNQFMVSRYHGKEE
VFVDSVRLCGDFSGKALKKACIMLRIQRNPTVGDKFASRAGQKGICSQKWAAEDLPFTES
GLIPDILFNPHGFPSRMTIAMMIECMAGKAASLHGHVHDASPFRFNEKDTAINYFGRLLE
AGGYNYYGTERMYSGVDGREMKADIFFGVIHYQRLRHMVSDKWQVRTTGAVDALTRQPVK
GRRRGGGVRLGEMERDALVSHGAAFLLHDRLFLCSDKTEAVVCTKCGTLLGPIVGQAESS
DECRLCGESTLASVAVPYIFKFFVTQLACVNINCKINCAKAIEGA
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaagaaagtagacgaaggtccgtcactggcctacacgagcagcccagattat
agaaacccaccaaaaatcgcaaatccgtacttacaatgccttggagcaccccacatagac
tccttcaactacatgcttcaagacgggctgaaagcagcaatagatgacctgctacctgta
gaatttgagttacctggtggggaacgggtcaaagtgacaatagacgaagcagcctttgca
aagccaagtgtgcccatggacgcagtgggggttaagacacagagggtgctgccgacggag
tgcagacaacgagcagccacatataggggggattttaaagtcagagttacattatcaata
gatgaacggacggtcacaattgataggtctctgggcttcttaccgattatgattaagtca
aaaatgtgccacctgaatgatctgtctcccaaggaactggtggaacacaatgaacatgct
gatgaatggggaggatattttgttataaagggtcacgagcggttggcccgtatgttactg
gtcactaggaggaactatccggtcgcgatcaagcggtctggctggaggatgagagggaat
ctgttctctgattacggtgtcatgatacgcagtgtgaccgctgatcagactagtactaac
aatgtcttgcatttcctaacaaacggcacatgcaagctgatgttctcgtaccgcaagatg
atgtactacgcaccactgctgctgatcctcaagtgcctggtggactggcccgaccactac
atataccaacaactgctgcaacacaacaagaacgatctgtattatgtcaattgcatccag
aacatgctccgcgagctgcacgaggaaggcctgcatacctcagacgagtgccggctgtac
ctgggccgcatgttccgcgccaagctgtacgagctgccgccctggtgcgacgaccggcaa
gccgccgccttcctgctgcgccgctgcgtcatgatacacctggacaaggatgaggacaag
ttcaatgggctcgtgtttatggtgcagaagctctatgatttggtccagaataagtgtaag
gtggaaggcgccgacgcggtgatgatgcaagaggtgatggtgggtggtcacctgtacctg
caggtattgaaggagcgtctgcagaatatactgaacaacatccggatacagatactgaag
cgagcgaagaccacgtcaaaacttgttataggaacgaaagagctgcaacaaatcctccgc
gcgtgcggcagcctcgagcagaagatggagacgttcctggcgaccggcaacgcgccctcc
aacaacgtcacgctgtcgcagtacaaggggctcaccatcgtcgccgagaacatcaacagg
atgcgatacatgtcgcattttaagtcgatccaccgcggctcgttcttcctggagatgcgc
acgacggaggcgcgcgcgctgctgccggacgcgtgggggttcgtgtgcccggtgcacacg
cccgacggcgcgccctgcggcctgctcaaccacctcaccatgcccgcgcaggtcacacaa
cggcctgatccaaaattagtagcaaatttaccgttcgttctggagaaatgcggaatggaa
cccataagctcagtgtcgcgagcggtcttgcacaacgtgtacaagtatccggtgttcatc
gacggacggctggtgggctacttctcagaagacactgtagatgactccgcggcgtacttc
aggactttgaagatcaagggggaagaagttcctatcactacggagatcgtcgtcatacct
aagaagcagatctgcgcgcaatacccaggcgtgttcataataacgagtgaagctagaatg
atgcgaccggtcatcaacctggccagctcgcagctcgagctgatcggcaccatggagcag
ttgtacttagacatcgctatcacaccgcaggaagtgcataaaggtaaaaccacccacatg
gaactgtccaagtccgcgttcatgagtaacctggcgcagctggtgccgatgcctgactgc
aaccagtcgccgcgtaacatgtaccagtgccagatgggcaagcagacgatgggcacgccg
atccacacgtggcccacgaacgcggagacgaagctgtaccggctgcagacgcccgccacg
ccgctgttccggccgcagcactacgaccgcgtcggcctcgacgacttccccgccggcacc
aacgccatcgtcgccgtcatctcttacacgggctacgacatggaagacgcgatgataata
aacaaatcggcgtacgagcgagggtttgcagctggcaccgtctacaaggcggacttcatc
gagctgcagcacgtcagctcgtacttctgccgcgacgactccaagaacctcagccagtac
atcgacgcggacggactgccagccgtcggcgccagggtcaagcctgatgatcctttctac
tgttattacgacggcgagaagaaccagttcatggtgagccggtaccacggcaaggaggag
gtgttcgtggacagcgtgaggctgtgcggcgacttcagcggtaaagcattgaagaaggcc
tgcattatgttgaggatacaacgtaacccaactgtgggcgacaagttcgcctctcgagcg
ggacagaaaggtatctgttctcaaaagtgggctgccgaggacctgcctttcacggaatct
ggactgatcccggacatcctgttcaacccgcacgggttccccagtcgtatgaccatcgcc
atgatgatcgagtgtatggcagggaaagctgccagtctccacggacatgtacacgacgcg
tcaccgttcagattcaacgagaaagacacggcgataaactacttcggtcggctgctagag
gccggcgggtacaactactacggcaccgagcgcatgtacagcggagtggacgggcgagag
atgaaggcggatatattcttcggagtgatacactaccagcggctccggcacatggtgtcg
gataagtggcaggtgcgcacgacgggcgcggtggacgcgctgacgcggcagccggtgaag
gggcggcggcgcggcggcggcgtgcgcctcggcgagatggagcgcgacgcgctcgtgtcg
cacggcgccgccttcctgctgcacgaccgcctcttcctctgctccgacaagaccgaggct
gtggtgtgcaccaaatgcgggacgctcctaggtcccatagtgggccaagcggagagctca
gacgagtgcaggctgtgcggcgagtcgaccctggccagcgtcgccgtgccatacatattc
aagttcttcgtcacacaactcgcatgcgtcaatattaactgcaagatcaactgtgctaaa
gctattgagggagcttag
DBGET
integrated database retrieval system
