Mycobacterium shigaense: MSG_03938
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Entry
MSG_03938 CDS
T05717
Name
(GenBank) (2Z,6E)-farnesyl diphosphate synthase
KO
K12503
short-chain Z-isoprenyl diphosphate synthase [EC:
2.5.1.68
]
Organism
mshg
Mycobacterium shigaense
Pathway
mshg00900
Terpenoid backbone biosynthesis
mshg01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mshg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MSG_03938
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mshg01006
]
MSG_03938
Enzymes [BR:
mshg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.68 (2Z,6E)-farnesyl diphosphate synthase
MSG_03938
Prenyltransferases [BR:
mshg01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
MSG_03938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prenyltransf
DUF6225
Motif
Other DBs
NCBI-ProteinID:
BAX94063
UniProt:
A0A1Z4EM25
LinkDB
All DBs
Position
complement(4215110..4215898)
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AA seq
262 aa
AA seq
DB search
MDVIPPRLKEPLYRVYEMRLRQGLAASKSELPRHIAVLCDGNRRWARDAGYVDVSYGYRM
GAAKIAEMLRWCEQAGIEMTTIYLLSTENLQRDPDELAALIEIITDVVEEICAPANRWSV
RTVGDLELLGEEPARRLRDAVESTPGVAPFHVNVAVAYGGRREIVDAVRALLSKQLANGA
TGEELVEAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFCEAHWPA
FRRVDFLRALRDYSQRHRRHGK
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtggacgttatcccgccacggctcaaggagccgttgtaccgcgtctacgagatgcggctg
cggcaggggctggccgcctcgaagtccgagctgccccggcacatcgcggtgctgtgcgat
ggcaaccggcgctgggcgcgcgatgcgggctacgtcgacgtcagctacggctaccgcatg
ggcgcggcgaagatcgccgagatgctgcgctggtgcgagcaggccggcatcgagatgacc
accatctacctgctgtcgaccgaaaacctgcagcgcgaccccgacgagctggccgcgctc
atcgagatcatcaccgacgtcgtcgaggagatctgcgcgccggcgaaccgctggagcgtg
cgcaccgtcggcgacctcgaactactcggcgaggaaccggcgcgccggctgcgcgacgcg
gtggagtcgacgccgggggtggccccgttccacgtcaacgtcgcggtcgcctacggcggg
cgccgcgagatcgtcgacgcggtgcgcgccttgctcagcaagcaacttgccaacggcgcg
acgggtgaggagctcgtcgaggcggtgaccgtcgagggcatctccgaaaacctgtacacc
tcggggcaacccgatccggatctggtgatccgcacctcgggggagcagcggctgtccggc
ttcctgctgtggcagagcgcgtactcggagatgtggttctgcgaagcgcactggcccgca
ttccgccgggtcgacttcctgcgtgccctgcgtgactacagccagcgacaccgccggcac
ggcaagtaa
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