Magnolia sinica: 131231180 Help Entry 131231180         CDS       T09699                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism msin  Magnolia sinica Pathway msin03430   Mismatch repair Brite KEGG Orthology (KO) [BR:msin00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     131231180  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:msin03400]     131231180 DNA repair and recombination proteins [BR:msin03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      131231180 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor Motif Other DBs NCBI-GeneID:  131231180 NCBI-ProteinID:  XP_058083278 LinkDB All DBs Position 17:6843097..6864582 Genome browser AA seq 1304 aa AA seqDB search MAPSRRLSNGRSPVVNPQRQITSFFTPGKSPISPPSSISLKESPRPSPNPNPSPPFQTKR KKPVLVVGPSPARRSPNSTPSSELGKTSYSGDVVGKRIRVFWPLDKSWYEGWVKSFDDRT GKHVVQYDDAEEEVLDLGNEKIEWVEDVVRSFRRLRRSSVCEEVVPEKEEVVDDGSGGND GGDGDDNDDSMDEDWGKNVGKEEEDVASEEVELDEDDEEVERSRRGRARNSGSGKRKKIK VEKLGSGKKSRVSGNGEKGVSKAAFDWSGSKTVRLPSNAETAIALPNGDNILMGDAAERF GKREAEKLGFLGPKRKDACGRLPGDVNYDPRTLYLPPSFLKSLSGGQRQWWEFKSKHMDK VLFFKMGKFYELFEMDAHVGARELDLQYMKGEQPHCGFPEKNFSMNVEKLARKGYRVLVV EQTETPEQLELRRKETGSRDKVVKREICAIVTKGTLTEGEMLAVNPDPPYLMSVTETHQT SGTPEDDIVVGVCLLDVSTSRFIIGQFTDDSERHCLCSILSELRPVEIIKPIKVLSPETE SVLRKQTRSPLVNDLVPMKEFWDAEKTVEEVKNIYRVCKDGVPGSLSKAAVGVPPDYGSM ENGSGCLPDVLSELINAGENGNSALSALGGCLFYLRQALLDETLLKFAKFELLPCSGLLH TLQKTYMSLDAAALENLEILENNKNGGSSGTLFSQLDHCVTAFGKRLLKNWLARPLYHMR SIVERQDAIASLKGVAQASALQFQREVSRIPDMERLLVRLFASCEASGRNANKVIFYEDA SKKLLKEFIAALRGCELMAQACSSFSAILNSTESCLLSQLLTPGKLLPDIDPILKHFKDA FDWSEADLSGRIVPHGVDIEYDSACKAVKEIEFSLSNHLKEQHEVLGDKTLKYVTVGKDE YLLEVPESLRGKIPRDYELQSSIKGYFRYWTPKIKKLLAELSQAEDEKESKLKSILQRLI GQFCEHHFKWRQLVSAIAELDVLISLAIASGYYEGPTCRPTIIDISCSREAVPCLAAKSL GHPVLRSDALGKCSFVPNDVNVGGVGHPSFILLTGPNMGGKSTLLRQICLTVILAQIGAD VPAESFELSPVDQIFVRMGARDHIMAGQSTFLTELSETAAMLSSATNNSLVALDELGRGT STSDGQAIAESVLEHFVQKIKCRGIFSTHYHRLAVDYEEDPHVSLCHMACQVGKGVGGVE EVIFLYRLTPGACPKSYGVNVARLAGLPESVLHKAAAKSSEFEAIYGKHRHGSQGQTSGC VSDDEVTTIRDVLHAAIASDANENMDMGLLSNLQQRVRLLLQGN NT seq 3915 nt NT seq  +upstreamnt  +downstreamnt atggccccttcccgccgtctcagcaatggtcgatctccagtagtcaacccgcagcgtcag atcacctccttcttcacaccaggaaagtctccgatctctcctccgtcttcgatatcgctc aaagaaagccctaggcctagccctaaccctaaccctagtcctcctttccaaaccaagagg aaaaagcctgttctagttgtgggaccatctcctgcccgccgctcgccgaattccacgcct tcctccgaattgggaaagacatcatactcaggagacgtcgttgggaagaggattagggtt ttctggcctttggataagagctggtacgaaggttgggtgaagtcgttcgatgatcggacc ggcaagcatgttgttcagtacgatgatgcggaggaggaggttttggatctcggaaatgag aagattgaatgggtggaggacgtggtgaggagcttccgccggttgcggcggagttcggtt tgtgaggaggtagtgcctgagaaggaggaggttgtggatgatgggagtggcggaaatgat ggtggcgatggtgacgacaatgatgattcaatggatgaggattgggggaagaatgtaggg aaggaggaggaagatgttgcttccgaggaggtggaattggatgaagatgatgaggaagtg gagaggtcgagacgaggccgggcgagaaactcggggtctggaaagcggaagaagattaaa gtggagaagttgggttctgggaagaagagtagggttagtggaaatggggaaaagggtgtg tcgaaggctgcttttgattggagcggaagtaaaactgtgcggcttccaagcaacgcagaa acggcgattgcattacctaatggtgacaacattttaatgggcgatgccgcagaacgattt ggaaagcgcgaggcagaaaagctggggtttcttggaccaaaacggaaggatgcatgtggg agactgcctggggatgtaaactatgatccaagaactctttacttgccacccagtttcttg aagagtttgtcaggtggacagagacaatggtgggagttcaagtcaaagcatatggacaag gttctgtttttcaagatgggcaaattctatgaattgtttgaaatggatgcacatgtagga gcaagagaacttgatttgcaatacatgaagggagaacagcctcattgtggatttccagaa aagaacttctcgatgaatgtggagaaattggcaagaaagggctatcgggttcttgttgtg gagcagacagagacacctgaacagcttgaacttcgtcgtaaagagacgggttctagagat aaggttgtgaaacgtgaaatctgtgccattgttacaaagggaactctaactgagggagag atgctagctgtgaaccctgatcctccatacttgatgtcagttaccgaaactcatcaaact tctgggaccccagaagatgacatagttgttggggtttgtctgcttgatgtttctacgagc agatttattattggacagtttactgatgattcagaacgtcattgcttatgttcaatattg tctgagctgagacctgtggaaatcataaagcctatcaaagttctcagccctgaaactgaa agtgttttgcggaaacaaacaagaagtcctttagtcaatgatttggttcctatgaaagaa ttctgggatgctgaaaaaactgttgaggaggtcaaaaatatttatagagtatgcaaggat ggagtaccgggatccttgagcaaggcagctgtaggtgttcctcccgattatggcagcatg gagaatggatcgggatgcctaccagatgtcttatctgagctaataaatgcaggcgagaat gggaactctgcactttctgctcttggtggctgtcttttttatctaagacaagcattgcta gatgagactctgcttaagtttgcgaagtttgaacttcttccgtgctcggggttacttcat actctgcaaaaaacatatatgtcactcgatgcagccgcgctagagaacctggagatactt gaaaacaacaaaaatggaggttcctcagggacactattttcacaattagatcactgtgtg actgcatttggtaaaaggttgcttaaaaattggcttgcaagaccactctatcacatgagg tcaattgtggagcgtcaagatgccatagcaagtttgaaaggtgtcgctcaagcttctgca cttcaatttcaaagagaggtatctaggattccagacatggagcgtcttcttgtgcgcctc tttgctagctgtgaagcaagtggaagaaatgccaataaagtaattttttatgaggatgca tctaagaaactccttaaagagttcattgctgctcttcgtggttgcgaattgatggcccaa gcatgttcttcttttagtgccattttgaatagcactgaatcttgcctactcagtcagtta ctaacaccaggcaaactccttcctgacattgatccaattttaaagcatttcaaggatgct tttgattggtcagaagctgatctttcgggacgcattgtacctcatggagtagatattgaa tatgactctgcttgcaaagcagttaaggagattgaatttagtttgtcaaaccacctgaag gagcaacatgaagtacttggagataaaactctcaaatatgttactgttggaaaagacgaa tatctactagaagtacctgagagtctgcgagggaaaattcctcgggactatgagttacaa tcatccataaagggatacttcaggtattggactccaaaaattaagaagttgctagcagaa ctttctcaagctgaagatgagaaggaatctaaattgaaaagcattttacaaaggttgatt gggcagttctgtgagcatcatttcaagtggaggcaattggtttctgcaattgcagagcta gatgttttgataagtttggcaattgcaagtggctactatgaagggccgacctgccgccca actatcatagacatttcttgttcacgtgaagctgttccatgtttggctgctaaaagttta gggcatcctgttctcagaagtgatgccttggggaagtgttcttttgtccccaatgatgtg aatgttggtggagttggacaccccagctttatccttctcactggtcccaacatgggcgga aaatccactctccttcgccaaatttgcttgactgtgattttggcacagattggagcagat gttcctgcagaaagctttgagttgtcacccgtcgatcaaatctttgttcgaatgggtgct agggaccatataatggcaggccaaagtacattcctaactgaactttcagagactgcagct atgctgtcgtctgctaccaataattcgctggtggcattggatgaacttggacgggggaca tcaacttcagatggacaagctattgcagaatctgtattagagcattttgtccagaaaatt aagtgtcgcggcatattttccactcactatcaccggttagctgtggactatgaggaagat ccccatgtgtctctatgccatatggcatgccaagttgggaaaggggttggaggtgttgaa gaagtcatattcctttacagactgacacctggtgcatgtcccaaaagttatggtgttaat gttgcacgtttggcagggcttcctgagtctgttcttcataaggctgcagcaaagtcgagt gagttcgaagcaatatatggtaagcacagacatggatcccaaggtcagacgtctgggtgc gtcagtgatgatgaagtcacaaccatccgagatgtccttcatgctgccatagcatcagac gccaatgagaacatggacatggggttgttgagcaaccttcaacagagagtaagattgttg cttcaggggaactga

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