KEGG   Magnolia sinica: 131232865
Entry
131232865         CDS       T09699                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
msin  Magnolia sinica
Pathway
msin03020  RNA polymerase
msin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    131232865
  09124 Replication and repair
   03420 Nucleotide excision repair
    131232865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msin03021]
    131232865
   03400 DNA repair and recombination proteins [BR:msin03400]
    131232865
Transcription machinery [BR:msin03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     131232865
  RNA polymerase III system
   RNA polymerase III
     131232865
  RNA polymerase I system
   RNA polymerase I
     131232865
DNA repair and recombination proteins [BR:msin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      131232865
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 131232865
NCBI-ProteinID: XP_058085354
LinkDB
Position
18:complement(18257365..18268925)
AA seq 144 aa
MADEDYNDDIGAYDDEPPEPEPEEGAEEDVENNNEEAPDAFVGTEGEEKEEEQPVQRPRK
TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
GSYEDWGVDELIVEDSWKRQVGGD
NT seq 435 nt   +upstreamnt  +downstreamnt
atggctgacgaagactacaacgacgacatcggggcatatgatgatgagccgccagaacct
gagcctgaggaaggagcagaagaggatgtagaaaataataacgaagaggctcctgatgct
tttgttgggactgaaggtgaggagaaagaggaggagcaaccagtacaacgtcctcggaag
acatcaaaatacatgacgaagtatgagcgtgcaagaatcttgggcacccgcgccctgcag
atcagcatgaatgccccagtgatggttgagttggagggtgagactgatccgctggagatt
gcaatgaaagagcttcgggagcgcaagataccatttacgatccgtcgctatttgccagat
ggaagttatgaggactggggggttgatgagctgattgtagaagactcttggaagaggcaa
gttggaggtgactga

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