KEGG   Magnolia sinica: 131240909
Entry
131240909         CDS       T09699                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
msin  Magnolia sinica
Pathway
msin03020  RNA polymerase
msin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    131240909
  09124 Replication and repair
   03420 Nucleotide excision repair
    131240909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msin03021]
    131240909
   03400 DNA repair and recombination proteins [BR:msin03400]
    131240909
Transcription machinery [BR:msin03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     131240909
  RNA polymerase III system
   RNA polymerase III
     131240909
  RNA polymerase I system
   RNA polymerase I
     131240909
DNA repair and recombination proteins [BR:msin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      131240909
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 131240909
NCBI-ProteinID: XP_058095424
LinkDB
Position
3:117141340..117148248
AA seq 143 aa
MADEDYNDDIGAYDDEPPEPEPEEGAEEDLENNNEEPPDAFVGTEGEEKEEQPVQRPRKT
SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
SYEDWGVDELIVEDSWKRQVGGD
NT seq 432 nt   +upstreamnt  +downstreamnt
atggctgacgaagactacaacgacgacatcggggcatatgatgatgagccgccagaacct
gagcctgaggaaggagcagaagaggatttggaaaataataacgaagagcctcctgatgct
tttgttgggactgaaggtgaggagaaagaggagcaaccagtacaacggcctcggaagacg
tcaaaatacatgacaaagtatgagcgtgcaagaatcttgggcacccgtgccctgcagatc
agcatgaatgccccagtgatggttgagttggagggcgagaccgatccgctggagattgca
atgaaagagcttcgggagcgcaagataccatttacgatccgtcgctatttaccagatgga
agttatgaggactggggggttgatgagctgattgtagaagactcttggaagaggcaagtt
ggtggtgactga

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