Magnolia sinica: 131242845
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Entry
131242845 CDS
T09699
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
msin
Magnolia sinica
Pathway
msin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131242845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msin03021
]
131242845
Enzymes [BR:
msin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131242845
Transcription machinery [BR:
msin03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
131242845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
131242845
NCBI-ProteinID:
XP_058097742
LinkDB
All DBs
Position
4:25855518..25925608
Genome browser
AA seq
1174 aa
AA seq
DB search
MGDGTDFEALRELFKPHIDSFDYFIDEGLEKIIMNIQPVKIYNPSEDCTLRIWFEKPELG
FPQWDGGRKKSVKRTKILPFECRQGGLTYRGKFFTNVCLQWNEKSAMGPVIRERFSFGHI
PIMLKSKLCHLRNADPQELVLHKEEMTEMGGYFICNGMERLFRLLIMPKRNYPMAFVRNA
YRKRGDGYTDKAVVIRCVREDQSAVTVKLFYLQNGSARVGFLMRGKEYLLPVGIVLKALI
DTNDHEIYVSLTCFYSEKHQREKGAVGSQLAGERAKIILDEVRNLSLLTRLQCLQYIGEY
FKPAMDGLKTESHSVVGEAVLRNYVLVHLGSNHDKFNLLIFMLQRLFSLVDQTSVPDNSD
ALQFQEVLQPGHLISIYLKEKLEDWLHKARQQIEDKIQNSEETFEFKSTAQIKKVMDKSP
ASNVGKAIESMIKNGRLATMSGLDLQQRESMTILAEKLNFLRFLSHFRSVHRGAFFTGMR
TTDVRKLLPEAWGFLCPVHTPDGEPCGLLNHLTSSCRITSYFDSQGNVKDFLKIRMRILN
ALVGMGMTPLVPKLEEAAPPDVLYVLLDGCVIGSIISSLVENAIAHFRRLKINPSSGIPD
DLEVGYVPFTMGGAYPGLYLFTSPSRFVRPVRNISQPSGENMDIELIGPFEQAYMEIRCP
DGGDGGRKGPFSATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAI
QFRADHKLYHLQTPQSPIVRTASYEKYSMDEYPTGTNAIVAVLAYSGYDMEDAMILNKSS
VDRGLCHGHIYQVETFDLADQRTKSDPGFKVFARSNTDRSQNSLIDSDGLPYVGQVIHPN
EPYCSFHNTVNNTTKTMTLKGSESAVIDYVSIDGASSKNCLQKVNIRMRRRRDPIIGDKF
SSRHGQKGVCSQLWPDIDMPFSASTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGCLHG
KFIDATPFPKSVKKADGESSTESDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELPCEI
FIGPVYYQRLRHMVSDKYQVRSTGTVDQLTRQPIKGRKRGGGIRFGEMERDSVLAHGAAY
LLHDRLHTCSDYHIADVCSLCGSVLTASVIQQQKRATPAIGGLPPGRAPKKVMCQACKTS
KGMETVAMPYVFRYLAAELAAMNVKVTLRLSTGE
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgggagacggaacggacttcgaagccctgcgggagctcttcaaacctcacatcgactct
ttcgattacttcatagacgaaggtctcgagaagataatcatgaacatccaacccgtcaaa
atctacaacccttccgaagattgcacccttcgaatttggttcgagaagccggaattaggc
tttccacaatgggacggcggtcggaagaaatcagtgaaaagaacaaaaattcttcctttc
gagtgtaggcaaggtggacttacatatcgaggtaaattttttaccaatgtatgccttcag
tggaatgagaagtcggcaatggggccggtaattcgagagcggttcagtttcgggcatatt
ccaataatgttaaagtcaaaactctgccacttgcgaaatgctgatcctcaagaactggtt
ctccacaaagaggagatgactgaaatgggtggttacttcatttgcaatgggatggaacga
ctttttcgattgttgatcatgccaaagcgaaactatccaatggcttttgtgcgaaatgcg
tatcgtaaacgaggagatggatatactgataaagcagttgttatcagatgtgttagagaa
gatcaatctgctgtcacagttaagctgttttaccttcagaatggcagtgcaagagttgga
tttttgatgagagggaaggagtacctacttcctgtgggcattgttctgaaggcccttatt
gacactaatgaccatgaaatttatgtgagtttgacatgtttctatagtgagaaacatcag
agggaaaaaggtgccgttggtagtcagcttgcaggtgaaagggcgaaaataattcttgac
gaagtcaggaacttgtctctcctaactcgccttcaatgtctacagtatattggagagtac
ttcaaacctgcaatggatggactgaaaacagaaagccattctgttgttggagaagctgtt
ctaagaaactatgtacttgtgcatcttgggagcaaccatgacaaattcaatttgctaatt
tttatgctgcagaggcttttttcgcttgtcgatcaaacgtctgtaccagataattcggat
gcactgcaatttcaagaggttctgcagcctggacacttaattagtatctatctgaaggag
aaactagaagactggttacacaaagcaaggcagcaaattgaggacaagatacaaaacagc
gaggagacattcgaatttaagagcactgcccaaataaagaaggttatggataaaagtcct
gcatcaaatgttggtaaagctattgagagtatgataaagaatggaaggttagctacaatg
tcaggtcttgatttgcaacagagagagtccatgaccattctagcagagaagctcaacttt
ctccgctttctctcacattttcgatctgttcatagaggtgcttttttcacgggaatgcgc
accactgacgttcggaagttgctaccagaagcttggggttttctttgccctgtccacaca
cctgatggggaaccatgtggtttgttgaatcatctgacatctagttgtcgaatcacatca
tactttgactcgcaaggaaatgtcaaagattttctcaaaatccgcatgcgcattttgaat
gctcttgttggaatgggaatgacacctctggtgccaaagcttgaggaagctgctccccct
gatgttctctatgttcttttagatggatgtgttattggctctataatttctagtttggtc
gagaatgccattgcacattttcgaagattgaagattaatccatcttccgggattcctgat
gatttggaggtggggtatgtaccttttaccatgggaggagcttatcctggcttgtacctt
ttcacatcaccttcaagatttgttcgtccagttaggaatatttcccagccttcaggggaa
aatatggatattgaacttattggacctttcgaacaggcgtatatggagataagatgtccg
gatgggggagatggggggaggaaaggtcctttttctgccactcatgaagagatccacccg
accgcaatactcagtgtggttgccaatctcacgccttggtctgatcacaatcaaagccct
cgtaatatgtatcaatgccagatggctaaacaaacaatggctttctcatcccaagctata
caatttcgtgcagatcacaagctataccatcttcagactcctcaatcccccattgtacgt
acagcttcatatgaaaaatatagcatggatgagtaccccacaggaacgaatgcaatcgtt
gcagttttggcatactcaggttacgatatggaggatgctatgatcttgaacaagtcatca
gttgatcgtgggctgtgtcatggtcatatataccaggttgaaacttttgacttagcggat
cagcgtaccaaatcagatcctggtttcaaagtgtttgctagaagtaacacagatagatct
cagaattctttgattgattctgatggtctcccatatgttgggcaggtaatacacccaaat
gaaccatattgcagttttcataatacggtaaacaatacaacaaaaactatgacactaaag
ggttcagaatctgctgtgatcgactatgtttctattgatggggcaagttccaaaaattgc
ttgcagaaggtgaatatccgaatgcgacgtcgtagagatcctatcattggtgacaagttt
agcagcagacacgggcagaaaggtgtctgctctcagctttggcctgatattgatatgcca
ttttcagcaagtacaggaatgcgaccagatctcattatcaatccacacgcatttccttct
aggatgacaattggaatgctcttggaatctatagcagctaagggaggctgcctacatgga
aaattcattgatgcaactccatttccaaagtcagttaagaaagcagatggagagtcctct
accgaatcagattcgcttgttgatgaacttggccctatgttgacctcctatgggttcaat
tatcatggattggaagtcatgtacagtggtgtcctcgggacagagcttccatgtgaaata
tttattgggcctgtctattaccagcgtctccgacacatggtttctgacaagtatcaggtt
cggtccacaggaaccgtcgatcagctcaccaggcagccaatcaaaggaagaaagcgtgga
ggaggtattcgttttggggagatggagcgcgactcagttctcgcacatggggccgcatac
ctgttacacgataggctccacacatgttccgattatcatatcgctgatgtctgctccctc
tgcgggagtgtcctcacggcatctgtcatccaacagcagaaaagagccacaccagcaatc
ggtgggctgccccctgggagagctccgaagaaggtcatgtgccaagcctgcaaaacgagc
aaagggatggagacggtggccatgccgtatgtcttcaggtacttggccgcagaattagcg
gcgatgaacgtgaaagtgacccttcggttgagtaccggagagtga
DBGET
integrated database retrieval system
