Magnolia sinica: 131243331
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Entry
131243331 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131243331 isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
msin
Magnolia sinica
Pathway
msin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131243331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msin03400
]
131243331
Enzymes [BR:
msin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
131243331
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
131243331
FA (Fanconi anemia) pathway
Downstream FA components
131243331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
T2SSE
RT_RNaseH_2
Motif
Other DBs
NCBI-GeneID:
131243331
NCBI-ProteinID:
XP_058098588
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Position
4:complement(87359585..87490018)
Genome browser
AA seq
1298 aa
AA seq
DB search
MESANSTKEMEPENQKKNANVYQIGGLPVKFPYKPYGSQLAFMGRVISTLDRAQRQGHCH
ALLESPTGTGKSLSLLCSALAWQQNHRSKNQHSNLSHPTPTPGPTPDPYLSGGGFVPEPD
PSGNIEQSLPTTNNRIQRKRTTPTIYYASRTHSQISQVIREYRKTSYRVQMAVLASRKHY
CTNKHVCMKENVDEECKLLLKDPNVGCHEFKNVHKLKAHPLLQKDGCLEAHDIEDLVKLG
QAVKGCSYFAARSMATEAQLVFCPYTYIINPIIRRAMEVDIKGAIVILDEAHNIEDMARD
AGSLDVEEEVLDILQTELGQLCLVDSVAMIYQPLYDVIQGIISWIGQRKDNLEKHGFERY
SSCWTGDKALKELQKAGISQQCFPVLQECATKAVKAASEAELDGVHLSGKSAATVEGLFS
SFSYFFSSNGHHALDYQLALQRYAKRDSGRAASGWTHCLSLWCLNPAVVFKEIADISLSV
ILTSGTLSPMNSFASELGVQFEACMEAPHVIDVESQLWAAVISTGPGNCQLNASYKTADG
YAFQDALGVSLEEICKIVPGGALVFFPSYKLLEKLRTRWVQTGQWSRLNAQKSLFVEPRG
NQEDFEPVLKGYYDSIRGKGKSLGQGAAPWKLKRNHKRDSKNLSNNELPVNFVNGAAFLA
VCRGKVSEGIDFSDENARVVVIVGIPFPNKSDIQVVLKKRYNDTYKSSKNLLSGSEWYCH
QAFRALNQAAGRCIRHRFDYGAIILIDERYKEERNIAFISKWLRKSIKQYESFDKSMEGL
KAFFLDAKERFGQKSMNFGDGGLENSDINKDNMASLKKDISSKRTPRKRNQKINKHDNQN
GRKAASDMKMPTAKTGQLTEILTFERNDDASLSHPRTQENSRAKVSIHTDEKDLSSCGKC
INSRYSQKNSRWSETVSLSSSNSSPDQCAMTDNPTVGNNLVSPGVIPKDENSYSSMLRVS
SPFSDRLSFHSATITNSSAVLSEGACTSLVTPERKVIGDFFNPEQESFLNSSVNSHSQKR
RKPSQIRQLGSPFTEYSHIDRIRTMNISSCTDQKSELGSEANCPKCRNQLDVLRLTNGNS
SALSTSSDLVINNKLHICCSACRKPLGLPENNFLLSCSSTSSSKTYLASLRSAESLSRSE
PCSIQVLISDVSSVDQSLCNRSTINGTPQHGIWCEEDGCVFRTVCCPFCTIPETCLGLQV
LATDASNVHLLNKVIFYADCLEIKNHEEESKEEVPLPVSGSGSGPVSGLSLIEKFSYVPR
SNSSGWVTTKSKLRLPKRGLVCHSNDLDEAHMQAEADM
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgcgaattcgacgaaagagatggaacctgagaatcaaaagaagaatgccaac
gtctaccagatcggcggactccccgtcaaattcccatacaaaccctacggctcgcagctt
gcattcatgggccgagtcatttccaccctcgaccgcgcccaacggcagggccactgtcac
gccctcctcgaatccccaacgggaactgggaaatccctttccctcctctgctccgccctc
gcctggcagcagaatcaccgatccaagaatcagcattccaatctctctcacccgacaccg
actccagggcccactcccgatccttacctatccggcggtggatttgttcctgaacctgat
ccctcaggaaatatagagcagtctctacctacgacaaacaacagaatccagaggaagcgc
acaacacccaccatttattatgcctcgcggacacattctcaaataagtcaagttattcgt
gaataccgtaaaacatcttatcgagttcagatggcagttttggcatcgcgtaaacactat
tgcaccaacaagcatgtttgcatgaaagagaatgtcgatgaggagtgtaagttgctctta
aaggacccaaatgtgggatgtcacgaattcaaaaatgtgcataaactcaaagctcatcct
ttgcttcagaaagacggctgcctcgaggctcatgatattgaagatcttgtgaaacttggc
caggccgtaaaaggttgttcatattttgcagcacggtctatggcaacagaagctcagcta
gtattctgcccatacacttacatcattaatccaatcattcggagggcaatggaagtagat
ataaaaggagctattgtgattcttgatgaagcccacaatatagaggacatggcacgcgat
gctggcagtctagatgtcgaagaagaagtcctagacatattgcagacagaactagggcaa
ctgtgcttggttgatagtgttgcaatgatttaccaacctttatatgacgtgatacaagga
atcataagttggattggccagaggaaagataacttggagaagcatggatttgaacgctac
tcgtcgtgttggactggggataaagctttgaaagaacttcaaaaggccggtatttctcag
cagtgctttcccgtcttgcaggaatgtgccactaaggcggtcaaagctgcttcagaggca
gagttggatggagtgcatttaagtggcaaatcagcggcaacggtggaaggcttattttct
tcatttagttactttttctcttcaaatggccatcatgcacttgattatcaacttgctctg
cagcgatatgctaaaagagattccggacgtgctgctagtggctggacacattgcttgagt
ctttggtgtctaaatcctgccgttgtcttcaaagaaattgcagatatttccctatcagta
atcctaacatctgggacactctcgccaatgaactcatttgcttctgaacttggcgttcag
tttgaagcatgcatggaagcgccacatgttatagatgtggaatcacagctttgggctgct
gttatctctactggtccagggaattgtcagttgaatgccagttataaaacagctgatggg
tatgcttttcaggatgcgcttggggtttctttagaggaaatttgcaagattgtgccaggt
ggtgctcttgttttctttcctagctacaagttgctggaaaagctacgcactcgttgggtt
caaacaggtcaatggtctagattaaatgcacaaaaatccctttttgttgagccaagagga
aaccaggaggattttgagcctgttttgaagggttattatgattcaattcgtggaaagggt
aaatctctgggccaaggagctgctccttggaaactcaaaaggaatcataagcgagactct
aaaaacctgagtaacaacgagctcccagtaaattttgtaaatggagctgcttttcttgca
gtttgccgaggaaaggtatcagaagggattgatttttctgatgaaaatgctcgtgtggtt
gtaattgttggcattccatttccgaacaaaagtgacattcaagtagtgctgaagaagaga
tacaatgacacgtataaatcatccaaaaatcttctaagtgggagtgagtggtactgccac
caagcattccgtgctctgaaccaggctgcaggtcgttgcatacgacatcgatttgactat
ggggccatcattttaatagatgagcggtataaggaggagcgaaacatagcattcatttca
aagtggctaaggaaatccatcaaacagtatgagagctttgacaagtcgatggagggacta
aaagccttttttcttgatgccaaggaacggtttggccaaaaaagtatgaacttcggagat
ggtggattagaaaactctgacatcaacaaggacaatatggcttctttgaagaaagatatc
tcaagtaagaggactccaagaaagagaaatcagaaaatcaacaagcatgacaatcagaat
ggaaggaaagcagcttctgacatgaagatgccaactgcaaaaactggccaattaaccgaa
attttaacatttgaaagaaatgatgatgcctctctttctcatccgagaactcaagaaaac
agtcgggctaaggtatctattcacacagatgaaaaggatttgagtagctgtggaaaatgt
atcaactcgcggtacagccaaaagaactccaggtggtcagagacagtatccttatcatcc
tctaatagcagtccagaccaatgtgcaatgacagacaaccccactgtaggcaacaatctt
gttagtcctggagttattcccaaggatgagaactcatactcatccatgcttcgagtctct
agtccattttcagaccggttatccttccattcagctaccataacaaattcaagtgcagtt
ctttccgaaggtgcatgcacttcgttggttacacctgaaaggaaagtaatcggggacttc
ttcaacccggaacaagaatcatttcttaactcaagtgtgaattctcatagccagaaaaga
agaaagccaagccaaatccgtcaattaggttctccattcacagaatattcccatatagat
cgtatcagaaccatgaacatatctagttgcacagatcaaaagagtgaattgggttctgag
gcaaattgtccaaaatgcagaaatcagctggatgttctgagattaactaatggaaacagc
agtgcgttatctacatcatctgatcttgttatcaacaataaacttcacatatgttgctct
gcctgcagaaagccattgggtttacctgagaacaatttccttcttagttgttcatcaact
tcatcttcgaaaacttatttggcgtctctccgatcagcagaatctctgtccaggagtgaa
ccatgtagcatacaagttctaatatcagatgtttcatctgtcgatcagagtctgtgtaac
aggtctacaatcaatggtactccacagcatggtatctggtgtgaagaagatgggtgtgta
ttcaggactgtttgctgcccgttctgcaccatccctgagacatgtcttgggcttcaggtc
ttggcaactgatgcatccaatgtccatttactaaacaaggtcatcttttatgctgattgc
ttggaaatcaagaatcatgaagaagaatcgaaagaagaggttcctttgcccgttagtggc
tcaggctccggccccgtctcaggtttgagtttgattgagaaattctcatatgtgccacgg
agtaattctagtggctgggtcacaacaaaatctaagctaaggctacccaagagaggtctc
gtttgtcattcaaatgatctagatgaggcccatatgcaagctgaggcagatatgtga
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