Methanosarcina siciliae C2J: MSSAC_4357
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Entry
MSSAC_4357 CDS
T03863
Name
(GenBank) Archaeal DNA polymerase II small subunit
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
msj
Methanosarcina siciliae C2J
Pathway
msj03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
msj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSSAC_4357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msj03032
]
MSSAC_4357
Enzymes [BR:
msj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSSAC_4357
DNA replication proteins [BR:
msj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
MSSAC_4357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AKB38947
UniProt:
A0A0E3PUZ3
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Position
5365342..5367312
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AA seq
656 aa
AA seq
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MNEIDIIRAVIEEGYQISPQAVELIKLSNSPENLLKYILSTIDDCVFVIEPEHVDLKSFE
ASTTFSRVTSGAPPGTVSGKVSGKISTPALDSASEPVSDSGYESSSEPSVEPDIVSAVEV
PDSNPEIEPEILSSQGSNSDFDSDPVYDSASDLVHDLAKDPIHDSVSAPVNNSVHDSVHG
SFSNPVSPSVSPKSIEKQASSFFGITGPSSTSKNALKANFLFSNQRNSLSSSSRDEGVRY
IPGRNPVTVLSDITGHSTCVGEYMQFVQYFRDRYSRLSEILRGRMNARPIESLKRRSFRR
GSDGNTEELSIIGMVSDISTTTNGHKILSLEDSTGSFSVLIRNSDKELFELASRLLLDEV
VGVTGSVTNDGNLMLATKLLQPDVPNSVQRRTGSHGKAVLISDVHVGSSQFLEDSWLDFL
DFLKGESDSEEMREIAAQIRYLVVAGDLVDGIGIYPDQEMELDIPDVYEQYRKAAEYIRE
VPEHIHVIISPGNHDAVRQAEPQPALPARICADFPENVTFVGNPALVDLDGVQILIYHGR
SIDDLVASVPGVSYQEPAGAVLEMLKRRHLAPTYGSRVSISPEKKDYFIIDPVPDIIHTG
HVHTLGVQRYKNVLLVNSGTWQGQTEFQKRVNLMPMPARVPVVDLADFDVKILAFD
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatcgatattataagggcagttatagaggaagggtaccagataagcccgcaa
gccgtagaactaatcaaattaagtaactcccctgaaaaccttctaaaatacattctttca
actattgatgactgtgttttcgttatcgaacccgaacatgtcgacctgaagagctttgaa
gcttctacaactttttccagagtgacctctggagcacctcccgggacagtttccggtaag
gtttcaggtaaaatttccactcctgccttagattctgcttcagaacctgtctcagattct
ggctacgaatcttcctcagaaccttccgttgaaccggatatagtttcagcagttgaagtc
ccggactccaacccggaaattgaacctgaaattctttcttcccagggttcgaattcagat
tttgattctgatccggtttacgattctgcttctgatttagttcatgatttagctaaggat
ccaattcatgattctgtttctgccccggttaataattcagttcatgattcagttcatggt
tctttttccaatcctgttagtccttctgtttctccaaaaagtatagaaaaacaggcttcc
tcttttttcggaattacaggcccttcttctacctctaaaaatgctttaaaggctaatttt
cttttttcaaaccagagaaattctctttcttcgagttccagggacgaaggggtccgatat
attccgggccgcaaccctgttactgtgctttccgacattacagggcattcgacctgtgtt
ggagagtatatgcagtttgtgcagtatttcagggacaggtacagcaggctctctgagatc
ctccggggcagaatgaatgcccggcctatagagagtctgaaaaggaggagtttccgccga
gggtccgacgggaacactgaggagttatcgatcatagggatggtttcagatatcagcacc
accaccaatgggcataagatcctttctcttgaagactcaacaggctctttttccgtgctt
atccgaaatagtgataaagagctctttgagctagcttcgcggctccttctggacgaggtt
gtcggggtaacaggctcggttacgaacgacggaaaccttatgcttgccacaaaactcctc
cagcccgatgtccctaacagtgttcagcgcaggacaggaagccacggaaaagccgtcctg
atctcggatgtgcatgtgggcagttcccagttcctggaagattcctggctggacttcctg
gactttttgaaaggagaatccgactccgaagaaatgcgggagattgcagcccagatccgt
tatctcgttgttgcaggcgacctggtggacggcatagggatttatcctgaccaggaaatg
gaactggatatcccggatgtctatgaacagtacaggaaagccgcagagtatataagagaa
gttcctgaacacatccatgtgatcataagtcccggaaaccatgacgctgtacgccaggca
gaaccacagcccgccctgcctgcgcgaatctgtgcggattttcctgagaacgtcaccttc
gtaggcaaccctgctcttgtggaccttgacggcgtccagattcttatatatcacggcagg
tcgattgatgatctggtggcgagtgttcccggggtatcatatcaggaacctgcaggggca
gtccttgagatgctcaagcgcaggcaccttgctccgacttacgggagtagggtttccata
tccccggagaaaaaagactactttataattgaccctgttccggatatcatccatacgggg
cacgtccatactctgggggtccagcgatacaaaaatgtcctgctggtcaactccggaaca
tggcagggtcagaccgagttccagaagcgtgtaaacctgatgcctatgccagctcgagtt
cccgttgtggatcttgcagattttgacgtgaaaatcctggcatttgattaa
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