Methanosarcina siciliae T4/M: MSSIT_2787
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Entry
MSSIT_2787 CDS
T03865
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
msw
Methanosarcina siciliae T4/M
Pathway
msw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSSIT_2787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msw03021
]
MSSIT_2787
Enzymes [BR:
msw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSSIT_2787
Transcription machinery [BR:
msw03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSSIT_2787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Fer4_7
Fer4
Fer4_9
Fer4_16
Fer4_10
Fer4_21
Fer4_6
DUF4879
Fer4_8
Motif
Other DBs
NCBI-ProteinID:
AKB29506
UniProt:
A0A0E3L920
LinkDB
All DBs
Position
3539452..3540252
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AA seq
266 aa
AA seq
DB search
MTMEVDILELSDRSAKFVLSKVSTAFANGIRRAMVADVPTLAIEYVNLYDNTSVLYDEQL
ALRLSLIPLVTDIETYVPQAECDVCGGEGCPACEVSLTLSAEGPVTVYSRDLISSDPKIQ
PADPNVPIVELKKGQKLVLEAVAHMGYGKDSVKWQAGVACGYKNMPVITIENCDACGHCA
AECPQGIISVGEAGAKIAEEDVMKCSICRLCEQVCDINAIKVDFYENSFVFTMESDGSYT
AKDLALNAANVVKDKAGELLAILDQL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggaagtagacattctggagttatcggacagatctgcaaagtttgtgctgtca
aaggtaagcacggcttttgccaacggcatccggcgtgctatggtcgccgatgtacccact
cttgcaatcgaatatgtaaacctttacgacaacacctccgtactctatgatgaacagctg
gctctccgtctttccttaatcccgcttgtaacggatatagagacgtatgtgcctcaggct
gagtgcgatgtctgcggaggcgaaggctgccctgcctgcgaggtctccctgaccctcagt
gcagaaggtcccgtaaccgtttattctcgggaccttatctcttctgaccccaagatccag
ccggcagatccgaatgttccgattgttgagctaaaaaaagggcagaagcttgtactcgag
gctgtcgcccacatgggctacggtaaagacagtgttaagtggcaggccggtgttgcatgc
ggctacaaaaacatgcctgtaattaccattgaaaactgcgatgcctgcggacactgtgca
gcagaatgtccgcaggggattatcagtgttggagaggccggagctaagattgccgaggaa
gacgtcatgaagtgttccatctgcaggctctgtgagcaggtatgtgacattaacgcgatc
aaagtggacttctacgaaaactcttttgtttttaccatggagtctgatggttcatatact
gctaaagaccttgccctcaacgccgcaaatgtggtaaaggacaaagccggagagctgctg
gcaattctggaccagctctga
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