Malus sylvestris (European crab apple): 126585612
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Entry
126585612 CDS
T09027
Name
(RefSeq) solanesyl diphosphate synthase 3, chloroplastic/mitochondrial-like
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00900
Terpenoid backbone biosynthesis
msyl01100
Metabolic pathways
msyl01110
Biosynthesis of secondary metabolites
Module
msyl_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
126585612
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msyl01006
]
126585612
Enzymes [BR:
msyl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
126585612
Prenyltransferases [BR:
msyl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
126585612
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Ta1207
Motif
Other DBs
NCBI-GeneID:
126585612
NCBI-ProteinID:
XP_050106026
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All DBs
Position
10:complement(36656805..36664136)
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AA seq
422 aa
AA seq
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MLFSRGFSRIQRSSFNGLCRCFLSHRRDPQFVAASAYSQSLSDSTQKIMGCREFFSWGLP
PVFHVSKHQIHQQSSSMVEEPLDPFSLVSDELSIIANRLRAMVVAEVPKLASAAEYFFKM
GVEGKRFRPTVLLLMSTALNITVPEPPTQLREALSTELRARQQCIAEVTEMIHVASLLHD
DVLDDADTRRGVGSLNCVMGNKLAVLAGDFLLSRACVALASLRNTEVVSLLSTVVEHLVT
GETMQMTTTSDQRCSMEFYIQKTYFKTASLISNSCKAIAVLAGHTTEVATLAYEYGKNLG
LAFQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAMEEFPQLRTVVEQGLDNNPAN
IELALDYLGRSRGIHRTRELATKHANLAAAAIESLPESEDENVRKSRRALLDLTHIVITR
TK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgttattttcgcggggattttctcggattcaaagaagcagcttcaatgggttgtgtcgg
tgttttctttcccatcgccgggacccgcagttcgttgccgccagcgcttactctcagtcg
ctgagtgattcgacccagaagattatgggttgcagagagttcttttcgtggggcttgccg
ccggttttccatgtttcgaagcaccaaattcaccagcaaagcagctccatggttgaggaa
ccacttgacccattctcacttgtttccgatgaactgtcaattattgcgaacaggttgcgg
gcaatggtagttgctgaggtccctaagcttgcctccgctgccgaatacttctttaaaatg
ggggtagaaggaaagaggtttcgtcccacggtcttattgctgatgtcaactgctttgaat
atcactgtacctgaacctcctacgcagttgcgagaggctttgtcaacagagctacgcgca
agacaacaatgtatagcagaagttacagagatgattcatgtggcaagtcttctacatgat
gatgtattggatgatgcagacacaaggcgtggtgttggttcattaaattgtgtaatggga
aataagttagctgttttagcaggggattttctgctttcccgagcttgtgttgcacttgcg
tctttgagaaacacagaggttgtatcattactgtcaacagttgttgagcatcttgtgaca
ggtgaaaccatgcaaatgactaccacatctgatcaacgttgtagcatggaattttatata
caaaagacatatttcaagactgcatcactgatttcaaatagttgtaaggcaattgccgtt
cttgctgggcatacaactgaagttgctacgttggcttatgagtatggaaaaaatctggga
ttggcatttcaattaatagatgacgttcttgattttacgggcacatcagcttcacttgga
aagggctctttatctgacatccgccatggcatcgtaactgctccaatattgtttgccatg
gaagagtttcctcagttgcgtacagttgttgaacagggccttgacaacaaccctgcaaat
attgaactcgctcttgactatctaggtaggagccgcggaatacacaggacaagggagcta
gccacaaaacacgcaaaccttgccgcagcagcaatcgaatctctgcccgagagcgaagac
gagaatgtcagaaaatcgaggagggcactcctagatctcacccacatagtcattacaaga
accaagtga
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