Malus sylvestris (European crab apple): 126586351
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Entry
126586351 CDS
T09027
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126586351
Enzymes [BR:
msyl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
126586351
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
126586351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TYW3
Met_10
Kelch_4
Kelch_3
Kelch_1
Kelch_6
Kelch_2
Kelch_5
MTS
Cons_hypoth95
DNA_methylase
TRM
PrmA
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
126586351
NCBI-ProteinID:
XP_050107134
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All DBs
Position
10:complement(41867295..41872019)
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AA seq
1027 aa
AA seq
DB search
MEFEKRKAATLASLRSEETDKSPKGTVDAPIIPLLDAINSHPNYFTTSSCSGRISILSQP
THVTNQPKTKKKALGGTWIFISHDPADADSILGLLFGPDPNDQNDAQDQNDLVFRFEPLI
VAVECRDVASAQSLVSKAIACGFRESGITNSNRRVIIAIRCSIRMEVPLGSSREVMVSRE
YVRFLVRVANEKMEANRKRTEAFFQALQSEDGGFVGPTVANGEIAADGHSDSGSKEVPGG
CSLSVVEMEIAGEPEENLFLWGHSSCALEIKNRNGVLVFGGFGGMGRHGRRSSSWLVDTL
SGTLRAIDADGTPSPRLGHTTSLVGDCVFVIGGRADPEKILSDVWVLNTAKNEWKLLECS
GDKFPPRHRHAAAVIGSKIYVFGGLNNDTISSSLHVLDTDNLQWKELIVSGEHPCARHSH
SMVAYRSQLYIFGGYSGEKTLADLYVFDIQTCKWKNENAAGRSPHARFSHSMFVYKNYLG
IVGGCPVKQRCQELALLDLKVRVWRHVKLESNGEDLFVRSTANVVGDNLIMIGGGASCYA
FGTKFSKPMKINLLPFMSIDDNIKPDDREMHAQHYEMVNNEKGKQFQDPRAEGVQSLSEP
CDLNFESDLPMENGISQQVESYWILQLERKYAKVGKDILKKFGWLDLGRKVYSRKSGSHI
CFPVNEKFSGVFKENKRPLTDLSEGQSDHFVKPVIGEEFSVNEVNCSKALDILKECGATK
LAAEEVEVKRAAKSPAKVMNEIVGLLIKEKGLPAELLEELPARWERLGDIVVLPAASFKN
PIWDSLGMELWHVISKSLNAHRLARQGRVASTATRDSTLEILVGDNGWVEHRENGILYSF
DATKCMFSWGNLSEKLRMASMNCRNEIVVDLFAGIGYFVLPFLVRANAKLVYACEWNPHA
VEALQRNVQANSVSDRCIVLEGDNRIVAPKGVADRVCLGLIPTSEGSWVTAVRALRSEGG
MLHVHGNVKDSEENSWTKHVSESISEIAKSEGLCWEVRVEHVERVKWYAPHIRHLVADVR
CRQMIRT
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgagaaacgaaaggcggcgacgctagcgtcattgcggtcggaagagacagac
aaatcaccgaagggcacggtggacgccccaatcataccccttctcgacgccatcaacagc
caccccaattatttcaccaccagctcctgctccggccgtatctctatcctctcccagccc
acgcacgtgacaaatcagcccaagaccaagaagaaagctctaggtggcacgtggatcttc
atctcccacgacccggcggatgccgactctatcctcggcctcctcttcggccccgacccg
aatgatcagaacgacgcacaggaccaaaacgacctcgttttcagattcgagccgcttatt
gtggcggtggagtgcagggacgtggcgtcggcgcagtcgttggtttcgaaggcgattgct
tgcgggttcagagagtccggcattacgaattcgaaccggcgcgtgattatcgccattcgg
tgttcaattcggatggaggtgccgctggggagcagccgggaggtgatggtgtcgagagag
tacgtgaggttccttgtcagggtggcgaacgagaaaatggaggccaacaggaagaggact
gaggcatttttccaggctctgcagagtgaagatggagggtttgtgggtcccacggttgcg
aatggcgagattgcggcagatgggcattcggattctgggtccaaggaagttcctggtggt
tgtagtctgtctgttgttgagatggaaatagccggtgaacccgaagagaatcttttcctc
tggggtcattcgtcttgtgcattggaaatcaaaaaccggaatggtgttcttgtgtttggt
ggctttggaggcatgggaagacatgggagaagaagtagttcttggctggttgatacattg
tctggcactttgagagcaattgatgcagacggcactccgtctccgcggttgggtcacact
acgtctctggttggagattgtgtgtttgtcattggaggcagggctgatcctgagaaaatt
ttgagtgatgtttgggtcctcaatacagcaaagaatgaatggaagttattggaatgttct
ggggacaaatttcctcccaggcatcggcatgctgcagctgttataggctcaaagatatat
gtgtttggtggacttaacaatgataccatcagttcttccttacatgttctcgataccgat
aatctgcagtggaaagagttgattgtcagtggtgagcatccatgtgccagacattctcac
tcaatggtggcatatagatctcaactatatatttttggaggatatagtggtgagaaaaca
cttgcagacttgtatgtttttgatatccaaacatgtaaatggaagaatgaaaatgcagct
gggagaagtccacatgcaaggttctcccactcaatgtttgtctacaagaattatcttggg
attgttggtggttgtccagttaaacaacgttgccaggagttagcactacttgatttgaag
gtccgtgtgtggaggcatgtgaaacttgaatccaatggtgaagatttatttgtacgtagc
acagccaatgttgtcggcgacaatcttattatgattggtggtggggcatcttgttatgca
tttgggacaaagtttagtaagcccatgaaaatcaacttgcttccttttatgagcatagat
gataatattaagccagatgacagagaaatgcatgctcaacattatgaaatggtgaataat
gagaaaggtaaacaattccaagatccacgggctgaaggtgtgcagagcttaagtgaacct
tgtgatctgaattttgagagtgacttgcccatggaaaatggcataagtcagcaggtagag
tcatattggattctacaacttgaaagaaaatatgcaaaagtaggcaaggacatattgaag
aagtttggatggttagatcttggaaggaaggtgtactccaggaagagtggttcacatata
tgttttcctgtgaacgaaaaattttcaggtgtgtttaaagaaaacaagcgtcctttgaca
gatttatctgaaggacagagtgatcactttgttaaaccagttataggagaagaattctcg
gttaatgaggtgaactgttcaaaagccttggacattctaaaggaatgtggtgctactaag
ctggcagctgaagaagttgaagtcaagagagctgccaaatctcccgcgaaagtaatgaat
gaaattgtgggcttgctgataaaggagaaaggactgcctgcagaactcttagaggagcta
ccagcaagatgggagcgacttggagatatagttgtccttccggcggcatcgttcaagaat
ccaatatgggactcattagggatggagctttggcatgttatttccaaatcacttaacgct
catcgccttgcacgccaaggccgagttgcatcgaccgctacaagggacagtactttggag
attcttgtaggagataatggatgggttgagcatcgcgaaaatggcattctctattctttc
gatgctactaaatgtatgttctcctggggcaacctatctgagaagctccgcatggcgtca
atgaattgcagaaatgagattgttgtggatttgtttgctggaattggatattttgttctg
ccatttcttgtcagggccaacgcaaaactagtttatgcttgtgaatggaatccccatgct
gttgaggcactccagcgaaatgtgcaagccaattcagttagtgaccgatgcattgttctt
gaaggagataaccggatagtggcacctaaaggagtggctgatcgggtctgtctcggtctc
attccaacaagtgaaggtagctgggtcactgctgttagggcattaaggagcgagggcggg
atgctacacgtgcacgggaacgtcaaggactcggaggagaattcatggactaaacatgta
tcagaatcaataagtgaaattgccaaatctgaaggtctttgttgggaagtaagagtagaa
catgtcgagagagtgaaatggtatgccccacacatccgtcatcttgttgcagacgttaga
tgtcgacagatgatccgaacatga
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