Malus sylvestris (European crab apple): 126586637
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Entry
126586637 CDS
T09027
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03020
RNA polymerase
msyl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126586637
09124 Replication and repair
03420 Nucleotide excision repair
126586637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126586637
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126586637
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
126586637
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
126586637
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Pro_Al_protease
Motif
Other DBs
NCBI-GeneID:
126586637
NCBI-ProteinID:
XP_050107506
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All DBs
Position
10:complement(17181486..17184758)
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AA seq
318 aa
AA seq
DB search
MEGKSYQRLPRVKIREMRDDYLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSS
VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV
TSKDLLSSDHTVVPVDFSDSSGFESSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKWS
PAATVTFMYEPDIRINEELMDTLTLEEKKAWVESSPTKVFDIDPKTDKVVVVDPEAYTYD
DEVIKKAEAMGKSGLVDISAREDSFIFTVESTGAIKAAQLLLNAIEVLKQKLDAVRLSED
TVEADDQFGELGAHMRGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtaaatcgtaccagagactcccgcgcgtcaaaatccgcgaaatgcgtgacgac
tacttgaagttcgagctccgcgacaccgacgccagcgtcgccaacgcgctccggcgcgtg
atgatcgccgaggtccccactgtcgccatcgatcttgtcgagatcgagatcaactcctcc
gtcctcaacgacgagttcatcgcccaccgactcggtctcatccccctcacctccgaccgg
gccatgagcatgcgcttctcacgtgactgcgacgcctgcgacggtgacggacagtgcgag
ttctgctccgtcgagtttcacctccgcgccaagtgccactccgaccaaaccctagatgtc
accagcaaggacctcctcagctccgaccacaccgtggtccccgttgatttctctgattcc
tccggcttcgaatcctccgaacagaagggaattatcattgtgaagttgcgaagggggcaa
gagctgaggctgagggccattgccagaaaggggattggcaaagatcatgctaagtggtcg
cccgcggccactgtcactttcatgtatgaacccgacattcgaatcaatgaggagctgatg
gatactttgactcttgaggagaagaaggcttgggttgagagtagtcccaccaaggtcttt
gacattgatcctaaaaccgacaaggtcgtggtggttgatcctgaagcatacacctatgat
gatgaagtgatcaagaaagcagaagctatggggaagtctgggcttgtggatatcagtgca
agagaagatagctttatattcacagtggaatctaccggtgcgattaaagctgctcagttg
ctccttaatgctatagaagtcctgaaacagaagctggatgcagtgcgcctttctgaggat
actgtagaagcagatgaccagtttggtgaattaggtgcacatatgcgaggaggatga
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