Malus sylvestris (European crab apple): 126588952
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Entry
126588952 CDS
T09027
Name
(RefSeq) xanthine dehydrogenase 1-like isoform X1
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00230
Purine metabolism
msyl00232
Caffeine metabolism
msyl01100
Metabolic pathways
msyl01110
Biosynthesis of secondary metabolites
msyl01232
Nucleotide metabolism
msyl04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
126588952
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
126588952
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
126588952
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126588952
Enzymes [BR:
msyl01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
126588952
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
126588952
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of breast milk
126588952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
FAD_binding_5
Fer2_2
CO_deh_flav_C
Ald_Xan_dh_C
Fer2
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-GeneID:
126588952
NCBI-ProteinID:
XP_050110071
LinkDB
All DBs
Position
11:26529230..26540854
Genome browser
AA seq
1368 aa
AA seq
DB search
MGSLKKEEEDLEQSGEDSKEAILYVNGVRRVLPDGLAHLTLLEYLRDIGLTGTKLGCGEG
GCGACTVMVSRYDKELKKSFHYAVNACLAPLYSVEGMHVITVEGLGSHKQGLHPIQESLA
RSHGSQCGFCTPGFIMSIYALLRSSQKPPNEEQIEECLAGNLCRCTGYRPIVDAFRVFAK
TNDTPYINTSSLSSEGGEFVCPSTGKPCSCGLKSESSCTTHESGTHGERYAPVSYSEIDG
STYTDKEFIFPPELLLRKSTYLSLTGFGGLKWFRPLRLKQVLGLKEKYPDAKLLVGNTEV
GIEMRLKNIQYKVLIFVTNVPELSKLTVKDDGIEIGSAVRLSELLKVLRTVITERAAHET
SACKAFVEQLKWFAGVQIRNVASVGGNICTASPISDLNPLWMASRAKFQIIDCKGNIRTT
LAENFFLGYRKVDLASGEILLSVFLPWTRSFEYVKEYKQAHRRDDDIAIVNAGIRVHLED
RGGWVVSDASIAYGGVAPLSLSAKRTKFFLIGKSWNQEMLQGALKVLQEDVLLKDDAPGG
MVEFRRSLSVSFFFKFFLWVSHQMEGKQCIKESVPLSHLSAVQSFHRPPVIGSQDYEVIK
RGTAVGSPEVHLSARLQVTGEAEYADDTPLPPNCLHAALILSRKPHARIRSIDDSGVKLS
PGFAGIYLAKNVPADNNIGPVVEDEELFASEFVTCVGQVIGVVVADTHENAKLAVRKVHV
EYEELPTILSIQDAINAKSFHPNTERCFRKGDVDICFRSSQCDHVIEGEVRVGGQEHFYL
EPNSSVVWTVDGGNEVHMISSTQAPQKHQKYISHVLGLPMSKVVCKTKRIGGGFGGKETR
SAFIAAAAAVPAYLLNRPVKITLDRDTDMMITGQRHSFLGKYKVGFTNEGKVLALDLEIY
NNAGNSLDLSLPVLERAMFHSDNVYEIPNVRIVGRVCFTNIPSNTAFRGFGGPQGMIIAE
NWIQRVAAELKKSPEEIKEINFQGEGSILHYGQQLKHCTLGPLWNQLKSSCEFSKARYEV
DQFNIQNRWRKRGIAMVPTKFGIAFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHT
KVAQVAASAFNIPLSSVFISETSTDKVPNASPTAASASSDMYGAAVLDACEKIKARMKPI
ASQQNFSSFAELASACYVERIDLSAHGFYITPEIDFDWTTGKGNPFNYFTYGAAFAEVEI
DTLTGDFHTRAANVFLDLGYSLNPAIDVGQIEGAFVQGLGWVALEELKWGDPAHKWISPG
CLYTSGPGSYKIPSINDVPFKFSISLLKGHPNVKAIHSSKAVGEPPFFLASAVFFAIKDA
IIAARAEVGSNEWFPLDNPATPERIRMGCLDEIIEPFVSTDFRAKLSV
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgttgaagaaggaagaggaggacctggaacaatcgggggaggactcaaaagag
gccatactgtatgtcaatggagttcgtagagttttgcctgacgggttggcccatttgacc
cttctcgagtatctcagagatataggtttgacggggacaaagcttggctgtggtgaaggt
ggttgtggtgcttgcactgttatggtttcgcgttacgacaaagaactgaagaaaagtttc
cactatgctgtcaacgcatgcttggctcctttgtattctgtagaagggatgcatgtaatt
actgtggaaggactagggagccacaagcagggcttgcacccaattcaagaatcattggca
cgatctcatggttcacaatgtggattttgcacccccggttttattatgtccatctatgcc
ttgttaaggtcaagtcagaaaccacctaatgaggagcagattgaagaatgtcttgcagga
aatttgtgtagatgcacaggttacaggccaattgttgatgcttttcgtgtctttgccaaa
acaaatgatacaccatacattaatacatcttcactaagctccgaaggaggtgagtttgtg
tgcccttcgactggaaagccctgttcgtgtggattgaaaagtgaaagttcatgcaccact
catgaaagtggtactcatggtgagaggtatgcacctgtctcgtacagtgaaattgatgga
agcacatacacagacaaggagtttatttttcctcctgagctattgttgagaaaatcgact
tatttgagtttgactggttttggtggattaaagtggttccgaccgttgaggcttaaacaa
gtgctaggattgaaggaaaaataccctgatgcaaaattattggtaggcaatactgaggtg
ggaattgaaatgaggttgaaaaatattcaatataaggttttgattttcgtcacgaatgta
cctgaactaagtaaattgactgtgaaggatgatggcatagagataggttcagcagtaaga
ctttctgaactacttaaagttctaagaacggtcataacagaacgcgcagctcatgaaact
tctgcttgtaaggccttcgttgaacaattaaaatggtttgctggggtgcaaataagaaat
gttgcatctgtgggtggaaatatctgtacagccagtccaatatcagacttgaaccctctt
tggatggcctctagagcaaaatttcagattattgattgcaaagggaatattagaacgaca
ctggcagaaaactttttcttgggttaccgaaaggtggatctggccagtggtgaaatttta
ctctctgtatttttaccttggactaggtccttcgagtatgtgaaagagtataagcaagct
cacagaagggacgatgatattgcaattgtgaatgctgggattcgtgttcatcttgaggac
agaggtggctgggttgtgtctgatgcatccattgcttatggtggagttgctccactctct
ctttctgcaaaaagaacgaaattttttctcattgggaagagttggaaccaggagatgttg
cagggtgccttgaaagtcctgcaagaagatgtattgctcaaggatgatgctcctggtgga
atggtggagtttcgtagatcattgagtgttagctttttcttcaaattttttctttgggtt
tctcatcaaatggaagggaagcaatgcattaaagagagtgtaccattatctcatctttct
gctgtacaatcatttcaccggccacctgttataggatctcaagattatgaagtcataaaa
cgtgggacagctgttgggtctcccgaggttcatttatcagcaagacttcaggttacagga
gaggcggaatatgccgatgacacaccattgcctcctaattgtttacacgctgctttaata
ctcagcagaaagcctcacgctcgtatacgttcaatcgatgattctggagtaaagttatca
cctgggtttgcaggcatatatttagcaaagaacgttccagctgataataacattgggcca
gttgttgaagacgaggaactatttgcttcagaatttgtcacttgtgtaggtcaggttata
ggagtggttgttgctgatacacatgagaatgcaaaactagcagtgaggaaggttcatgtt
gagtatgaagagctaccaaccatcttatcaatacaggatgccatcaatgccaaaagtttc
catcctaatacggagaggtgttttaggaaaggggatgtggatatttgctttcgatcaagt
caatgtgaccatgtaatagagggggaagttcgagtcggtggacaggaacacttctatttg
gagccaaatagcagtgtggtatggacagtggatggtggcaatgaagttcatatgatctca
tccactcaggcccctcagaagcaccagaaatacatttctcatgttcttggtcttccaatg
tcgaaagtcgtttgtaaaactaagcgcattggtggtggttttggcggcaaggagactagg
tcagcttttattgctgctgcagccgctgttccagcatatctgttaaatcgtccagttaaa
attacattagaccgtgatacagatatgatgataactggacaacgccatagctttctcgga
aagtacaaggttggatttacaaatgagggcaaggtgttggcactggatcttgaaatctac
aataatgctggaaattcgctagatttgtctcttcccgtacttgaacgtgctatgtttcac
tcagataacgtctatgagattccaaatgtgaggattgtaggaagggtttgcttcactaac
attccaagtaacactgcttttcgaggatttggtggtcctcaaggtatgattattgcggaa
aattggattcagagggttgctgcagaactcaaaaaaagcccagaagagataaaagaaatt
aattttcaaggtgaaggatcaatattgcattatggtcaacaacttaaacactgcacattg
ggtccgctctggaatcaactgaagtcatcttgtgaattttcaaaggctcgctatgaagtt
gaccaatttaatattcaaaatcggtggcggaagcgtggtattgccatggttccaacaaaa
tttggcatagcctttacgttaaagcttatgaaccaggcaggtgctcttgttcatgtctac
acagacggaactgttttagtcacacatggaggtgtagagatggggcaaggtttacataca
aaagttgctcaggtcgctgcttccgccttcaatatccctctcagttctgtctttatttcg
gagacaagtactgacaaggttcctaatgcatcaccaacagcagcttctgcgagttctgac
atgtatggagctgcagttctagatgcatgtgagaaaattaaggcacgtatgaagcctatt
gcttcacagcaaaatttcagctcttttgccgagctggcaagtgcatgctatgtggaacgg
atagatctttctgctcatgggttttacattacaccggaaattgactttgattggacaact
ggtaaagggaacccattcaactacttcacatatggggctgcttttgctgaggttgaaatt
gatacattgactggagattttcacaccagagcggctaacgtattcttggatcttggttac
tctctcaaccccgcaattgatgttgggcagattgaaggagcatttgtacaaggtttggga
tgggtagctctagaagaactaaagtggggcgatcctgctcataaatggatctcacccggt
tgcctctacacatctgggccgggaagttacaagattccttccattaatgatgtccccttc
aaattcagcatttcacttctgaagggtcatccaaatgtgaaggccatccactcatctaaa
gctgttggtgagccaccatttttcttggcatcagccgtcttcttcgccatcaaagacgcc
ataatagctgcaagagcagaagtaggatctaatgagtggtttccacttgataatcccgcg
acacctgaacggatacggatgggctgcttagacgaaattattgaaccatttgtaagcaca
gatttccgcgccaagcttagcgtttga
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