KEGG   Malus sylvestris (European crab apple): 126593440
Entry
126593440         CDS       T09027                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03020  RNA polymerase
msyl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    126593440
  09124 Replication and repair
   03420 Nucleotide excision repair
    126593440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msyl03021]
    126593440
   03400 DNA repair and recombination proteins [BR:msyl03400]
    126593440
Transcription machinery [BR:msyl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     126593440
  RNA polymerase III system
   RNA polymerase III
     126593440
  RNA polymerase I system
   RNA polymerase I
     126593440
DNA repair and recombination proteins [BR:msyl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      126593440
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 126593440
NCBI-ProteinID: XP_050115479
LinkDB
Position
12:1094034..1098356
AA seq 145 aa
MADDDYNDVDMGYQDEPPEPEIEEGAEEEDVDNLNNDDDVAGDPIEAEEKEEQEGVERPR
KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
DGSYEDWGVDELIVEDSWKRQVGGD
NT seq 438 nt   +upstreamnt  +downstreamnt
atggcggacgacgactacaacgacgttgacatgggataccaggatgagcctccggagccc
gaaattgaagaaggtgcagaggaggaggatgttgacaatttaaacaatgatgatgacgtt
gcaggagatcccatcgaagcggaggagaaggaagaacaagagggggtggaacggcctcgg
aaaacctcgaaatatatgaccaagtatgagcgtgctagaatcttgggtacccgtgccctg
cagattagcatgaatgcccctgttatggttgaattggagggcgagactgacccgcttgag
attgctatgaaggagcttcgtgagcggaagataccattcaccatacgccgctacctgcct
gatggaagctatgaagattggggcgtagatgaattgatcgtcgaagactcctggaagagg
caggtgggaggtgattga

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