Malus sylvestris (European crab apple): 126595826
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Entry
126595826 CDS
T09027
Name
(RefSeq) biotin carboxylase 1, chloroplastic-like
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00061
Fatty acid biosynthesis
msyl00620
Pyruvate metabolism
msyl00640
Propanoate metabolism
msyl01100
Metabolic pathways
msyl01110
Biosynthesis of secondary metabolites
msyl01200
Carbon metabolism
msyl01212
Fatty acid metabolism
Module
msyl_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
126595826
00640 Propanoate metabolism
126595826
09103 Lipid metabolism
00061 Fatty acid biosynthesis
126595826
Enzymes [BR:
msyl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
126595826
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
126595826
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Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
RimK
GARS_A
ATP-grasp_5
Motif
Other DBs
NCBI-GeneID:
126595826
NCBI-ProteinID:
XP_050118085
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Position
13:complement(22454189..22469334)
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AA seq
527 aa
AA seq
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MDATMPICKTVTPTPGLFFGRTREIRSSQCSFMVGNKVNFLRQRVQGAQVSVKSRKHGGA
LHATCHAEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAA
SSQSYLVVPNVLSAAISRKCTMLHPGYGFLSENASFVEMCKEHGINFIGPKPESIRVMGD
KSTARDTMKKAGVPTVPGSDGLLQSTEEGIRLADEIGFPVMIKATAGGGGRGMRLAKEPE
EFVKLLQQAKSEAAAAFGNDGVYLEKYIQNPRHIEFQVLADKYGNVIHFGERDCSIQRRN
QKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQV
EHPVTEMISSVDLIEEQIHVAMGEKLRYTQEDIVLRGHSIECRINAEDAFKGFRPGPGRI
TAYLPSGGPFVRMDSHVYPDYVVPPNYDSLLGKLIVWAPTREKAIERMKRALDDTVITGV
PTTIEYHKLILDIEDFKNGKVDTAFIPKHEEELQAPQHLVPAAAAKN
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggacgccacaatgcccatctgcaagactgtcacgccaactccgggcttattttttggg
agaactagagagatccgcagttctcaatgtagctttatggtgggaaataaagtcaacttt
ttaaggcagagagttcagggtgctcaagttagtgttaaatccagaaagcatgggggagct
cttcatgctacatgtcatgctgaaaaaattctggtggcaaatagaggggaaattgctgtt
cgcgttattcgaacagcccatgagatgggaataccttgtgtggctgtttactcaacaata
gacaaggatgcacttcatgtgaaattggctgacgaatcagtttgtattggtgaagcagca
agcagtcaatcgtacttagttgttccaaatgttttatctgctgccatcagtcggaaatgt
acaatgttgcatccaggatatggtttcctttctgagaatgcatcatttgttgaaatgtgc
aaagaacatggaatcaattttattgggcctaagcccgagagcatccgtgttatgggtgat
aaatcgactgccagagacacaatgaagaaagcaggtgtcccaactgtacctggaagtgat
ggattactacagagcacagaggaaggaatcaggcttgcagatgagattggttttcctgta
atgatcaaggccacagcaggaggtggaggacgtggcatgcgtcttgctaaagaacctgag
gagtttgtgaagttgttgcagcaagcaaagagtgaggctgcagctgcttttggaaatgat
ggagtttatttggaaaagtacatccaaaatcctagacacattgagtttcaggttcttgca
gataaatatggtaatgttattcactttggagagcgggattgcagcatccagagaaggaac
caaaagcttctggaagaagcaccttcccctgcattgaccccagaactgcggaaagctatg
ggtgatgcagcagttgcagcagcagcatcaattggctacattggtgttggaaccgttgaa
ttccttttggacgaaagaggttccttttacttcatggaaatgaacactcggattcaggtt
gagcatcctgtgacagaaatgatttcctctgttgacttgattgaagaacaaattcatgtg
gctatgggtgaaaaactccgatacacacaggaagatatagtgctcagaggacattcaatt
gaatgccgtatcaatgcagaagatgcttttaaaggattccgacctgggccaggaagaata
acagcatacttaccatctggaggtccctttgttcgaatggatagccatgtttatcctgat
tatgtggttcctccaaactatgattcccttcttggaaagcttattgtttgggcaccaaca
agagaaaaggcgattgagcgaatgaagagggctcttgacgacactgttataacgggggtt
cccacaaccattgaataccataaacttatccttgacatagaggatttcaaaaatggcaag
gttgatactgcttttattccaaagcatgaagaggagctacaagcgccccaacatttggtg
cccgcggccgccgccaagaactag
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