KEGG   Malus sylvestris (European crab apple): 126595870
Entry
126595870         CDS       T09027                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03020  RNA polymerase
msyl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    126595870
  09124 Replication and repair
   03420 Nucleotide excision repair
    126595870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msyl03021]
    126595870
   03400 DNA repair and recombination proteins [BR:msyl03400]
    126595870
Transcription machinery [BR:msyl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     126595870
DNA repair and recombination proteins [BR:msyl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      126595870
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD
Other DBs
NCBI-GeneID: 126595870
NCBI-ProteinID: XP_050118214
LinkDB
Position
13:complement(11508873..11510832)
AA seq 114 aa
MSTMKFCRECNNILYPKEDKEQKSLLYACRNCDHQEIAETNCVYRNEIHHAVGERTQILQ
DVAADPTLPRTKAVRCAECKHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtaccatgaaattttgccgcgaatgtaacaacattctgtacccgaaggaggacaag
gagcagaagagcctcctctacgcctgccgcaactgcgatcaccaggagattgctgagacc
aactgtgtctacagaaacgagatacaccacgctgtgggtgagcgcactcagatattgcag
gatgtagctgcagatcctactcttccaagaactaaagccgtgcgctgtgctgagtgcaag
catggagaagctgttttctttcaggcaactgctagaggagaggagggtatgacattgttc
ttcgtctgctgcaaccccagctgcggccataggtggagagactaa

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