Malus sylvestris (European crab apple): 126611010
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Entry
126611010 CDS
T09027
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00900
Terpenoid backbone biosynthesis
msyl01100
Metabolic pathways
msyl01110
Biosynthesis of secondary metabolites
Module
msyl_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
126611010
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msyl01006
]
126611010
Enzymes [BR:
msyl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
126611010
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
126611010
2.5.1.29 geranylgeranyl diphosphate synthase
126611010
Prenyltransferases [BR:
msyl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
126611010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
126611010
NCBI-ProteinID:
XP_050135152
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All DBs
Position
17:31530986..31532430
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AA seq
334 aa
AA seq
DB search
MALFAAILRSYRSPALLRNPIIGLMKFHSTVTKLTGHSSVFEFDEYKAAKAKMVDEALNA
AVPVQHPDIIHRAMRYSLLGGGKRVLPVLCVASCELVGGDESLALPTACAFEMIHACSLI
QDDLPCMDNADLRRGKPTSHKVFGEDAAVLAGDALLALAFEHIAAKTTKAVSPGRVVRAI
AEIGSAVGSLGVVAGQMMDIQSEGKEVTLRELEYIHAHKTARLFEATAVCGALMGGGNDI
EVERLRKYAGSIGLLYQVVDDILDVTKSSEEMGKTAGKDLVSDKATYPKLMGIEGAKDFA
AKLETQALEELAHFDAARAAPLYCFANFVAKRQR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggctctttttgcggcgatcctccgaagctaccgaagtccagcacttctcagaaacccc
atcattggcctcatgaagtttcattcaaccgttacaaaacttaccggtcactctagcgtg
ttcgaatttgacgaatacaaggcggcgaaggcgaagatggtggacgaagcgttgaatgcg
gcggtgccggtgcaacatcccgacataatccatagggcaatgaggtactcgcttttgggt
ggcggcaagcgtgtactcccagttttatgcgttgcttcatgtgaactggttggaggggat
gagtctcttgcccttccaacagcttgtgctttcgaaatgattcacgcctgctcacttatc
caggatgatctcccctgcatggacaacgccgatcttcgacgtggaaaacccacgagccac
aaggtttttggtgaagatgctgcggttttagccggtgatgcgcttctagcccttgccttt
gaacacattgcggctaagacaacaaaagcagtctcgccggggcgcgtggttcgagccatt
gcagagattggttcggcagttgggtcattaggcgtcgtggcgggtcaaatgatggacatt
caaagcgaaggtaaagaagtgacgctgcgagaactggagtacattcatgcgcataaaacc
gcaaggctctttgaggctacggcagtttgtggagcactaatgggaggagggaacgacatt
gaggtagaaaggttgaggaagtatgctggttccatcggcctgttgtatcaagtggtggat
gacattttggatgtcacgaaatcgtcggaggaaatgggaaagacggcggggaaagacttg
gtaagcgataaggcaacatatcccaagctgatggggattgaaggggcaaaggattttgct
gccaagttggagactcaagcattggaagagcttgctcatttcgatgctgctagggcggct
ccattgtactgtttcgctaatttcgtagccaagagacagaggtag
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