Malus sylvestris (European crab apple): 126618475
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Entry
126618475 CDS
T09027
Name
(RefSeq) ABC transporter B family member 1-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126618475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msyl02000
]
126618475
04147 Exosome [BR:
msyl04147
]
126618475
04090 CD molecules [BR:
msyl04090
]
126618475
Enzymes [BR:
msyl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
126618475
Transporters [BR:
msyl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
126618475
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126618475
CD molecules [BR:
msyl04090
]
Proteins
126618475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Zeta_toxin
AAA_29
AAA_21
RsgA_GTPase
AAA_15
nSTAND1
AAA_5
AAA_30
SbcC_Walker_B
APS_kinase
DUF87
Rad17
DUF5639
DUF1360
Motif
Other DBs
NCBI-GeneID:
126618475
NCBI-ProteinID:
XP_050142509
LinkDB
All DBs
Position
4:15705217..15711437
Genome browser
AA seq
1345 aa
AA seq
DB search
MSQDSEGIKTIEQWRWSEMQGLELLPDAADPFKTNPAANPATPSNPSATTSTPQGAERME
SSEPRKDSTGGGEKPDSLPAVQFKELFRFADGLDYVLMAIGSVGALVHGCSLPIFLRFFA
DLVNSFGSNANDMDKMMHEVLKYALYFLVVGAAVWAGSWAEISCWMWTGERQSTKMRIKY
LEAALSQDIQYFDTEVRTSDVVFAINTDTVMVQDAISEKLGNFIHYMATFVSGFVVGFTA
VWQLALVTLAVVPLIAVIGGIHTTALGKISGKSQEALSQAGHTVEQTVAQIRVVLSYVGE
SRALQAYSSALKVAQKLGYKSGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHFTNGGL
AIATMFAVMLGGIGLGQSVPSMGAFVKAKVAAAKIFKIIDHKPGMDRNSEAGVELESVTG
LVELKNVDFSYPSRQDVRILNNFSLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPSSGQ
VLLDGHDIKTLKLKWLRQQIGLVSQEPALFATTIKENILLGRPDADQVEIEEAARVANAH
SFIIKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQ
EALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFLKGENGVYAKLIRM
QEMAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSFSLDA
SYPNYRLEKLPFKEQASSFWRLAKMNSPEWVYALFGSVGSVVCGSLSAFFSYVLSAVLSV
YYNPDHAYMIKQINKYCYLLIGLSSAALIFNSLQHFFWDIVGENLTKRVREKMLTAVLKN
EMAWFDQEENESARISARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLTL
VLIAVFPFVVAATVLQKLFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSEGKIVGL
FSRNLQIPLRRCFWKGQIAGSGFGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFV
VLMVSANGAAETLTLAPDFINGGRAMRSVFELLDRKTEIEPDDPDATVVTDRLRGEIELK
HVDFTYPTRPDVPIFRDLSLRARAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVLIDG
KDIRKYNLKSLRRHIALVPQEPCLFATTIYENIAYGHESATEAEIIEAANLANAHKFISA
LPEGYKTFVGERGVQLSGGQKQRVAIARALLRKAEVMLLDEATSALDAESERSIQEALER
ACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNYPEGCYARMIQLQRFTH
TQAVGIASGSSSSIKPLEEEEREGK
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagattctgaggggataaagacgattgagcagtggagatggtccgaaatgcaa
ggccttgagctgctgccggatgctgccgatccttttaaaaccaacccagcagcaaaccca
gcaaccccatctaacccatcagcaacaacatcaactccccaaggggcggagagaatggag
agctccgagcccagaaaggactccaccggcggcggcgaaaagccagattctttacccgca
gttcagttcaaagaactcttcagattcgctgatgggttggattacgttctgatggcaatt
ggatcagtcggagctctcgtgcatggctgctctctccccatttttctccggttcttcgcc
gatcttgttaattcttttggctcgaatgcaaacgacatggataagatgatgcacgaggtt
ttgaagtacgcattgtactttctggtggttggagctgccgtatgggcgggttcatgggcc
gagatttcttgttggatgtggaccggagagcggcagtcaaccaagatgaggatcaagtac
cttgaggccgctctgagccaggacattcagtactttgacacggaggttcgaacttcggac
gtcgttttcgcaatcaacaccgatacagtgatggtccaggacgccattagtgagaagttg
ggtaatttcattcactatatggcaacatttgtgtcaggattcgtggtgggttttactgct
gtgtggcaattagcacttgtcacacttgctgttgttccgctgatagcggtgatcggaggc
attcataccaccgcattaggcaaaatctcaggcaagagccaagaagctctttcacaagca
ggacacacggtggaacagactgtagctcaaattcgagttgttttgtcgtatgttggggaa
tcgagagcgctacaagcatactcctcggcattgaaggtggctcagaagcttggttacaaa
agtggatttgctaaaggaatgggactcggagcgacttactttgtagttttctgctgttat
gcacttcttctatggtatggaggttatcttgttaggcaccacttcaccaacggcggtctt
gccatcgctaccatgtttgctgtcatgctaggtggaataggattgggacagtctgtccca
agcatgggcgcatttgtgaaggctaaagttgcagctgcgaagattttcaaaattattgat
cacaaaccgggcatggaccgcaatagcgaagcaggagtggaattagagtctgttaccgga
ctagttgagctgaaaaatgtagatttttcctacccttcgaggcaggatgttcgtatcctc
aacaatttctcgctgaatgttccggctggaaagaccattgctttggttggtagcagtggc
tctggtaagagcactgtggtctccctcattgagaggttttatgatccttcctcaggacaa
gtgctgctagatggacatgacataaagacattgaaactaaagtggctgaggcagcaaatt
gggcttgtgagtcaagaaccagctctgtttgctaccaccattaaagaaaacatacttttg
gggcggcctgatgccgaccaggttgagatcgaagaagctgccagagttgccaatgcccat
tcatttattatcaaacttcctgacggttttgatactcaggtaggggagagaggactacaa
ttgtctggaggacagaagcagagaatagccatagcaagggcaatgttgaaaaacccagca
atcctgctattagacgaggcaacgagtgcattggactctgagtcggaaaagctggtgcaa
gaagcccttgaccggtttatgattggaaggacaactcttgtcattgcccatcgcctatca
accattcgcaaagctgaccttgtagctgtactccaacaaggaagtgtttctgaaattgga
acccatgatgaacttttcttgaaaggagaaaacggtgtctatgccaagctcatccggatg
caagagatggcacacgaaactgctctcaacaatgcgagaaagagtagcgcaaggccttct
agtgccagaaactctgtaagctcacctataattgccagaaattcctcatatggtcgatca
ccatactcacgccggctatcggacttttctacttctgattttagcttctcccttgatgcc
tcatatcccaattaccgacttgaaaaactaccgttcaaggagcaagctagttccttctgg
cgccttgctaaaatgaactctcctgagtgggtttatgctttatttggttcagttggatct
gttgtttgtggttctctaagtgctttcttttcatatgttctaagtgctgtcctcagtgtt
tactacaacccggaccatgcctacatgatcaaacaaattaataagtactgttacttgtta
attgggctttcatcagctgcacttatcttcaactcattacaacatttcttttgggatatt
gtgggagaaaacctcacaaaacgagtgagggagaaaatgctgacagcagttttgaaaaat
gaaatggcgtggtttgatcaggaggaaaatgagagtgccaggatttcagcaaggctggct
cttgatgctaacaatgtcagatcagccataggagacaggatttctgtgattgtacagaac
acagcactcatgcttgttgcttgcactgcaggatttgttttgcaatggcgccttaccctt
gtcctcatagcagtctttccttttgttgttgcagccacagttttgcagaaattgttcatg
acgggtttctcgggagaccttgaagcagcacatgccaaggccacccaactagctggggag
gccatagccaatgtaaggactgttgctgcattcaattcagagggaaaaattgttggtctt
ttctccagaaacctccagattccactacgccggtgcttttggaagggccagattgctgga
agtggatttgggatagctcagtttgcactttatgcttcctatgctctaggtctttggtat
gcttcttggctagtgaagcatggaatctccgacttctcaaagacaattcgagttttcgtg
gtcctcatggtgtctgcaaatggtgcagcagaaacattaaccctggcgcctgactttatc
aatggtggtcgagccatgcgatcagtgtttgaactccttgaccgcaaaactgaaattgaa
cctgatgatccagatgctactgtagtcactgatcgtctgcgtggagaaattgaattgaag
catgtagacttcacttaccctactcgccctgatgtccctattttccgtgacctctccctt
cgtgcccgagcaggcaagactcttgcccttgttggtcctagtggatgcggtaagagctca
gtcattgcactgatacagcgattctacgacccaacatcaggacgagttctgattgatggg
aaggatattcgaaaatataatctgaagtccctaagaaggcacattgccttggttccccag
gagccatgcctctttgcaacaactatatacgaaaatattgcttatggacacgagtcagca
actgaggctgagatcattgaagctgcaaacctggctaacgctcacaagttcatatctgca
ttgccggagggttacaaaacatttgttggggaacggggagttcagttatctggaggacag
aaacaaagagttgcaattgctagggctttattgaggaaggcagaggttatgcttcttgat
gaggcaacaagtgcacttgatgctgaatcagagagatctattcaagaggcactagagcgt
gcttgctcgggaaaaaccacaattgtggttgcacacagactatcgaccatcagaaatgca
catgtcattgcagtgattgatgatggaaaggtggcagagcaaggatcccactcccatcta
ttgaaaaattacccggaagggtgttacgcgcgcatgatacagctacaaagattcacccac
acccaagccgttggaattgcatcaggttcaagttcatcaataaaacccctagaagaggaa
gaaagagaaggaaagtaa
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integrated database retrieval system
