Malus sylvestris (European crab apple): 126622210
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Entry
126622210 CDS
T09027
Name
(RefSeq) nuclear-pore anchor-like
KO
K09291
nucleoprotein TPR
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126622210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126622210
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126622210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
126622210
NCBI-ProteinID:
XP_050146839
LinkDB
All DBs
Position
5:36246787..36267330
Genome browser
AA seq
2101 aa
AA seq
DB search
MPLFVSDEDFSRHGNDAVWVADKADAYIRDLYKELETVRAQNDAASITAEQTCSLFEQKY
LSIADEFSKLESQYAQLQSSLDSRLSEVAELQSQKHQLHLQSIGKDGETERIKAEVSELH
KSKRQLIELVEQKDLEISEKNATIKSYIDRIVLSSDNAAQREARLSEAEAELARTKAACT
RLSQEKELIERHNVWLNDELTEKVNSLVRLRRTHADVEADLSSKLADVERQFNDCSSSLK
WHKQRVGELGDRLTSLQEELHSSKDAAAANEERLTAELSTLNKLVELYKESSEEWSKKAG
DLEGVIKALETHLNQEENDYKERLERAESARNQLEKEAADLKVKLEKCEAEIEASRKSTE
LNLLPLSSFSTEAWMNSFESTDIMEADQAVVPRIPAGVSGTALAASLLRDGWSLAKMYAK
YQEAVDAFRHEQLGRKESEAVLQRVLYELEEKAEVIFDERDEHERMVEAYSMINQKLQNS
ISEQANLEKTIQELKAEVRRHERDYTFARKEIADLQREVTILLKECRDIQLRGTSSGHDS
HDYDTVAVVEMNTESDAERVISEHLLTFKDINGLVDQNVQLRSLVRNLSDQLENREMEFK
ENFEMEIKKHTDEAASRVAAVLQRAEEQGRMIESLHTSVAMYKRLYEEEHKLHSSSPCIE
EATPEERRTDVKLLFESSQEATRKAQDQTAERVKCLEEDLASTRSEIISLRSERDKLALE
ANFSRERLESFIKEFEHQRNETNGVLARNVEFSQLIVDYQRRLRESSESVQTAEERTRKL
TMEVSVLKHEKEMLEHAEKRACDEVRSLSERVHRLQASLDTIQSAEEVREEARAAERRRQ
EEYTKQIEREWADVKKDLQEERNNARTLTLDREQSVQNAMRQVEEMGKELANALHAVASA
ETRAAVAEAKLTDLNKRIKSSDVKVVDVDGGSGSSSLTSDEALVTLRAAKEEIEKLKEEV
QANKDHMLQYKSIAQVNEDALRLMESAHENFKIEAEKLKKSLEVELLSLRERVSELEHEC
SLNSQEVASAAAGREEALSSTLSEITSLKEETLTKTSQIVSLEIQISALKEDLEKERQRS
RSAQANYERQVILQSETIQELTKTSQDLAMLQEEMSELRKLVDALKGENNELKSKWEFEK
AILEESKNVAEKKYIEINEQNKILHSQLEALHIQLTERDRGSVGTSAITGPDISGDAGLQ
NVISYLRRTKEIAETEISLMKQEKLRLQSQLESALKASETAQSSLHAERTNSRSLFTEEE
MKSLQLQVREMNLLRESNIQLREENKHNFEECQKFREISQKASAETENLERLLQERQIEL
EACKKEIEMQKTEKEHSEQRVRELLERYRNIDVQDYDRAKDDVRQLQKKLEEKDSEILEV
KKLLSEKMETVSRLERDIANCRLELTEMEKRMSDALQAEASLKSEIEKHRKMATQYKRRL
EMFSREKETVSKEKETLSKEKEELSKENQALSRQLEEVKLVKRASVDTTGVQAIREEKDQ
KIQLLEKHLERQREELRKEKDENRMEKAMRKKMEKAVTDSYNNVDQDKSNFMNELEKHKQ
ALKQLSDELEKLKHAKDSLPQGTSIVQMLSGTILDGLAAAYGLAVENFEKTAHSVHSEFG
AHGVLANTPPVADTSLPATSGTAQASTVMSSTSPARGLVSKATEERGLASTATEESAKTI
TLPKGNVETRKQGRRLVRPRLVRPEEQQGDVEMSEMEGTRNGGKQAPSNEMEVQGNATLP
QQLLRKRLASSSTFESREESNNQGEICPEVAAPVSKKAKGSDSLQGTEGQPSAISENLGS
VPVKDEPLDVAVDLPQSSSEEAAVDAEKEETETAGEKVEEPNERQFDGLSQVESQKDSDL
VENVDGSDGKDLPSHDGAKDQVELEQQSSDFGGDREEGELVPDISELEGGDAMGSPEIGE
VQPEPVTTPEASPARGDDYGVAAGSVVDIGEVNSPEVLNDEKNDDIDATEEAADGSDKSI
DGNDHTLTETDQAAEATSVIVDTTSTSTTAEVSVSKQASPSVTAGEVRQVSPVIIPSTTI
NLTTRALENARRRQQARGLSTSPSTGRGGPAGRQTGRSGRGPPGRGRGRGRSRGSTSGNQ
G
NT seq
6306 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcttcgtctccgacgaggacttctcccgccacggcaacgacgccgtctgggtg
gcggacaaggccgacgcctatattcgggacctgtacaaggagcttgagaccgtcagggcc
cagaacgacgccgcttccatcacggccgaacagacctgctccctcttcgagcagaagtac
ctttccatcgccgacgaattctccaagctcgagtctcaatacgcgcagcttcagtcctcc
ctcgacagccgcctctccgaggtcgccgagctccagtcgcagaagcaccagctccatctc
caatccattgggaaggatggggagacagagaggattaaggcggaggtgtcggaattgcac
aaatcgaagaggcagttgatagagttggtggagcaaaaggacttggaaattagtgaaaag
aacgccaccatcaagtcctatatcgacaggattgtattatcttctgacaatgctgctcaa
agggaggcccgtttgagcgaagcggaggcagaattagcacgtaccaaggctgcatgtact
cgtctatcacaggagaaagaacttattgagaggcataatgtctggcttaatgatgagtta
acagagaaagttaacagtctcgttcggctgcgtagaacgcatgctgatgttgaggcagat
ttgtcttctaaacttgcagatgttgagagacaattcaatgattgctctagctctttaaaa
tggcacaagcaaagagtgggggaattaggcgacaggctgacgtctttacaggaggagctc
cactcatctaaagatgctgctgcagccaatgaagagcgattaaccgctgaactctcaaca
ttaaataagcttgttgaactatacaaagaaagttctgaggaatggtccaaaaaggcagga
gaccttgaaggtgtgatcaaggctctggagacacatttgaatcaagaggaaaatgattac
aaggaaagacttgaaagagcagagtctgcaagaaatcaacttgagaaggaagctgcagat
cttaaagtgaaacttgaaaaatgtgaagcagaaatcgaagctagcaggaaatcaactgag
cttaatcttcttccactcagtagttttagtaccgaagcatggatgaattcatttgaatct
accgacattatggaggctgatcaagcggttgtcccaaggattcctgctggtgtttcagga
acagcattagcagcttcacttctgcgggatggctggagtcttgcaaaaatgtatgctaag
taccaagaggctgttgatgcctttcgtcatgagcagttgggaaggaaggaatctgaggca
gtcttgcaacgggttctatatgaattagaggagaaagcagaagtcatttttgatgaaaga
gatgaacatgagagaatggttgaggcatattctatgatcaaccagaaattgcagaactcg
atttctgaacaggcaaacttggagaagaccatccaggagttaaaggctgaggtaaggagg
catgagcgtgactacacgtttgcacgaaaagagattgctgatctccagcgagaggtgaca
atccttctgaaggaatgccgtgatatacagcttcgtgggacatcatctggtcatgatagt
catgactatgatactgtcgccgttgttgagatgaacactgaatctgatgccgagagagtg
atatctgaacatcttttgaccttcaaggacataaatggactagttgatcagaatgtgcag
ctcaggagccttgttcggaatctttctgaccagcttgaaaatagggaaatggagttcaag
gagaattttgaaatggagatcaagaagcacactgatgaagctgcctctagagttgcggca
gtgttacaaagagctgaagagcaagggcgcatgattgaatcccttcacacctctgttgca
atgtacaaaaggctatatgaagaggagcataaacttcattcgtctagtccttgtatagaa
gaggctactccagaagaaagaagaactgacgtcaagcttctctttgagagttctcaggaa
gctacaagaaaggcccaagaccagacggcagaacgagtgaaatgtctggaggaagatctg
gcaagtaccaggagtgagatcatatcgttgcggtcagagcgtgacaagttggctttggaa
gcaaatttttctcgagagagacttgagagctttatcaaagaatttgagcatcagagaaat
gaaacaaatggtgttttagcaagaaacgttgagttctctcagttgatagttgactaccaa
cgaaggctgcgtgaaagttctgaatctgttcaaactgctgaggagcgtactaggaagttg
actatggaggtgtctgttttgaagcatgaaaaggaaatgttggaacatgctgagaagcgt
gcttgtgacgaagttcgtagtttgtcggaaagggtccatagactgcaggccagcttggac
actattcagagtgccgaggaagttcgtgaggaggcaagagctgctgagaggagaagacaa
gaagagtatacgaaacaaatagagagggagtgggctgatgtcaagaaagatctacaagaa
gagcgaaacaatgcccgtactctcacacttgaccgtgagcagtccgtacaaaatgctatg
agacaagttgaagaaatgggaaaagagttggctaatgctttgcatgctgttgcatctgct
gagactagagctgctgtagccgaggctaaactgactgatctgaacaaaaggattaagtcc
tctgacgttaaggttgttgatgtcgatggtgggagcggatcctcctccttgactagtgat
gaggctttggtgacattgcgtgctgcaaaggaagagattgaaaagttgaaagaggaagtg
caagctaacaaggatcacatgctacagtataagagcatagctcaggtaaatgaagatgca
ttgaggctgatggaatctgcccatgaaaacttcaagattgaggccgaaaaactaaagaaa
tcgcttgaagtcgaacttctttctctaagagagagagtatctgaacttgaacacgagtgt
agtttgaattctcaagaagttgcttcagcggctgcaggaagggaagaagctctttcttcc
actctatcagaaattacaagtttaaaggaagaaaccttaactaaaacttcccaaattgtg
tcactggagattcagatatctgctttgaaagaagacttggagaaagaacgtcagcgatca
cgttctgctcaggccaattatgaaagacaggttatcctccagtccgagacaatacaggag
ttgaccaagacatcgcaagatttggctatgctccaggaagaaatgtcagagttgcgtaaa
ttggttgatgcactcaaaggcgaaaataatgaactcaagtctaagtgggaatttgagaag
gcaatattagaagaatcaaaaaatgttgccgagaagaagtacattgaaatcaacgaacag
aacaaaatactgcacagtcaacttgaggctttgcacattcaactgactgaaagagatcgt
ggttcagttggaacttctgcaatcactggtccagatatttcaggtgatgctggtttacaa
aatgtgataagttatcttcgacggacaaaagaaattgcagagacagagatttccttaatg
aaacaagaaaagcttcgattacaatcacaacttgagagtgccctcaaggcttcagaaaca
gcccagtcatcacttcatgccgagcgcactaattcaagatcattgttcactgaggaggaa
atgaaatccttgcaactacaggttagagaaatgaacttacttcgtgaaagcaatatccaa
ctcagagaagaaaacaagcacaattttgaggaatgccagaaattccgtgaaatatcacaa
aaagctagtgctgagactgagaacctagagagattgctacaggagaggcagattgagttg
gaagcctgtaagaaagaaattgaaatgcaaaagacagagaaagaacactcagaacagagg
gttcgtgagttacttgaaaggtatagaaatattgatgttcaagattatgatcgcgcaaag
gatgatgttcgtcagttgcagaaaaaattggaggagaaggattctgaaatactagaagtc
aagaaacttctttcagaaaagatggagactgtatcacgtctggagcgagatattgctaac
tgcagattggaactgactgagatggagaagagaatgagtgatgctttgcaagctgaggca
agtctaaaatcagaaatcgagaagcataggaagatggccactcagtataagaggaggctc
gaaatgttctcaagagaaaaagagaccgtttcaaaagaaaaggagacactgtccaaggaa
aaggaggaactgagcaaggagaatcaagctctttctagacagctggaggaagtcaaatta
gtgaaacgagcatcagtagatactaccggggtgcaagcaattagggaagagaaagaccag
aaaattcagcttctggaaaagcatttggagaggcaaagagaggagctgagaaaggagaag
gatgaaaatcggatggagaaagcaatgcgcaagaagatggagaaggctgtaacagattcc
tataataatgttgaccaggacaagtcgaacttcatgaatgaactcgagaagcataagcag
gctttgaagcagctttcagatgaacttgaaaagctgaaacatgcaaaagacagtctccct
cagggtacctcaattgttcaaatgctttcgggaaccatactggatggtcttgctgctgcc
tacggtttagctgtcgaaaatttcgaaaagacagcacattcagttcacagtgagtttggt
gctcacggtgttcttgcaaacactcctccagttgcagatacttcattaccggctacctct
ggtaccgctcaagcatccacggttatgtcttcaacgagtcctgcaaggggcttagtatcc
aaagcaactgaagagaggggcttagcatccacagccactgaagaaagcgcaaaaacaatc
actttacccaaaggcaatgtcgaaacccgtaaacaaggaaggagattggttaggccccgg
cttgtaagacctgaagaacaacaaggtgatgtagagatgtcagagatggaagggacccgc
aatgggggcaaacaagcaccatcgaatgaaatggaagttcaaggcaatgctactttgcca
caacagctgcttcggaaacgtcttgcttcttcatctacttttgagtcccgtgaggaatca
aataaccaaggggaaatttgtcctgaggtggcagcacctgtttcaaagaaggccaaaggt
tcagattctctacaagggactgaagggcagccatctgctatttcggaaaatcttgggagt
gttccagtcaaagatgaacctttagacgtcgctgttgatttgccgcaaagttcaagtgag
gaagctgctgttgatgccgagaaagaagaaactgagactgctggggagaaggttgaagag
ccaaatgaaagacagtttgatggtttgagtcaagttgaatcacagaaggatagtgattta
gtggagaatgtggatggatcagatggaaaagatctaccatcgcacgatggagccaaagat
caggttgagctagagcaacagtccagtgattttggaggagaccgagaagagggagagctg
gtccctgatatttctgagcttgaaggtggtgatgcgatgggcagtcctgaaataggggaa
gttcaacctgaacctgtaacaactcccgaggcttccccagctaggggcgatgattacggt
gttgctgctggttctgttgtggatatcggtgaggttaattctccagaggttcttaatgat
gagaaaaatgatgacattgatgcaactgaagaagctgctgatggttccgataagtcaatt
gatggtaatgaccatactttgacggagactgaccaggctgccgaagctacctcagtaatc
gtagataccacttcaacaagtaccacagcagaagtaagcgtttcaaaacaagctagtccc
agtgttactgcaggagaggtgagacaggtgtctcctgtgattattccgtcaactaccata
aatttaacaacacgagctctggagaatgcacgccgaagacaacaggccagagggctctct
acttcaccaagcacaggtcgtggaggacctgccggaagacaaactggaagatctggacgt
ggacctcctggacgtgggcgtgggcgcggacgttctcgtgggtcaacatcaggcaatcaa
ggttga
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integrated database retrieval system