Malus sylvestris (European crab apple): 126625261
Help
Entry
126625261 CDS
T09027
Name
(RefSeq) LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase CMT2-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00270
Cysteine and methionine metabolism
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
126625261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msyl03000
]
126625261
03032 DNA replication proteins [BR:
msyl03032
]
126625261
03036 Chromosome and associated proteins [BR:
msyl03036
]
126625261
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
msyl02048
]
126625261
Enzymes [BR:
msyl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
126625261
Transcription factors [BR:
msyl03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
126625261
DNA replication proteins [BR:
msyl03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
126625261
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
126625261
Prokaryotic defense system [BR:
msyl02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
126625261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
126625261
NCBI-ProteinID:
XP_050150306
LinkDB
All DBs
Position
6:complement(2975392..2994145)
Genome browser
AA seq
1203 aa
AA seq
DB search
MRERGHIFLPSLSSLESSEERNCFPPFPSLRFNNFHLFHHLPKIPXPPPQKKRNKMWAPP
KPNSDSKSESKSESEPMALSVLVENVACEEEAVPLNSHDHDDPRLRRKIQQRRPECVRRS
PRLSPLPPAQKEEVVKDTSANAASRKIDDAKRASVRRSPRFTSSVLEEADSSKIKTPSVQ
HKRYKGGTIGSNDDEQKYTVSNVESLAEKSMRRSLRLMNQSAVESCCLKVSSQERSLRKF
ESPEEGCPKALSLNTSNVETSSRDTEVKHPSLSWHGESDKRPTPLRRSSRLMSAPEDNFD
GEKLDEKHIRRSPKFSPCLDVAKETSNLNSSFIGLSDSEDGFSSKKILISLGKSDSKIFD
ETHLGQSQRRTRSMFEAERRESECALIELPETYVKQTPKKRKTLDSSKNKQNKQENIKSA
SFIGDPIPDVEAQERWGWRYRMKSQRSKRQSLKLNEDEEDEIILDVECHFSQAKIGDCIF
DLGDCAYIEGDEGQKHVGRVIEFFKTADGEKYFRVQWFYKVEDTVIKEVGTSHDKKRLFY
STVMNDNLIDCIISKVNVTHISPKVGLKVNSISPSDFYYDMEYCVDYSTFRSFISDNSVK
SHNMPSCNSIQAVGTLSTSNLLENMPSSETYKAELALLDLFCGCGGMSTGLCFGAKLSCV
NLVTKWALDSDKSACESLKLNHPETQVRNETAEDFLQLLKEWEKLCRRHKANDVERTHPL
RSKTLSVPKNGNEVGTGEYEVSRIVDICFGDPNKTGKRGVNLKVHWKGYGSSEDTWEPIE
GLSNCQESIQDFVRNGRKVKILPLPGDVDVICGGPPCQGISGYNRYRNVDSPLDDERNHQ
IVVFMDIVNFLKPKFVLMENVVDILRFDKASLGRYALSRLVHMKYQARLGILAAGCYGLP
QFRLRVFLWGAHACENLPQFPLPTHDVIVRYWPPPEFERNTVAYDEEQPRELLEKALVLR
DAISDLPSVSNNEKREEMPFQKPPETDFQRYIRSTQHEMMGSAFDGTTKATVSLYDHRTY
HLNEDDYLRVCQIPKRKGANFRDLPGVVVGSDNVARRESTEKHSLLPSGRPLVPDYCFTY
EQGKSKRPFARLWWDETVPTVLTFPSCHNQVVLHPEQDRILTVRESARLQGFPDYYRFCG
TVKERYCQIGNAVPVSVARALGYALGLAVRKLSGNDPLMTLPNKFSHSNFFQFTKNLPLE
TEE
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaaagaggacatatatttttgcccagcctctcttctttggagtcatcggaagaa
cgaaactgcttcccaccgtttccttctttgcgtttcaataatttccatttatttcaccat
ttgcccaaaatccccnccccccccccccaaaaaaaaagaaataaaatgtgggcgccacca
aaacccaactccgattccaaatcggaatcgaaatccgaatcggaaccgatggcattgtcg
gtgctcgtggaaaatgtggcttgtgaggaggaagcagtgccactgaactcgcacgaccac
gacgacccacgactacggcgcaagattcagcagcggcggcccgagtgcgtgagaaggtcg
ccgagactgtcgccgttgccgccggcacagaaggaggaggtcgtcaaggatacttcggca
aatgcagcttccaggaagatcgacgacgccaagcgtgcgagtgtgagaaggtctcccaga
tttacgtcatccgtcctggaagaagctgatagcagcaagattaagactccatcagttcag
cataaaaggtacaagggtggaaccatcggatcaaatgatgatgaacagaaatatacagta
tcaaatgtagaaagcttagcagagaagtctatgaggagatctctaaggttgatgaatcag
tctgcagtggaaagctgctgtctgaaagtttcttcgcaagagagatctctaagaaaattc
gaatcccctgaagaaggctgccccaaggccctgtcattaaatacttctaatgtcgaaaca
tcatcaagagacacagaagtcaagcatccatctctttcatggcacggagagagtgataag
agacctacacccttgaggaggtcttcaaggttaatgtcagctcctgaagacaattttgat
ggtgaaaagttggatgaaaagcacataagaagatctcctaagttttccccttgtttggac
gtggctaaggaaacttccaatctaaattctagtttcattggattgtctgattcggaagat
gggttttcttccaagaagatattgatctcattaggaaaatctgattcaaaaatttttgac
gagacacacttggggcaatcccaaagaagaaccagatcgatgtttgaggctgaaagaaga
gaatcagaatgtgctttgattgaattgcccgagacctatgtgaaacaaacaccaaagaaa
aggaaaaccttagattcatcaaagaacaagcaaaacaaacaagagaacatcaaaagtgct
tctttcattggagatccaattcctgatgttgaagctcaagaaagatggggttggcggtat
cgaatgaagagtcaaagatctaaaagacaaagcttgaagctaaatgaagatgaagaagat
gagataattttggacgttgaatgtcacttttctcaagctaaaattggcgattgcatcttc
gatcttggagattgtgcttacatagagggtgatgaaggacaaaagcatgtgggaagggtc
atagaatttttcaagacagctgatggagaaaaatattttagagtccagtggttttataaa
gttgaagatacggttattaaagaagtaggaacttctcatgacaagaagcgtttgttctat
tctaccgtaatgaacgataatttgatagattgcattatttcaaaagtcaatgttacacat
atatcccctaaggtagggttaaaagtgaactccatttcgccgtctgacttctactatgat
atggaatactgtgtggactattccacatttcgctccttcatctctgataattctgtgaag
agccacaacatgccatcatgcaattcaatccaagcagttggtacactgtcaacttcaaac
ttactggagaatatgcccagctctgaaacttacaaagcagaattagccctcttagatctt
ttttgtggttgtggtggaatgtcaactggattgtgctttggtgctaaactttcctgtgtt
aatcttgtcacgaaatgggcccttgacagtgataaatctgcctgtgaaagcttgaagtta
aatcatccagaaacgcaagtcaggaatgaaactgctgaggattttctacaactgttgaag
gaatgggaaaagttatgcagaaggcataaggccaatgatgtcgaaagaactcatccatta
agatcgaagaccttaagtgtaccaaagaatggtaatgaggttggtaccggtgaatatgaa
gtttcgaggattgttgatatttgctttggtgatcctaataagacaggcaagcgtggagtg
aaccttaaggtgcattggaaaggttatggtagcagtgaagatacatgggaaccaattgaa
ggcttaagtaactgccaagaaagtatacaggattttgtaagaaatgggaggaaagtgaaa
attttgccacttccaggagatgttgatgtaatttgcgggggccctccttgccaaggaatt
agcggctataatcgctatagaaacgttgattctccattggatgatgagaggaatcatcaa
attgtagtcttcatggatattgtaaacttcttgaagccaaagtttgtgctgatggaaaat
gttgttgacattttgagatttgacaaagcttctcttggaagatatgcacttagtcgtttg
gtgcatatgaagtaccaagcgaggctgggaatacttgctgccggttgttatggccttcca
caatttcggttgcgtgttttcttgtggggtgctcatgcttgtgagaatctgccacagttt
cctcttccaacacatgatgtcatagtgagatactggcctccaccagagtttgagcggaac
actgttgcttatgatgaagaacaacctcgtgaattattagaaaaagctcttgttcttcgc
gatgccatctcggatcttccttctgtctcaaacaatgaaaaaagagaagaaatgccattc
caaaagcctcctgaaacagatttccaaagatatataaggtcaacacagcatgagatgatg
ggatctgcgtttgatggcactacgaaagcaacagtttcactatatgaccatcggacttac
cacttaaacgaagatgattacttacgagtttgtcagattccaaaaagaaagggagcaaat
ttccgggatctacctggtgttgttgttggaagtgacaatgtggctcggagagagtcaact
gaaaagcattctctgttgccatctggaaggccattagtaccagactattgctttacttat
gaacaaggcaaatcgaaaagaccgtttgcgaggttatggtgggatgagacagtgcccact
gtgcttactttcccaagttgtcacaaccaggtagtattacatccggagcaggaccgaatt
ctcactgtacgtgaatctgcaagattgcaaggctttcctgattattataggttctgtggg
acagttaaagagaggtattgtcagattggaaatgcagttccagtttcggttgcacgagct
ttaggatatgcgttgggattggcagttcgaaaactcagtggaaatgatccactcatgact
ctccccaataagttttctcattcaaacttcttccaattcacaaaaaatttgcctctcgag
accgaagagtaa
DBGET
integrated database retrieval system
