Malus sylvestris (European crab apple): 126625983
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Entry
126625983 CDS
T09027
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126625983
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msyl01009
]
126625983
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126625983
03036 Chromosome and associated proteins [BR:
msyl03036
]
126625983
Protein phosphatases and associated proteins [BR:
msyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
126625983
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
126625983
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
126625983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
CLASP_N
Adaptin_N
RTP1_C1
Cnd1
TAF6_C
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
126625983
NCBI-ProteinID:
XP_050151077
LinkDB
All DBs
Position
6:complement(33013472..33017796)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMVDETLYPIAVLIDELKNEDIKLRLNSIRRISTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVDHANVLLPPLETLCTVEETCVRDKAVDSLCKIGGQMREK
DLVEYFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPETLKTELRTTYSQLCQDDMPMVR
RSAATNLGKFAGTVEDVHLKADIMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQECVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEATRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQQILPFVKDLSTDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGSLCMQWLNDKVYSIRDAAANNVKRLAEEFGPEWAMQHIVPQV
LEMISNPHYLYRMTILHAISLLAPVLGSEITCSKLLPVVVTASKDRVPNIKFNVAKVLQS
IIPIVDQSVVEKTIRPCLVELSEDPDVDVRSFASQALQSSEQVMMTS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatggttgatgaaaccttgtacccgatcgcggttttaatcgatgagctgaagaac
gaagacattaagctccgtttgaactcaatccggaggatttccacgattgcccgtgcactc
ggagaagagaggaccaggaaggaactgattcctttcctcagcgagaacaacgatgacgat
gatgaagtgctgctggcaatggcggaagagttgggggtgtttatcccctatgtgggtggt
gtggatcatgccaacgttctgctcccgcctttggaaacgctctgcactgttgaggaaaca
tgtgtgagggacaaagcggtggattcgttgtgtaaaattggcgggcagatgagagaaaag
gacttggttgaatatttcattcctttggttaagagacttgctgccggagaatggtttaca
gcccgagtttcatcctgcggtttgtttcatattgcttatcctagtgccccagaaacttta
aaaacggaactacggacgacatacagtcaactgtgccaagatgacatgcccatggttagg
agatctgctgcaactaacctgggaaaatttgctgggactgtagaagacgtgcacctcaag
gctgacataatgtctatatttgaggatttgacacaggatgatcaggattctgttcggtta
ttggctgttgagggttgtgcagctcttgggaagttgttggaacctcaagaatgtgtggcc
catattcttcctgtcattgttaacttttcacaggataagtcttggcgtgttcggtacatg
gttgcgaatcaattatatgagctgtgtgaagctgttggtccagaagctacaaggtcggac
ctggtgcctgcatatgttcggcttcttcgggataatgaggctgaagtacgaatagctgct
gcaggaaaagtaactaagttttgccgaattttgaatccagaacttgccattcagcagatc
cttccttttgtaaaggacttgtcaacagattcttcccagcacgttcgttctgcattggca
tcagtaataatgggaatggcaccagttttaggaaaggatgcaaccatagagcagctgctg
cctatttttctctctcttctaaaagacgagttccctgatgtgcgattgaatattatcagc
aagcttgatcaagtcaaccaggtgattgggattgatctgctgtcccagtctttgttgccg
gcaattgttgaacttgcagaggatagacattggagggttcggcttgcgataatagaatat
attcctttattggcaagtcagttgggtgtcgggttttttgatgataagcttgggtctctt
tgcatgcagtggttaaatgataaggtttactcaatacgtgatgcagctgctaataatgtg
aagcgccttgcagaagaatttggccctgaatgggcaatgcagcatatagtcccacaggtt
ttggaaatgattagcaacccccactatttgtatcggatgacaattctacatgcaatttcc
ctacttgcccctgttttgggatcagaaatcacttgttccaagcttctaccggtggtagtc
actgcatcaaaagatagggtaccaaacatcaagttcaatgtggctaaggtgttgcagtca
attattccgatagttgatcagtcggtggtggagaaaactattcgtccttgtttggttgag
cttagcgaggatcccgacgttgatgtaaggtcctttgctagccaagcccttcagtcaagt
gagcaggtcatgatgactagctag
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integrated database retrieval system
