Malus sylvestris (European crab apple): 126628821
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Entry
126628821 CDS
T09027
Name
(RefSeq) ABC transporter D family member 1-like isoform X1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl02010
ABC transporters
msyl04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126628821
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
126628821
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msyl02000
]
126628821
Enzymes [BR:
msyl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
126628821
Transporters [BR:
msyl02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
126628821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
AAA_16
SMC_N
nSTAND1
Motif
Other DBs
NCBI-GeneID:
126628821
NCBI-ProteinID:
XP_050154616
LinkDB
All DBs
Position
7:6264657..6278773
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AA seq
1340 aa
AA seq
DB search
MPSLQLLQLTEHGRNFMASRRKTLLLATGIVVAGGTAAYVQSRLNHKKHAFHGHYNGLND
SEETTEKALLNDHKLKKPPRKKGGLKSLHVLAAILLSEMGQMGVRDLLSLLSIVVLRAAL
SNRLAKVQGFLFRAAFLRRAPLFFRLISENILLCFLVSTMHSTSKYITGTLSLRFRKILT
KLIHSHYFENIAYYKMSHVDGRITNPEQRIASDVPKFCSELSEIVQDDLTAVTDGVLYTW
RLCSYASPKYVFWILAYVLGAGAMIRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESV
AFYGGENREESHIKKKFETLIGHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFS
GHLRPDTSTLGRAEMLSNLRYHTSVIISLFQSLGTLSISSRKLNRLSGYADRIHELLAIS
RELSVANSKSSGTRNCFSQADYIEFAGVKVVTPTGNVLVDNLSLRVESGSNLLITGPNGS
GKSSLFRVLGGLWPLVSGHIVKPGVGTDLNKEIFYVPQRPYTAVGTLRDQLIYPLTADEE
VEPLTRSGMVELLRNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAIL
DECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWSVQVKREDS
SLLNEGGRNMMLSESNRLSDAMTVQRAFTTIKMDSTISNLKAQSYVGEVIAVSPSKDQCA
IVPFVPQLQRPPRALPVRIAAMFKVLIPTVLDKQGAQLLAVALLVVSRTWISDRIASLNG
TTVKFVLEQDKAAFIRLIGISVLQSAASSFIAPSLRHLTARLALGWRIRLTQHLLKNYLR
NNAFYKVFHMSSKKIDADQRITQDLEKLTSDLSGLVTGMVKPSVDILWFTWRMKLLTGRR
GVAILYAYMLLGLGFLRAVTPEFGDLVSQEQQLEGTFRFMHERLRAHAESVAFFGGGSRE
KAMVESKFKELLDHSSSLLKKKWLFGILDDFTTKQLPHNVTWGLSLLYAMEHKGDRALIS
TQGELAHALRFLASVVSQSFLAFGDILELHRKFLELSGGINRIFELEELLDVAQSVVGYS
GASETVTLSPSKGRDFHSEDAITFSEVNIITPSQKMLARKLTCDIVPGKSLLVTGPNGSG
KSSVFRVLRGLWPITSGRISQPSQHVKEDIGSGCGVFYVPQRPYTCLGTLRDQIIYPLSC
EEAELRALKLYREGEEISDNTNILDMRLRTILENVRLSYLLGREEGGWDANLNWEDTLSL
GEQQRLGMARLFFHKPKFAILDECTNATSVDVEEQLYRLAKDMNITVVTSSQRPALIPFH
SLELRFIDGEGNWELRSIKQ
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgcttcagctgctgcaattgactgagcatggccgcaatttcatggcgtcgagg
aggaaaactttactacttgccactggtatcgtagttgctggggggacggctgcatacgtt
caatcgcgactaaaccataaaaaacatgcttttcatggtcattacaatgggcttaatgat
agtgaagaaacaacggagaaggccttgttgaacgatcacaagttaaagaaacctccacgt
aagaaagggggattgaagtctcttcatgtccttgctgcaattctcttatctgagatgggg
caaatgggtgtgagggatcttttatctttactctccatagtggtgttgcgagctgctttg
agcaacagactagcaaaagtccaaggatttctattccgtgcagctttccttcgacgtgcg
ccgttattttttcggttgatttctgaaaatattttattatgttttcttgtatcaaccatg
cattctacttcaaagtacatcacaggaaccttaagtctgcggttcagaaaaatattgaca
aaacttatccattcccattattttgagaatattgcgtactacaaaatgtctcatgttgat
ggtcgcataacaaatcctgaacagcgaattgcaagtgatgtgccaaagttctgttcagag
ttgagtgaaattgtacaggatgatttgacagctgtcactgatggtgtactttatacttgg
cggttatgttcatatgccagtccaaaatatgtcttctggatattggcatatgtattaggg
gctggggccatgataagaaatttttctcctgcttttgggaaactaatgtccaaagaacag
caattggaaggggagtaccggcagcttcattctcgattaaggacccatgcagaaagtgtg
gcattttatggtggggagaatagagaagaatctcatattaagaagaagtttgagacactg
attgggcatatgcgtgttgtccttcatgaccattggtggtttggcatgattcaagatttt
ctattgaagtatcttggtgctacagttgctgttatactgattattgagcctttcttttcg
ggacatctgaggcccgacacttcaactttaggccgtgcagagatgttaagcaatttaaga
tatcatactagtgtcataatctcactatttcagtctttgggaactctttcgataagttca
agaaaactaaatcggctcagtggttacgcggatcgcattcatgaattattggccatatca
agagagttaagtgtggctaatagtaaatcttctgggacgagaaattgctttagtcaagct
gattacattgaatttgcaggtgtcaaggttgtcacgcccacgggtaatgttttggtggat
aatttgtcacttagggtcgaatcaggatctaatcttttgattacaggtccaaatggtagt
gggaagagctcacttttccgagttctaggagggctctggcccttggtatctggccatatt
gtgaaacctggtgttggaactgatctcaataaagaaattttctatgtaccacaaagaccg
tacacagctgttggaacactacgggatcagttgatttatcctcttactgcggatgaagag
gttgaaccactcacacgcagtggaatggtggagttattgagaaatgttgaccttgagtat
ttattagaccggtatccacccgagaaagagataaattggggtgatgaattatctctcggg
gagcaacaaagactggggatggctagacttttttatcataagcctaaatttgcaattctt
gatgagtgcacgagtgctgtcacaactgacatggaggaacgtttttgtgctaaagttcga
gcaatgggaacatcatgcattactatctcccatcgtccagcactagttgcatttcatgat
gtggtgttgtccttggatggtgaaggtggttggagtgttcaggtcaaaagggaggattct
tctctccttaatgaaggtgggagaaacatgatgttgtctgagtcaaacaggctgagtgat
gcaatgacagttcaacgtgcattcaccacgattaaaatggattccacaatctcaaatttg
aaggcacaatcatacgttggtgaggtgatagcagtgtctccttctaaggatcagtgtgcc
atagttccatttgttccacagctccaaaggccacctcgagctttgccagtgagaatagca
gctatgttcaaagtactgatccccacagtccttgataaacaaggagcacaactgcttgca
gttgctcttctcgtggtatcgagaacatggatttcagatcgtattgcttcattaaatgga
accactgtgaaatttgtattagagcaggataaggcagcctttattcgtctaattggcatt
agtgtgcttcagagtgctgcatcgtccttcattgcaccttctttaaggcacttgacagcc
aggctggctcttgggtggaggatccgtttaactcaacatttactcaagaactacttgaga
aataatgcattttacaaggtcttccacatgtcaagtaagaagatagatgcagatcagaga
attactcaggacctagaaaagttaacctctgacttgtcgggactggttacaggaatggtc
aagccatctgtggacattctctggttcacctggagaatgaagcttttgacggggcggagg
ggagttgctatattatatgcttatatgttactgggtctaggttttctgagggctgttacc
cctgaatttggtgatctagtgagtcaagaacaacaacttgaaggaacgttcaggtttatg
catgaaagattgcgtgctcatgccgagtctgttgctttctttggaggtggttctagagaa
aaagctatggttgaatctaagttcaaggagcttcttgatcactcctcgtctcttttgaag
aagaagtggttgtttggtattctggatgattttaccacaaaacaacttccacataatgtg
acgtgggggctgagcttgttatatgccatggaacacaagggagaccgagcattgatatcc
actcaaggtgagctggcacatgcattgcgtttcttagcatctgttgtatctcaaagcttt
ttagctttcggcgacattctggaattgcataggaagttccttgaactgtctggcggcatc
aacagaatttttgagcttgaagagcttctagatgttgcacaatctgttgttggttattca
ggggcttccgaaactgttactctgtcaccatctaaggggagagattttcattctgaagat
gccattaccttctctgaagttaatattatcaccccatcacagaaaatgttggccaggaag
ttaacatgtgatatagtacctgggaaaagcttgcttgttactggtccaaatgggagtggt
aaaagttctgtctttagagttcttagaggtctttggcccatcacgagtggaagaatctct
caaccgtcgcaacatgttaaggaagatattggttctggttgtggagtgttttatgttcct
cagcgaccgtatacatgtttgggaacactcagggatcaaattatctatcctctatcttgt
gaggaggctgagttaagggcattgaagttgtatcgagaaggtgaagaaatttctgacaac
accaatattctagacatgcgtttaagaactattctggagaatgttcgattgagttatctt
ttgggaagagaggaaggtggttgggatgcgaatctgaattgggaggacacgctctctctt
ggggaacagcagagattgggcatggcacgcttatttttccacaagcctaaatttgcgatc
cttgatgaatgcaccaatgctacgagcgttgatgtcgaagaacaactttatcggctcgcg
aaagacatgaatatcacagttgttacctcctcacaacgtcctgctctaataccattccat
tccctggaattacggttcattgatggtgagggtaactgggaacttcgttcaataaagcaa
tga
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