Malus sylvestris (European crab apple): 126634361
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Entry
126634361 CDS
T09027
Name
(RefSeq) beta-galactosidase 17
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00052
Galactose metabolism
msyl00511
Other glycan degradation
msyl00531
Glycosaminoglycan degradation
msyl00600
Sphingolipid metabolism
msyl00604
Glycosphingolipid biosynthesis - ganglio series
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
126634361
09103 Lipid metabolism
00600 Sphingolipid metabolism
126634361
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
126634361
00604 Glycosphingolipid biosynthesis - ganglio series
126634361
00511 Other glycan degradation
126634361
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126634361
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
126634361
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126634361
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
126634361
NCBI-ProteinID:
XP_050160826
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Position
9:16903918..16909796
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AA seq
697 aa
AA seq
DB search
MVRRRSTTLTWFFLIFLSLIAFGIFVPVFALLPPLSSHSPHQLQHHPSSKRNQDHARKFE
ISEDKFWKDGQPFQIIGGDLHYFRVLPEYWEDRLLRAKALGLNTIQTYVPWNLHEPRAGI
LDFDGITDLVAFLKLSQKLGILVMLRPGPYICAEWDLGGFPPWLLSINPAPRLRSSDPTF
LRLVDTWWGILLPKVAPLLYGSGGPVIMVQIENEFGSYGDDNAYLHHLVSVARKHLGEDA
ILYTTDGGSRETLEKGTIRGDAVFSAVDFTTGDDPWPIFELQKEFNAPGKSPPLSSEFYT
GWLTHWGEKNAQTDAAFTAAALKKILERNGSAVLYMAHGGTNFGFYNGANTGSDESDYKP
DLTSYDYDAPIRESGDVNNAKFKAIRRVVEQHSLGSIPAVPADNEKKAYGSIHVTKTGTL
FDMIHYFDVVESESPISMESAGQMFGFMLYVTEYAAKDNGGGVVSIPKVHDRAQVFVMCS
SEDGHGRPKYVGTFERWSNQPLTLPNTKCHSNISLFVLVENMGRLNYGPYIFDRKGILSP
VYLDGRILRRWKMHLIPIGNLNEVPKINPIIQASHSGVITMSARKRLKPKKSGNDSNVPA
FYAGYISISKEDEIKDTFISLSGWGKGIVTINNFNIGRFWPLKGPQCNLYVPAPVLHRGN
NVVVIFELESPNPELVVRFVDQPDFTCGQGKSNVHQL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaggagaagcacgacgctcacctggtttttcctcatctttctctctctaata
gcctttggcatctttgtccctgtctttgctcttctacctcctctttcttcccactctccc
caccaactgcagcaccatcccagctccaaaaggaatcaggatcatgccagaaagtttgaa
atttcagaggacaagttctggaaagatggtcagcctttccagatcattgggggtgacttg
cattatttccgggttcttcctgagtactgggaagataggttgttgagagcaaaggcattg
ggattaaatacgattcaaacttatgttccctggaacctacatgaaccaagagctggtatt
ttggattttgacggtattactgatttggttgcatttctcaaactctcccagaagctgggt
attcttgtaatgcttcgacctggaccatatatatgtgcagagtgggatttgggaggtttc
cctccttggttactttccatcaatccagctcccagactacgatcatcagatcccactttc
cttcggttggttgatacatggtggggaatcctgcttccaaaggtagctccccttctttat
ggaagtggaggtcctgttataatggttcagattgaaaatgaatttggatcatatggggac
gacaatgcttatcttcaccacttggtgtcagtggctagaaagcaccttggggaagatgca
attttgtatactacggatggaggttctagggaaacacttgagaaaggaacaattcgtgga
gatgctgtcttttcagctgttgacttcactactggtgatgatccttggcctatatttgag
ttgcaaaaggagttcaatgcccctgggaaatcaccaccactttcttcagagttttacaca
ggctggcttacacattggggagagaagaatgcgcagactgatgctgcttttacagcagct
gccttgaaaaagattttggaaagaaatggttctgcagtgctttatatggcacatggggga
acaaactttgggttttataatggagcaaatactggttcagacgagtctgattacaagccc
gacctcacttcctatgattatgatgcaccgatcagggaatctggggatgtaaacaatgca
aaattcaaagcaattaggagggtcgtagagcaacacagtttaggatctatccctgcagtt
ccagccgataatgagaagaaagcatatggatccattcacgtaactaaaacagggacttta
tttgatatgatccactactttgatgtggttgaatccgagagcccaatatctatggagtca
gcgggacagatgttcggatttatgttatacgtgactgagtatgctgcaaaagacaatggt
ggcggagttgtatccataccaaaggtgcacgacagagcccaagtttttgtaatgtgctct
tctgaagatggtcatggaagaccaaaatatgttggcacttttgaaagatggtcaaatcaa
cctctaacccttcctaatacgaaatgtcactctaacatcagcttatttgtgttggttgaa
aacatgggccgtctaaattatggaccatatatctttgacaggaagggtattctatctcct
gtttatcttgacgggagaattctccgaagatggaaaatgcatttgatacctataggaaac
ctgaatgaggttcctaaaatcaatcccataattcaggcttcacattctggagtcattact
atgtcagcacgcaaaagattaaaaccgaaaaagtctgggaatgattcgaacgtgccagca
ttctatgctggatatatttctatcagcaaagaggacgaaatcaaagatacattcatatca
ttgagtggctgggggaaagggatagtaactattaacaatttcaacatcggaagattttgg
ccgttaaagggaccgcagtgtaacctctatgttcccgctcctgtccttcatcgtgggaat
aatgttgtggtcatatttgagttagagtccccaaacccggagcttgtggtacgctttgtt
gatcagccagacttcacttgtggtcaagggaaatcgaatgtgcatcagctttag
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