Methanosarcina siciliae HI350: MSSIH_0014
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Entry
MSSIH_0014 CDS
T03864
Name
(GenBank) RNA ligase, family
KO
K07468
DNA/RNA ligase [EC:6.5.1.-]
Organism
msz
Methanosarcina siciliae HI350
Brite
KEGG Orthology (KO) [BR:
msz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
MSSIH_0014
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Motif
Pfam:
Lig_C
RNA_ligase
DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID:
AKB30704
UniProt:
A0A0E3P9M9
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Position
complement(17624..18796)
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AA seq
390 aa
AA seq
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MHKEENGEIDPDFINRLAGFLGFEEERVRHLFEKKYLARNWGKHEHMLRFDKEISHIEHG
TVLYEKGSSFEIIMGFPKIRRAMVLDPTLKKHFNGLSKLTVEEKMNGYNVRVAQVDGEIL
AITRSGYICPYTTERANAKLNLEFFDAFPELVLYGEMVGPDNPYVPKTIYDVESVEFFIF
DIREKNTGKPLPTAKRRETMEKYGFFQVRSFGEIPLETAPEEIANIIRELGKTEHEGVVI
KDPEMVLPSLKYTSSQSNCSDLRHAFKFYNEAGRDYMLSRIVREGFQTVEWDEDETEFKK
RCIQLGESILNPLRESIRSVKDGERLYEEVRIRVRDLKTATEFENYLKRLGVDTIFEAPQ
PAGNEYLVNIKKINKSTNDKTQAIWEGELW
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaagaggagaatggggaaatagaccctgactttataaaccggctggcgggtttc
ctgggctttgaggaagagagagtccggcacctttttgaaaagaagtaccttgcccggaac
tggggcaaacatgagcatatgctccgtttcgataaggaaatttcccatatagagcacggg
accgtactttatgaaaaaggcagctcttttgaaattatcatgggcttcccgaagattcgg
agagccatggtccttgaccccacgcttaaaaaacacttcaacggcctcagtaaactgact
gtagaagaaaaaatgaacgggtacaatgtccgggtagcgcaggtcgacggagagatcctt
gcaatcacccggagcggatatatctgcccctacacaacagaaagggcaaatgcaaaactt
aacctggagttctttgacgcttttccggaacttgttctctacggtgaaatggtaggccct
gacaacccatatgtcccgaagacaatctatgacgtcgagtccgtggagtttttcatcttc
gatatccgggagaaaaacacaggcaaacccctaccaacggcaaaaaggcgggagacgatg
gaaaaatatggctttttccaggtacgatcctttggggaaattcccctggaaacagccccc
gaagaaatcgcaaacatcatccgggaactggggaaaaccgagcatgaaggcgtggtcatc
aaagacccggaaatggtcctgccctctcttaagtacacctcctcccagagcaactgctcc
gacctcaggcacgccttcaagttttacaacgaagccggaagggattatatgctctcccgc
atagtccgggaaggttttcagactgtggaatgggacgaagacgaaaccgagttcaagaaa
cgctgtatacagcttggagaaagcatcctgaaccctctaagagaatcaataagaagtgta
aaggacggagaaagactctacgaagaggtcaggatcagggtaagggacctgaaaaccgcg
acagaatttgagaattacctcaaaagacttggggtagatacaatctttgaagccccacaa
ccggcaggaaacgagtatctggtaaacatcaagaaaatcaataaaagcaccaatgataaa
actcaggcgatctgggaaggagaactctggtga
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