Methanosarcina siciliae HI350: MSSIH_3858
Help
Entry
MSSIH_3858 CDS
T03864
Name
(GenBank) Archaeal DNA polymerase II small subunit
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
msz
Methanosarcina siciliae HI350
Pathway
msz03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
msz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSSIH_3858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msz03032
]
MSSIH_3858
Enzymes [BR:
msz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSSIH_3858
DNA replication proteins [BR:
msz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
MSSIH_3858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AKB34548
UniProt:
A0A0E3PIV0
LinkDB
All DBs
Position
4881180..4883150
Genome browser
AA seq
656 aa
AA seq
DB search
MNEIDIIRAVIEEGYQISPQAVELIKLSNSPENLLKYILSTIDDCVFVIEPEHVDLKSFE
ASTTFSRVTSGAPPGTVSGKVSGKISTPALDSASEPVSDSGYESSSEPSVEPDIVSAVEV
SDSNPEIEPEILSSQGSNSDFDSDPVYDSASDLVHDLAKDPIHDSVSAPVNNSVHDSVHG
SFSNPVSPSVSPKSIEKQASSFFGITGPSSTSKNALKANFLFSNQRNSLSSSSRDEGVRY
IPGRNPVTVLSDITGHSTCVGEYMQFVQYFRDRYSRLSEILRGRMNARPVESLKRRSFRR
GSDGNTEELSIIGMVSDISTTTNGHKILSLEDSTGSFSVLIRNSDKELFELASRLLLDEV
VGVTGSVTNDGNLMLATKLLQPDVPNSVQRRTGSHGKAVLISDVHVGSSQFLEDSWLDFL
DFLKGESDSEEMREIAAQIRYLVVAGDLVDGIGIYPDQEMELDIPDVYEQYRKAAEYIRE
VPEQIHVIISPGNHDAVRQAEPQPALPARICADFPENVTFVGNPALVDLDGVQILIYHGR
SIDDLVASVPGVSYQEPAGAVLEMLKRRHLAPTYGSRVSISPEKKDYFIIDPVPDIIHTG
HVHTLGVQRYKNVLLVNSGTWQGQTEFQKRVNLMPMPARVPVVDLANFDVKILAFD
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatcgatattataagggcagttatagaggaagggtaccagataagcccgcaa
gccgtagaactaatcaaattaagtaactcccctgaaaaccttctaaaatacattctttca
actattgatgactgtgttttcgttatcgaacccgaacatgtcgacctgaagagctttgaa
gcttctacaactttttccagagtgacctctggagcacctcccgggacagtttccggtaag
gtttcaggtaaaatttccactcctgccttagattctgcttcagaacctgtctcagattct
ggctacgaatcttcctcagaaccttccgttgaaccggatatagtttcagcagttgaagtc
tcggactccaacccggaaattgaacctgaaattctttcttcccagggttcgaattcagat
tttgattctgatccggtttacgattctgcttctgatttagttcatgatttagctaaggat
ccaattcatgattctgtttctgccccggttaataattcagttcatgattcagttcatggt
tctttttccaatcctgttagtccttctgtttctccaaaaagtatagaaaaacaggcttcc
tcttttttcggaattacaggcccttcttctacctctaaaaatgctttaaaggctaatttt
cttttttcaaaccagagaaattctctttcttcgagttccagggacgaaggggtccgatat
attccgggccgcaaccctgttactgtgctttccgacattacagggcattcgacctgtgtt
ggagagtatatgcagtttgtgcagtatttcagggacaggtacagcaggctctctgagatc
ctccggggcagaatgaatgcccggcctgtagagagtctgaaaaggaggagtttccgccga
gggtccgacgggaacactgaggagttatcgatcatagggatggtttcagatatcagcacc
accaccaatgggcataagatcctttctcttgaagactcaacgggctctttttccgtgctt
atccgaaatagtgataaagagctctttgagctagcttcgcggctccttctggacgaggtt
gtcggggtaacaggctcggttacgaacgacggaaaccttatgcttgccacaaaactcctc
cagcccgatgtccctaacagtgttcagcgcaggacaggaagccacggaaaagccgtcctg
atctcggatgtgcatgtgggcagttcccagttcctggaagattcctggctggacttcctg
gactttttgaaaggagaatccgactccgaagaaatgcgggagattgcagcccagatccgt
tatctcgttgttgcaggcgacctggtggacggcatagggatttatcctgaccaggaaatg
gaactggatatcccggatgtctatgaacagtacaggaaagccgcagagtatataagagaa
gttcctgaacaaatccatgtgatcataagtcccggaaaccatgacgctgtacgccaggca
gaaccacagcccgccctgcctgcgcgaatctgtgcggattttcctgagaacgtcaccttc
gtaggcaaccctgctcttgtggaccttgacggcgtccagattcttatatatcacggcaga
tcgattgatgatctggtggcgagtgttcccggggtatcatatcaggaacctgcaggggca
gtccttgagatgctcaagcgcaggcaccttgctccgacttacgggagtagggtttccata
tccccggagaaaaaagactactttataattgaccctgttccggatatcatccatacgggg
cacgtccatactctgggggttcagcgatacaaaaatgtcctgctggtcaactccggaaca
tggcagggtcagaccgagttccagaagcgtgtaaacctgatgcctatgccggctagagtc
ccggttgtggatcttgcgaattttgacgtgaaaatcctggcatttgattaa
DBGET
integrated database retrieval system
