Methanosarcina thermophila TM-1: MSTHT_0999
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Entry
MSTHT_0999 CDS
T03892
Name
(GenBank) DNA-directed RNA polymerase subunit B''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
mthr
Methanosarcina thermophila TM-1
Pathway
mthr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mthr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSTHT_0999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mthr03021
]
MSTHT_0999
Enzymes [BR:
mthr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSTHT_0999
Transcription machinery [BR:
mthr03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSTHT_0999
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-ProteinID:
AKB12757
UniProt:
A0A0E3NBR7
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All DBs
Position
1245719..1247314
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AA seq
531 aa
AA seq
DB search
MQHHIDSFNKFIDYGLQKIIDEQRIIETDIEDTYLKLGKIRVEHPVVKEADGAIEKLYPN
EARLRNLSYSGPLYLEMSVVKDGVESEVMEAKIGQLPIMVKSKVCNLPGLSESEKIRYGE
DPLDPGGYFIIGGTERVVMTLEDLAPNKILVEYGERYGDTIEVAKVFSQRRGYRALVIVE
RGRKSLLEVSFPSISGRVYFVTLMRALGIVTDEDIVNAVSSDPEIIKFMLENLEEAEVET
QEEAIEKIGARVAAGQAKEYQIKRANYVIDRYLFPHLGNDIRDRISKAHFLARMAESCFE
LALGKRAEDDKDHYANKRLKLAGDLMEDLFRVSFNRLARDIKYQLERANMRKRELNVATI
VRADVLTDRLQHPLATGNWVGGRTGVSQLLDRNDYISTLSHLRRVISPLSRAQPHFEARD
LHATQWGRLCPSETPEGPNCGLVKNFAEMVELSTGIEDTDSLKKILYDLNVEPVVVKVPE
LPPKLKETLLDEFGEEIIEEFEEPSEIETKYKDDEFYDYSDMDDLGSMYDD
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcatcatatagactcatttaataagtttatagattacgggctgcaaaagatcata
gatgaacaaagaataatagaaaccgatatcgaagacacctacctgaaactcggcaaaata
cgggtagagcatcctgtggtaaaggaagctgacggggcaattgaaaaactttatcccaat
gaggcaaggctcaggaacctctcgtactcaggccctctttatcttgagatgagcgtggta
aaagacggggttgaatccgaggtaatggaggcaaaaatagggcagcttccgatcatggtc
aaatccaaggtctgtaaccttccaggacttagcgaaagcgaaaaaatccgctatggggaa
gatcctcttgacccagggggatacttcattatcggcggtaccgaaagagtggttatgacc
cttgaggacctcgctcctaataagattcttgtagagtatggtgaaaggtacggcgacact
atagaggttgcaaaagttttctcccagagacgcggatacagggcactcgtaattgtggaa
aggggaagaaaatccttgcttgaggtttctttcccttctatctcaggcagggtatatttt
gttacccttatgagagcgcttgggatagtaactgacgaagatatcgtaaatgctgtttcg
agtgatcccgaaattatcaagtttatgctggagaacctggaagaagccgaagtcgaaacc
caggaggaagcaatcgaaaaaataggagcaagggttgctgcaggccaagcaaaggaatac
cagataaaaagggcaaattacgttattgacaggtacctgttcccgcatcttgggaacgat
ataagggaccggatctccaaagctcacttcctggcaagaatggctgaatcctgttttgag
ctggcacttggcaagcgtgcggaagacgacaaagaccactatgcaaacaaaagattaaaa
ctcgcaggtgatctgatggaagatcttttcagagtatctttcaacagacttgcaagagac
ataaagtaccagctagagcgcgcaaacatgaggaaaagagaactcaacgtcgccacaata
gtaagggcagatgtgctcactgaccgcctgcaacatcctcttgcaaccggaaactgggtt
ggaggaagaacaggtgtatcccagctccttgataggaacgactatatctcaacgctctcc
cacctgcgccgtgtaatatctccgctttcacgtgcccagcctcacttcgaggcaagagac
cttcacgcaacccagtgggggaggctctgtccctcggaaactcctgaaggcccgaactgt
ggactggtgaaaaactttgccgaaatggttgagctttcaacaggaatagaggataccgat
agcttgaagaaaatactctacgacctgaatgtcgagcctgtggttgtaaaagtacccgaa
cttccacccaaactgaaggaaaccctgcttgacgagttcggagaagagattatagaagag
tttgaagagccttcagaaattgaaaccaaatataaagatgatgaattctacgattattca
gatatggatgatctcggatctatgtacgatgattga
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