KEGG   Massilia oculi: DIR46_04955
Entry
DIR46_04955       CDS       T05448                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
mtim  Massilia oculi
Pathway
mtim00740  Riboflavin metabolism
mtim01100  Metabolic pathways
mtim01110  Biosynthesis of secondary metabolites
mtim01240  Biosynthesis of cofactors
mtim02024  Quorum sensing
Module
mtim_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:mtim00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    DIR46_04955 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DIR46_04955 (ribD)
Enzymes [BR:mtim01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     DIR46_04955 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     DIR46_04955 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AWL07625
UniProt: A0A2S2DQH0
LinkDB
Position
complement(1063225..1064361)
AA seq 378 aa
MATKEMANGYSELILNDTDGMALALAWAARGMYITAPNPRIGCVIVKDGIVIGAGHTQPA
GQAHAEIQALRDAAARGNDVRGATAYVTLEPCSHHGRTPPCSDALVQAGLGRVVAAMVDP
NPLVAGRGLAQLEAAGIEVKAGVLAEAAQELNVGFFSRMVRGLPWVRLKVAASLDGATAL
AGGESQWITGEQARADGHAWRARASAIVTGIGTVKSDDPQLTVRGVDTPLQPRRVIVDSR
LEIDLGARILQGEPCWIVAAVGNTEKAAALTAAGHEVLMLPNARGKVDLPALMRELGRRE
INEVHVEAGSRLNASMVREGCVDELLAYLAPSLIGPGQGMFDLPALERLADRRQLRFHDV
ARVGDDLRILARFVEPAA
NT seq 1137 nt   +upstreamnt  +downstreamnt
atggcgaccaaagagatggcgaacggctacagcgaactgatcctgaacgataccgacggc
atggccctggccctggcctgggcggcgcgcggcatgtacatcaccgcgcctaatccgcgc
atcggttgcgtgatcgtcaaggacggcatcgtgatcggcgccggccacacccagcccgcc
ggccaggcgcacgccgagatccaggcgctgcgcgacgccgcggcgcgcggcaacgacgtg
cgcggcgccaccgcctacgtgacgctggaaccgtgcagccaccacggccgcacgccgcca
tgttcggacgccctggtgcaggccggcctgggaagagttgtggcggcgatggtcgacccg
aatccgctggtagccggccgtggcctggctcagctcgaggcggccggcatcgaggtcaag
gccggcgtgctggccgaggcggcgcaggagctgaacgtcggcttcttctcgcgcatggtg
cgcggcctgccgtgggtgcgactgaaagtcgcggccagcctggatggcgccacggcgctg
gccggcggcgagagccagtggatcacgggcgaacaggcgcgcgccgacggccacgcctgg
cgcgcgcgcgccagcgcgatcgtcaccggcatcggcaccgtcaagtccgatgatccgcag
ttgacggtgcgcggcgtcgacacgccgctgcaaccgcgccgcgtaatcgtcgacagccgc
ctcgagatcgacctgggcgcccgcatcctgcagggcgaaccatgctggatcgtggccgcc
gtcgggaacacggaaaaagccgccgccctgacggccgccggccatgaggtcttgatgctg
ccgaatgcgcgcggcaaggtcgacctgccggccctgatgcgcgagctgggccggcgcgaa
atcaatgaagtgcacgtcgaggcgggctccaggctgaacgcctcgatggtgcgcgaaggc
tgcgtcgacgagctgctggcctacctggcgccgagcctcatcggaccggggcagggcatg
ttcgacctgcccgcgctcgagcgcctggcggaccgccgccagctgcgctttcacgacgtg
gcgcgcgtgggcgacgacctgcgcatcctggcccgcttcgtcgagccggccgcctga

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