Thermothelomyces thermophilus: MYCTH_2295109
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Entry
MYCTH_2295109 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MYCTH_2295109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtm03021
]
MYCTH_2295109
Enzymes [BR:
mtm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MYCTH_2295109
Transcription machinery [BR:
mtm03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
MYCTH_2295109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
11508164
NCBI-ProteinID:
XP_003658828
JGI:
2295109
UniProt:
G2Q3M7
LinkDB
All DBs
Position
1:complement(join(2143740..2146973,2147039..2147509))
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AA seq
1234 aa
AA seq
DB search
MAPEPTNTSWDHEYHTIRREKLFRNPPTDRTAYPALQLAVDPHIESFNALFRTDGRPSLL
DHALAEIGTKTFLDGDERAAPAGRNKLTIRYKSVTLQKSQVPPSNKFAKRREIFPAECRE
RHVSYRGKLTAVFEYRINDGEPQEFVRELGQMPIMVKSNKCHLENNPPALLVQRKEESEE
LGGYFIINGIEKIIRLLLVNRRNFPLAIIRPSFANRGSSYTQYGIIVRSVRPDETSQTNV
LHYLNDGNVTFRFSWRKNEYLVPVMMILKALIETNDREIFEGLVGPPNSKGIENTFLTDR
VELLLRTYKSYGLYTKTQTRAYLGQKFRVVLGVPDTMSDYEVGTEFLRKVVLVHLGCVDV
TEEQDLDKFKMLLFMCRKLYALVAGDCAVDNPDAVQNQEILLGGFLYGMILKERLDELLS
VSLKAALRDYLRRNPTLSFTSSSFAKDFPISIFRRTNENLGNALEYFLSTGNLQSPSGLD
LQQTSGFTVVAEKLNFLRFISHFRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGA
PCGLLNHLAHKCKIMTESVDVSAVPGVAMELGVNDYSSAATSESVVVMLDGRIIGWCTPK
AAKAVADTLRRWKVEGGHGIPVLLEIGYVPPSRGGSYPGIYMASQPSRMVRPVKYLPLGK
EDFVGPHEQPYMSIACTEEEVIPGDSTHVEFDPTNILSILANMTPFSDFNQSPRNMYQCQ
MGKQSMGTPGAAIRYRTDNKMYRLQTGQTPIVRAPLHNTYGFDNFPNGMNAVVAVISYTG
YDMDDAMILNKSAHERGFGHGTIYKTKKISLKDDTRTRTSKTITRMFGFAPGSPVRASDR
EMLDEDGLPYVGRLVREGDILCAWHTVSADYSGQLINRDGITHWERYKEAEDAFIEEVRV
IGSDSGNEPLQTISIKLRIPRSPVIGDKFSSRHGQKGVASQKWPAIDMPFSESGIQPDVI
INPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFKFNEEHTAADYFGQQLIKAGYNYH
GNEPMYSGITGEEFACDIYIGVVYYQRLRHMVNDKYQVRTTGPVVPTTGQPIKGRKKGGG
IRVGEMERDALLAHGTAFLLQDRLLNCSDYTKAWICRDCGSFLSVQPTVSPFIGKRRQVG
TVRCRNCAQRLDQIEGLDLMKLDGEIWEDGQGVQWIGGENTTMVVVPGALKFLDVELAAL
GVKMKFRVDTKDAIRRGPLRATAPKTLPSVAASA
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgagcctaccaacacatcgtgggatcacgagtaccacaccattcgtcgcgag
aagctttttcgaaatcccccgaccgacaggactgcctatcctgccctccagctcgctgtt
gatccccatatcgagtcgtttaatgccctctttcgcaccgacgggaggcccagccttctc
gaccatgcgctcgccgagatcgggacgaagacttttctagatggagatgagcgagcggcg
cccgcgggtagaaataagctgactattcggtacaagagcgtcacgcttcagaagtcccag
gttccgccctccaacaagtttgcaaagaggcgcgagatctttccagccgagtgtagagaa
cgacacgtctcgtaccgggggaagctcacggctgttttcgagtaccgcatcaacgatggc
gagcctcaggagtttgtcagagaattgggccagatgcccatcatggtcaagtccaataaa
tgccaccttgaaaacaatccgccggcgcttcttgtgcagagaaaagaggagtccgaggag
ctgggcggatacttcatcataaacggcattgagaagattatccgtctgctcctagtcaac
cgcaggaacttcccgctggctattatccgcccgagtttcgccaaccgcggttcttcgtat
acgcagtacggtattatagtacggtcggtccggccagacgagacctcgcaaacgaatgtg
ctccactacctgaacgacggaaacgtcacgttccggttctcatggaggaagaacgagtat
ctcgtgccggtcatgatgatcctcaaggcccttatcgagaccaacgaccgagagattttc
gagggtctggtgggcccgccaaactcgaaagggatcgagaatactttcttgacagaccga
gttgaactgctcctccgcacatataaatcatacggtctgtacaccaaaacacagacccgg
gcgtatctgggacagaagttccgggttgtgctcggtgtccccgataccatgtcggactat
gaagtaggcacagaattcctccgcaaggtggttctggtgcatcttggttgtgtcgatgtc
accgaggaacaggatctcgacaagttcaagatgttgctcttcatgtgccggaagctctac
gcccttgttgccggcgactgcgcagtcgacaaccccgacgcggtgcagaaccaggaaatc
ctgctcggcggctttctgtacggcatgatattgaaagagcggcttgatgagttgctctcc
gtctcactcaaggcggctctgcgagattatctcagacgaaacccgaccctctctttcacg
tcttcctcttttgcaaaggactttcccatttccattttcaggaggacaaacgagaatctc
ggcaatgccctcgagtatttcctctcgaccggcaatcttcagagcccctctggtctcgac
ctgcaacagacttcgggcttcaccgtggtggccgagaagctcaatttcttgcgtttcatc
agccacttccgtatggttcaccgtggcagtttcttcgctcagctgaagaccacgaccgtc
cggaagctgctgcctgagtcctggggtttcctgtgtcccgttcacacccctgatggtgcg
ccttgtggactgttgaaccacttggcccacaaatgcaagatcatgacggagtcggtggat
gtgtcggccgttccgggcgttgctatggagctgggcgtgaacgactactcgtccgccgcc
acaagcgagagtgtcgtcgtgatgctcgacggcaggattatcggctggtgtacccccaaa
gcggccaaggctgtcgctgacaccctgcggcgctggaaagtggagggcggccacggcatt
ccggtacttttggagatcggctatgtgcctccgtccaggggcgggtcgtatcctggtatc
tatatggcgtctcagccgtcgaggatggtccggccggtgaagtatttaccgctgggcaaa
gaagatttcgtcggcccgcatgagcagccgtacatgtcgattgcgtgtacagaggaagaa
gtcattccaggtgactcaacacatgtcgagttcgaccctaccaacatcctctccatcttg
gccaacatgacccccttctccgacttcaaccagtcaccccgaaacatgtaccagtgccag
atgggtaagcaatcaatgggtacaccgggagctgcaattcggtatcggacggacaacaag
atgtaccgcctccagaccggccaaacccctatcgtccgtgcccctttgcacaatacctac
ggtttcgacaacttccccaacggcatgaatgctgtggttgctgtcatctcgtacacgggc
tatgacatggacgatgccatgattctcaacaagtcggcgcacgagcgagggttcggtcac
ggcacaatctacaagaccaagaagatcagtctcaaggatgacacaaggacccggacatcc
aagaccatcaccagaatgttcggttttgctcccggcagccccgtcagggcgtcggaccgc
gaaatgctcgacgaggatgggctgccttacgtgggccgcctggttagggagggagacatt
ctctgtgcctggcacactgtctcggccgactatagcgggcagctaatcaaccgagacggc
atcacgcactgggagcgctacaaggaggcggaggacgcctttatcgaggaggtgcgcgtg
atcgggagcgactcggggaatgaacccctgcagacaatctcgatcaaactccgcatcccc
cggtcgcccgtcatcggtgacaagttctcgtcgcgtcacggtcagaagggcgtcgcgtcg
caaaaatggccggccatcgacatgcccttctccgagtcgggcatccagccggacgtcatc
atcaacccccacgctttcccgtctcgcatgacaatcggcatgtttgtcgagtcacttgct
ggcaaggccggcgctctgcacggcctggcacaggactcgacgccgttcaagttcaacgag
gagcacacggcggccgactactttggccagcagctgatcaaggcaggttacaactaccac
ggcaacgaacccatgtactcgggcattactggagaggagtttgcttgcgacatctacatc
ggtgtggtctactaccagcggctgagacacatggtcaacgacaagtaccaggtgcgcaca
acggggccggtagtcccaacgacgggccagcccatcaaaggccgcaagaagggcggcggt
atccgcgtgggcgaaatggagcgcgacgcgctgctggcgcacggcaccgcgttcttgctg
caggaccgcctgctcaactgctcggactacaccaaggcgtggatttgccgcgattgtggg
tcgtttttgtccgtgcaaccgactgtgtcgccgttcattggcaagcggaggcaggtcggc
accgtccgctgtcggaactgcgcgcagcgcctggatcagatcgaggggctggatctgatg
aagctggacggggagatctgggaggacggtcaaggggtgcagtggatcggcggggaaaac
accacaatggtggtcgtaccgggcgcgctgaagtttctggatgtggagctggcggccctg
ggcgtgaagatgaagttccgggtggacaccaaggacgcgattcggaggggccctttgagg
gcgacggcaccgaagacgctcccgagtgtggcggcttcggcatga
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integrated database retrieval system
