Methanothrix thermoacetophila: Mthe_0027
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Entry
Mthe_0027 CDS
T00417
Name
(GenBank) DNA-directed RNA polymerase, subunit B'
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
mtp
Methanothrix thermoacetophila
Pathway
mtp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mthe_0027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtp03021
]
Mthe_0027
Enzymes [BR:
mtp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mthe_0027
Transcription machinery [BR:
mtp03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Mthe_0027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-ProteinID:
ABK13830
UniProt:
A0B556
LinkDB
All DBs
Position
23826..25316
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AA seq
496 aa
AA seq
DB search
MLDRSVLYRAYFTKDKLVHHHINSFNEFIDRGLQKVIDEVRIIETNIENTYVKLGKIRVE
KPVVMEADGSVERLYPNDARLRNLTYASPIKLEMSIVDRGEEKEPVEAMIGMLPIMVMSK
VCNLYGMSEEEMVSYGEDPLDPGGYFIVNGSERVIMTLEDLAPNKILVEYNQRYDEFIEV
AKVFSQRQGYRSLVIVERGKRSILEVSFPSVAGRINFVTLVRALGLETDMDIVKAVSDNP
EIMKFMLENLEEAEVSTTEEALEKIGNRVAAGQAKEYQKKRAAYVLDRYLLPHIGVEEKD
RYAKALFLSRMAEACFELALGKRGEDDKDHYANKRLKLSGDLMEDLFRVAFNRLTRDIKY
QLERASMRNRELNVITTVRADVLTERMIHPLATGNWVGGRTGVSQLLDRTDYMASLSHLR
RVISPLSRSQPHFETRDLHATQWGRICPSETPEGPNCGLVKNFAQGVELSKGVEDYEEVK
TMLINLGVRPVGGYGG
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
ttgctggacagaagcgttctttacagggcctattttaccaaggacaagttggtgcaccac
cacataaattcattcaacgaattcatagacagaggtctgcagaaggttatcgatgaggtc
aggataatagagacgaacatcgagaacacctacgtcaagctcggcaagatcagggtggag
aagcctgtggtcatggaggctgacggatctgtcgagaggctctatccgaacgatgcccgt
ctcaggaacctgacctatgcgtcgccaataaagctcgagatgtccatagtcgacaggggc
gaggagaaggagccggtcgaggcgatgatcggcatgctcccgatcatggtgatgtcgaag
gtctgcaacctctacggcatgagcgaggaggagatggtctcctacggagaggatcccctc
gatcctggaggatactttatagtgaacggatccgagcgcgtcataatgacgctcgaggat
ctggcgccgaacaagatactcgtggagtacaatcagaggtacgatgagttcatagaggtt
gcgaaggtcttcagccagaggcagggctacaggtctctcgtcatagtggagcgcggcaag
cgatcgatactagaggtctcattcccgtctgtcgctggcaggataaacttcgtgactctt
gtaagagccctcggactcgagactgatatggacatagtgaaggccgtatcagataacccc
gagatcatgaagttcatgctcgagaacctcgaggaggctgaagtctcgacgacagaagag
gccctggagaagataggcaacagggtcgcggccggccaggcgaaggagtaccagaagaag
cgtgccgcttatgtcctggacagatacctgcttccgcatataggagtggaggagaaggac
aggtacgctaaggctctcttcctctcaagaatggctgaggcgtgcttcgagctggcgctt
ggtaaaagaggagaggacgacaaggaccactatgcgaataagaggctgaagctctccgga
gacctgatggaagatctcttcagggtcgcattcaacaggctcaccagggatatcaagtac
cagctcgagcgcgccagcatgcgcaacagggagctgaatgtcatcaccacagtgagagcg
gatgttctgacggagaggatgatacatcctctcgcaacaggcaactgggttggtggcagg
accggcgtatcgcagcttctggatagaacggattacatggcgagcctgagccatctcagg
agggtcatatcgccgctatcgagatcgcagccgcactttgagaccagggatctccatgcg
acacagtggggaaggatatgcccgagcgagactcccgaggggccgaactgcgggctggtc
aagaacttcgctcagggagttgagctctcaaagggcgttgaggattacgaagaggtcaag
accatgctgatcaatctcggtgtgaggccggtaggtggttatggtggctga
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