Medicago truncatula (barrel medic): 11419142
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Entry
11419142 CDS
T01716
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00906
Carotenoid biosynthesis
mtr01100
Metabolic pathways
mtr01110
Biosynthesis of secondary metabolites
Module
mtr_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
11419142
Enzymes [BR:
mtr01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
11419142
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
FAD_oxidored
Thi4
HI0933_like
Pyr_redox_3
NAD_binding_8
FAD_binding_2
Trp_halogenase
Pyr_redox
FAD_binding_3
GIDA
TrkA_N
XdhC_C
Motif
Other DBs
NCBI-GeneID:
11419142
NCBI-ProteinID:
XP_003625025
UniProt:
A2Q2Y6
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Position
7:42272019..42273990
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AA seq
501 aa
AA seq
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MIKMDTLLKTPNKLQFLHPLHGYSEKLSHFSASDKLQNHVVRFSSKKKPVLRASSSALLE
LVPEFKKENLDFELPLYDSTKGTVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLI
WPNNYGVWVDEFEAMDLLDCLDKTWSGAVVYIDDKTKKDLDRPYGRVNRKLLKSKMLQKC
IANGVKFHQAKVIKVIHEESKSMLICNDGVTVQATVVLDATGFSRCLVQYDKPYNPGYQV
AYGILAEVEEHPFDVDKMLFMDWRDSHLDNDLKLKERNSKIPTFLYAMPFSSTKIFLEET
SLVARPGLRMDDIQDRMVARLKHLGINVKSIEEDEQCVIPMGGPLPVLPQRVVGIGGTAG
MVHPSTGYMVARTLAAAPIVANAIVQYLGSDRGLLGDEVSARVWKDLWPIERRRQREFFC
FGMDVLLKLDLPGTRRFFDAFFNLEPHYWHGFLSSRLYLPELFTFGLSLFSYASNTSRLE
IMAKGTLPLVNMVNNLIQDKE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaatggatactttactcaaaacaccaaacaagcttcaatttttacacccactt
catggttattcagaaaaattgagtcatttttcagcttcagataagttgcaaaaccatgta
gttagatttagttcaaagaaaaaaccagttttgagggctagtagcagtgcccttttggag
cttgttcctgaattcaagaaggaaaatttggattttgaacttcctttgtatgattcaaca
aagggaactgttgtggatcttgtagttgtgggaggtggtcctgcaggtcttgctgtagca
cagcaagtttctgaggcagggctttctgtttgtgctattgatccaaaccctagattgatt
tggcctaataattatggtgtttgggtggatgaatttgaggccatggatttgcttgattgt
cttgataaaacttggtctggtgctgttgtttatatcgatgataaaacgaaaaaggattta
gatagaccttatggaagggttaataggaagcttttgaagtcgaagatgctgcagaaatgc
atagcaaatggtgttaagtttcaccaagctaaggttatcaaggttattcatgaggaatcc
aaatcgatgttgatttgtaatgatggtgtcacggttcaggctactgttgttcttgatgcc
actggcttttcgagatgtctggtccagtatgataaaccgtataatcccggttatcaggtt
gcgtacgggattttggctgaggttgaagaacacccttttgatgttgataaaatgcttttt
atggactggagagattcgcatctagacaatgacttgaagctcaaggagagaaatagtaaa
atacctacatttctgtatgcaatgcccttttcgtcaaccaagatatttctcgaagaaacc
tctcttgtagcgcgccctgggttacggatggatgatatacaggacagaatggttgctaga
ttgaaacatttggggattaatgtgaaaagcattgaagaagatgagcagtgtgtgattccc
atgggtggccctctcccagttctccctcaaagagttgttggaatcggtggtacggccggg
atggtgcatccttcaactgggtatatggtagcaagaaccctggctgcagctcctattgtt
gccaatgctattgttcagtatcttggttctgatagaggtcttttaggagacgaagtatct
gcacgggtatggaaagacttatggccaatcgaaaggagacgacaaagggagttcttctgt
tttggtatggacgtcttactcaagcttgatttacctggcacaaggagatttttcgatgca
ttttttaatctggaacctcactattggcatggattcttatcatcaagactgtatcttcct
gaactctttacttttggattgtctctattttcttatgcttcaaatacatctaggctagag
ataatggctaagggaactcttcctttggtaaatatggtcaacaacttgatacaagataaa
gaataa
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