Medicago truncatula (barrel medic): 11432526
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Entry
11432526 CDS
T01716
Name
(RefSeq) DNA mismatch repair protein MSH6
KO
K08737
DNA mismatch repair protein MSH6
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
11432526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11432526
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
11432526
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PTM_DIR17_Tudor
DUF2457
Motif
Other DBs
NCBI-GeneID:
11432526
NCBI-ProteinID:
XP_003625965
UniProt:
G7KST2
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Position
7:complement(51767009..51775456)
Genome browser
AA seq
1280 aa
AA seq
DB search
MSRRNSNGRSPLVNPQRQITSFFTKSTSPLSPSLSKTLKSNPNNPISKSNPNPSPTLTTP
SPLNPNKPHKPRLVIDAPPTISPPPSDSPFIGKRIRVYWPLDEAWYEGTVKSFDTVTSKH
RIRYDDDEEESIDLSKEKIEWIQDSSSKKLKRLRRGSSPIRKMVIEVEECPKEEKQEEED
DDDDNDDSEDEDWGKNAVLENVVDDNDDEDMELEEENEVVESAKGKNSNKVEPKKRKLGG
GAKMEPMKKSKSGNEVNRVAVKLSPLAPLNNLEVRKTSDGADNVATGDSSERFALREAQK
FHFLGKDRRDAKRRRPGDENYDSRTLYLPPDFVRNLSGGQKQWWEFKSKHMDKVLFFKMG
KFYELFEMDAHVGAKELELQYMRGEQPHCGFPEKNFTVNVERLARKGYRVLVVEQTETPE
QMELRRKESGSKDKVVRREICAVVSKGTLIDGEFMSTNPEAAYLMALTEYCENNPNEMSE
RTYGVCVVDVATSRVILGQFNDDSECSALCSILSEIRPVEIVKPAKLLSAETERALLKHT
RNPLVNELIPNVEFWDADKTLDHLKRIYGHNNDVSAQDGGLDCLPDVLVELVKTDHDSRS
ALSALGGALYYLKQAFLDEQLLRFAQFELLPCSVFSGLASKPYMVLDAVALENLEIFENS
RNGESSGTLYAQLNQCVTAFGKRLLKSWLARPLYHVESIKERQEAVAGLKGVNLPHTLEF
RKALSKLPDMERLLARVLSSRDASGRNANKVVLYEDSSKKQLQEFISALRGLELMAQACL
SLGVILNNVKSRQLSHLLTPGKGLPDVSMDLNHFKDAFDWVEANNSGRIIPHEGVDKEYD
SAGKAVNEIESSLLDHLKEQRKLLGSTSISYVGIGKDTYLLEVPENLSQNIPRDYERRSS
KKGFVRYWTPDIKIFLKELSHAESERETLLKSTFQRMIERFCEHHTQWKQLVSATAELDV
LINLAIASDYYEGPTCRPSFVGTLCTNEAPYIYAKSLGHPVLRSDTLGKSAFVPNDITIG
GPDQASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPSESFELSPVDRIFVRMGARDN
IMAGQSTFLTELSETATMLSSATRNSLVALDELGRGTSTSDGQAIAESVLEHLVRSVQCR
GLFSTHYHRLAIDYLKDPKVCLAHMACQVGSGNEGLDEVTFLYRLSAGACPKSYGVNVAR
LAGLPTSVLQKADAKSREFEATYGKYRTEPNSSNQSWVDEIIVLVQKLNNAANNLSCEEM
VSDHSIVKLQREARELLERC
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtcgtaatagcaatggtagatcacccctcgtcaatccacagcgtcaaatcact
tctttcttcaccaaatccacttctcccctttcaccttctctctccaaaaccctaaaatca
aaccctaataaccccatttctaaatctaatcctaaccctagtcctaccctaactacacct
tcacctctcaatcccaataaaccacacaaaccccgtctcgtcatcgacgctcctcctaca
atatcacctcccccttcggattctccattcattggtaaacgaatcagggtttattggcct
ttagacgaagcctggtacgaaggtactgtcaaatctttcgataccgttacttccaaacat
cgaattcgttacgatgatgatgaagaggaaagtattgatctttctaaggagaagattgag
tggattcaggattcttcctcgaagaagcttaaacgcttgcggcgtggttcttctcctatt
aggaagatggtgattgaggtggaagaatgtcccaaagaggaaaaacaagaagaagaagat
gatgatgatgataatgatgattcggaagatgaagattggggaaaaaatgctgtattggag
aatgttgtggatgataatgatgatgaagatatggaactggaggaagaaaatgaagttgta
gagagtgctaaaggaaagaatagtaataaggttgagccgaaaaagcggaaactaggcgga
ggagcaaaaatggagccgatgaaaaagagcaagagtggaaatgaagttaacagggtagct
gttaagctctcaccattggcgcctttgaataatttggaggttagaaagacatctgatggc
gcagacaatgttgcaactggtgattcctctgaaagatttgcgctccgcgaagctcagaag
tttcactttctaggaaaagatcgcagggatgccaaacgaaggcgtccaggagatgaaaat
tatgactcaagaactctctacttgcctccagattttgtgaggaatttgtcaggtggccag
aaacaatggtgggaattcaagtcaaaacacatggacaaagttttgtttttcaagatgggt
aaattttatgagctttttgaaatggatgcacatgtaggagcaaaagagcttgaattgcag
tatatgaggggagagcaacctcattgtggttttccagagaagaatttcacagtgaatgta
gagagactagctagaaagggttatcgagttcttgttgtagagcagactgaaacacctgaa
cagatggagcttcggcgcaaggagagcggctctaaagataaggttgtgagacgggaaata
tgcgcagtggtttcaaaaggcacattaatagatggggagtttatgtcaaccaatcctgaa
gctgcatatttaatggcactgactgagtactgtgagaacaatccaaatgaaatgtcagag
cgcacgtacggtgtttgtgtagttgatgtcgctactagcagagtcattcttgggcagttc
aacgatgactcagagtgcagtgccttgtgctctatcttgtctgagatcaggccagttgaa
attgtgaaacctgctaaactactcagtgctgaaacagaaagggcactgctgaaacacacg
agaaaccctctagtgaatgagttaattccaaatgtggaattctgggatgctgataaaact
ttggatcatctgaagagaatttatggccacaataacgatgttagtgctcaagatggcggg
ttagattgtctgccagatgttttagtggagctggtgaaaacagatcatgacagtagaagt
gcactctcagcacttgggggtgctctctattatttgaaacaggctttcctagatgagcag
ttgcttagatttgcgcagtttgagttgcttccatgttctgttttcagtggtcttgcttca
aaaccatacatggttcttgatgctgtagccctagagaatctcgagatatttgagaatagc
agaaatggagagtcttcaggcacgctctatgctcaattaaaccaatgtgttacggcgttt
gggaagagactgctaaagtcatggcttgcaagaccgttatatcacgtggagtcaataaag
gaacgccaggaagctgttgctggtttaaagggagtaaatctacctcacacattagaattt
cgaaaagcattatcaaagttacctgacatggagcggttgctggcacgggtgctctcttct
agggatgctagtggaaggaatgctaataaagtggttctgtatgaggattcatcaaagaaa
caactgcaagagtttatttcagccctgcgtggtcttgaacttatggcacaagcttgcttg
tcactcggtgttattttgaataatgtcaaatccagacagcttagtcatcttttaacacct
ggtaaaggtcttcctgatgtaagcatggatctgaatcatttcaaggatgcctttgattgg
gtggaagccaataactccggccgtataatacctcatgaaggagttgacaaagaatatgat
tcagctggtaaggcagttaatgagattgagtccagtttgttagatcatctcaaggaacaa
aggaaattacttggaagcacatcaatctcttatgttggtattggaaaggacacataccta
ttggaagtgcctgaaaatttgtctcagaatattcctcgggattacgagaggcgttcatcc
aaaaaaggtttcgttaggtattggactccagatattaaaatatttttgaaagagctctct
catgctgaatctgaaagggagaccttattgaaaagtacatttcagagaatgatagagcgt
ttttgtgaacatcacactcagtggaagcagttggtgtctgcaactgctgagttggatgtt
ttgatcaatttagctattgccagtgattactatgaaggaccaacctgcagaccaagtttt
gttgggaccttatgtacaaatgaagctccctacatctatgctaaaagtctgggacacccc
gttcttaggagtgataccttaggaaagagtgcctttgtacctaatgacataaccataggt
ggtccagaccaggcctcctttattcttcttacaggtcctaacatgggtgggaagtcaact
cttcttcgccaagtttgcttggctgtgattttggcccaggtaggggctgatgtcccttca
gaaagttttgaattgtctcctgtggaccgaatttttgttcggatgggtgccagagataat
atcatggctggccaaagtacatttttaaccgagctttcagaaactgcaacaatgctgtca
tcagccactcgtaattcattggtggctctggatgagcttgggcgtgggacctcaacgtct
gatggacaagccattgcggaatcagtattagaacatcttgtacgtagcgtgcagtgtcgt
ggattgttttctacacactatcatcgattagctatagattatctcaaagatcccaaggtc
tgtctcgctcacatggcatgccaagttggtagtggaaatgaaggtttggacgaagtcacc
tttctttacaggctgtccgcaggtgcttgccccaagagctacggtgttaatgttgctcgg
ttagctggactacccacttctgtgcttcagaaggctgatgccaagtccagagaatttgag
gccacgtatggtaaatacagaactgaaccaaactcttccaatcaaagttgggttgatgag
ataatagtcttggtacaaaaattgaacaatgctgccaataatttgagttgcgaggagatg
gtttccgatcactctatagtaaagcttcagcgtgaagcaagagaactgctagaacgatgt
taa
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