KEGG   Medicago truncatula (barrel medic): 11436034
Entry
11436034          CDS       T01716                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    11436034
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtr03021]
    11436034
Enzymes [BR:mtr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     11436034
Transcription machinery [BR:mtr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     11436034
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77
Other DBs
NCBI-GeneID: 11436034
NCBI-ProteinID: XP_003603295
UniProt: G7J9U6
LinkDB
Position
3:complement(52329554..52336971)
AA seq 1188 aa
MEHIGSSKDANNTNYTEMDIDLDDDEDQSNAEILNELGDDMVKYFCKKASVMFFDQYGLI
SHQINSYNQFINSGLQSAFDSFGDLTVTPGFDPSKKGADEHYRYATVKFGKVTLERPKFW
CGEGNAQELKMLPRHARLQRMTYASKMKVDVHIQVYVMKKVRSDKFKTGKEEYIDKDIKW
EDTREITIGRLPVMVKSDLCWMSEAEKGDCEFDHGGYFLIKGAEKIFIAQEQIFLKRLWV
SNIPYWAVAFKSQMKRNRMVVKLVEGSTEGITNGEKLLTVYFLSVEIPVWILFFALGVTS
DKEIVDLIDYGEANGRIENILFASIREADDKCEAFRRGKNALLFLEERVKGVQFPPAESI
DECFNMYVFPNVKGLKRKARYLAYMVKVLLLAYTGRRKTDNRDDFRNKRLELAGELLERE
IKVHFAHARKRMGKALQRDLYGEREVRQIEHYLDASIITNGLQRAFSTGAWTHPFKRMER
ISGVVATLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGL
VKNLAVTGVVSTDVTESILPQLSDCGMEELVDDTTTVLGKKDKVFLNGDWVGVCSDSISF
VAELRTRRRRNELPHQVEIKRDQCQQEVRILSDAGRILRPLLVVSNLLKIKGSKSEHKSF
QSLLDNGVIELIGPEEEEDFKTAWGVQYLFGKEGKSSVKYTHCELDMSFLLGLSCSLVPF
ANHDHARRVLYQSQKHSSQAIGFATTNPNIRVDALSHQLFYPQRPLFQTMTSDCLGKPGY
LGQSKVVPKSEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKAEIEN
KESSEKRKKPEDIVNFGKIQSKIGRVDSLDDDGFPFVGANLQSGDIIIGRCADSGTDHSI
KLKHTERGYVQKVVLSSNDEGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENF
PFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACVGSLRNATPFSTSSVEAITDQL
HRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPV
ADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKNVANVILRPVSG
GRKIRGPYCRFCESADDIVVASVPYGAKLLSQELFSMGINLKFETELC
NT seq 3567 nt   +upstreamnt  +downstreamnt
atggaacacataggttcaagcaaagatgctaacaacaccaactacacagaaatggacatt
gaccttgacgacgatgaagatcaatccaacgccgaaatcctcaacgaactcggcgacgat
atggtcaaatacttttgcaagaaagcttccgttatgttcttcgaccaatacggtttaatc
agtcaccaaatcaactcgtacaatcaattcatcaattcgggtcttcaaagcgctttcgat
tccttcggtgatctcactgttacgcctggttttgatccttctaagaaaggtgctgatgaa
cattaccgttatgctacggttaagtttgggaaggttacgcttgagcgacctaagttttgg
tgtggtgaagggaatgctcaagagttgaagatgcttcccagacatgccaggttgcagagg
atgacttatgcttctaagatgaaagttgatgttcacatccaggtatatgttatgaagaag
gttcggagtgataagtttaagactgggaaagaagaatacattgataaagatattaaatgg
gaggatacgagggaaataactattgggagactgcctgttatggtcaagtctgatctgtgt
tggatgagtgaagctgagaaaggtgattgtgaatttgaccacggaggctactttctgatt
aagggtgctgaaaagatttttatcgcacaagagcaaatatttctgaagaggctctgggtt
tcaaatattccatactgggctgttgctttcaagtcgcagatgaagagaaataggatggtt
gttaaattggtggaaggttcgacggagggaattacaaacggagagaagctgctcacagtg
tattttctgtctgtagagatacctgtatggatattgttttttgctcttggtgtcacatca
gataaagaaattgttgatctcatcgattatggagaggcaaatggaagaattgaaaacatt
ctctttgcatccatccgtgaggcagacgataaatgtgaagcatttcgtaggggaaagaac
gctcttcttttcttagaggaacgtgtaaaaggtgtacaatttccacccgcagaatctatt
gacgagtgctttaacatgtatgtttttccgaacgttaaaggattaaaaagaaaggcaagg
tatctagcttacatggtgaaggttcttctactagcatatactggccgccgaaaaactgat
aacagggacgattttcgaaacaagaggcttgagttggctggtgagctgctggagcgtgag
attaaagtgcactttgcacatgctaggaagcgaatggggaaggctctgcagagagacctt
tatggagaacgagaagttcgtcaaattgagcactatcttgacgcttccattattacaaat
ggtctccaaagagcgttttctactggagcttggacacatcctttcaaaaggatggaaagg
atttctggtgtggttgcaactcttgggcgaaccaatccattacaaaccatggctgaatta
agaagaacaaggcaacaagttcagtacacaggaaaggtcggggatgctagatacccgcat
ccttctcactggggtaaggtttgttttctttccaccccagatggtgaaaattgtggactt
gtaaaaaatttggctgtcacaggagtagtaagtaccgatgtaactgaatccatacttcct
cagctgtccgattgtgggatggaagaacttgttgatgatactacaactgttctggggaaa
aaagacaaagtcttcctaaatggggactgggttggagtttgttcagattccatatcattt
gtggcagagctacgaactagaagacggaggaatgagttgcctcatcaggtggaaatcaaa
agagatcagtgtcaacaagaagtgcgcatattatctgatgcaggaaggattctccgtcca
ctcttggttgttagtaatctgctcaagattaaaggatctaagtctgagcataaatctttc
cagtccctattggataatggcgtgattgagctgattggtcctgaagaagaagaggacttc
aagactgcttggggtgttcagtatttgtttggcaaagagggaaaatcttctgtgaagtac
acacattgtgaacttgatatgtcattcttattaggtctaagctgctcacttgttccattt
gcaaatcatgaccatgctaggagagtgttgtaccaatcccagaagcattcttctcaggct
attggctttgctacgacaaacccaaatataagagtcgatgctttgtctcaccaactgttt
tatccacagagaccactctttcagacaatgacatctgattgtcttggaaaacctggatat
cttggtcagagtaaagttgttccaaagtctgaattctataatgggcagaatgcaattgtg
gctgtcaatgtgcatctcggatataatcaagaagattcgttggttatgaaccgtgcttcg
ttgcagcgcggcatgttcagatctgagcatataaggagttacaaagctgaaattgagaat
aaggaatcttcagaaaagagaaagaaacctgaagacattgttaattttggaaagatacag
agtaaaattggccgagttgatagccttgatgatgatggctttccatttgttggagcaaat
ttgcaaagtggtgatattatcatcgggcggtgtgctgattccgggacggaccatagtata
aagctaaagcacaccgaaaggggttatgttcagaaggttgtgctgtcttcgaatgatgag
gggaagaattttgctgttgtttcgctgagacaggttaggagcccagttcttggagataag
ttctccagtatgcatggacagaagggtgttttgggatttctggagtctcaagaaaatttt
cccttcacaaaacaaggcattgttccagatattgttataaatccacatgcatttccctcg
cgacaaactcctggacaactactagaggctgctttgggaaagggcatcgcttgtgttggt
tcactgaggaatgctactcctttctccacttcctctgttgaagccattactgaccagctt
catagagctggcttttcaagatgggggaacgaacgagtatacaacggaaggaccggtgag
atggtccgatcgctaatatttatgggcccaacattctaccagcgactgcaccacatgtcc
gaagacaaagtcaaattcaggaacactggcccagttcacccgctgacccgacagcctgtc
gctgacaggaagcgatttggaggtatcaagtttggtgagatggagcgtgattgcctgata
gctcatggtgcttcagcaaatttgtatgaacgcctcttcaccctgagtgattcgtctcag
atacacatttgtagtaaatgcaagaatgttgcaaatgtgatcttgcgaccggtatctggt
ggccggaagattcgaggtccgtattgccgtttctgtgaatcagccgatgacattgtggtg
gccagtgttccatatggagcaaagttattgtctcaggagctgttcagcatgggcattaat
ctcaaatttgaaactgagctttgctag

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